Megalobrama amblycephala (Wuchang bream): 125260163
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Entry
125260163 CDS
T08212
Symbol
dhx35
Name
(RefSeq) probable ATP-dependent RNA helicase DHX35
KO
K13117
ATP-dependent RNA helicase DDX35 [EC:
5.6.2.6
]
Organism
mamb
Megalobrama amblycephala (Wuchang bream)
Brite
KEGG Orthology (KO) [BR:
mamb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
mamb03041
]
125260163 (dhx35)
Enzymes [BR:
mamb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
125260163 (dhx35)
Spliceosome [BR:
mamb03041
]
Complex C
Other components
Complex C specific factors
125260163 (dhx35)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
Helicase_C
HA2_N
DEAD
AAA_22
ABC_tran
Cas3-like_C_2
AAA_30
AAA_29
AAA_19
nSTAND3
AAA_23
Motif
Other DBs
NCBI-GeneID:
125260163
NCBI-ProteinID:
XP_048034340
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Position
LG24:30173386..30195251
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AA seq
698 aa
AA seq
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MAAPHTTMKFWKPGSEAPGVCEERDLSTETTGSPIIFNPHTALSIEKQRQRLPVFKHRNN
ILYLVESFQTVVIVGETGSGKSTQIPQYLLEAGWAAEGKVIGVTQPRRVAATSVASRVAE
ERGAFLGHEVGYTIRFDDCSDPHATRIKFLTDGMLVREMMSDPLLKKYSVLMLDEAHERT
LYTDIAIGLLKKIQKKRRDLRLIVASATLDAKKFQDFFNLNESGDPNKDTCGILTVEGRT
FPVDIFYTVSPVPDYVKATVETVLKIHETEEDGDVLAFLTGQEEVEKVVSLLQEQARTLS
RYGMKKHLCVLPMYAGLPYSEQMRVFERMPPTVRKVVVATNIAETSITINGVVFVIDCAF
VKLRAYNPLTAIESLIVTPISKASACQRAGRAGRNRAGKCFRLYTEEDFEKLPASTVPEM
QRSNLAPVILQLKALGIDNVLRFSFLPPPAQSMVQALELLFALGGLDQYGRLTDPMGVRM
AEFPLTPMFAKMLLESGNFGCSKEIVTIAAMMQIQNLFTVPHNQKKAAAREHRKFAVAEG
DHLTMLNVYEAFIKHQKSSQWCQDHFLNYKGLLRAVAVREQLRHLLNKFKVPRTSSEGDP
DVILRCIVSGFFANAARMHHSGSYRTLRDDRELYIHPDSVLYGEKPPKWVVFNEVVQTSK
YYMRDVTAVESSWLVELAPHFYKQAKHGSLNSKRTKVF
NT seq
2097 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgccccacaccaccatgaaattctggaaacccggctcagaggctccgggtgtg
tgtgaggagagagacctgtccactgagaccaccggctctcccatcatctttaacccgcac
acggctctctccatagagaaacagaggcagaggctgcccgtcttcaagcacagaaacaac
atcctctatctggttgagagtttccagactgtggtgattgttggagaaacaggatctgga
aaaagcacacaaattccacagtatctgctggaggctggatgggcggcagaagggaaggtg
atcggagtgactcagcctcgacgggtggcggccacatctgtggccagtcgtgtggcagag
gagagaggggcatttcttgggcacgaggtgggctacaccatcaggtttgatgactgctct
gacccgcacgccactcgtataaagtttctgacagatgggatgttagttcgggagatgatg
tctgacccgctgttaaagaaatacagtgtgttaatgctggatgaagctcatgagagaacg
ctgtacacggacattgccatcggccttctgaagaagattcagaagaagaggcgagacctg
cgtctgattgtagcctcggccactctggatgccaagaaatttcaagatttcttcaaccta
aatgagtctggagacccaaataaagacacctgtggcattctgacggttgagggccgaact
ttccctgtggatattttctacactgtcagtcctgtaccagactatgtgaaggctacggtg
gaaaccgtgctgaagatccacgagacagaggaggatggagacgtgctggcgtttctcaca
ggacaggaggaggtggagaaggtggtgtctctgctccaggaacaggcccgaactttgtcc
cgctacgggatgaagaagcacctgtgtgtgctgcccatgtacgcaggcctgccctacagc
gaacagatgagagtatttgagaggatgccccctactgtcagaaaggtggtggtcgcaacc
aatatagccgagacatccatcaccatcaacggtgtagtgtttgtgattgattgtgcattt
gtcaagctgagggcgtataatccactaacagcaatagagtcactgatcgtcacgcccatc
tctaaagcctctgcctgtcagagagccggaagagccgggcggaaccgcgcagggaagtgc
ttccgtctctacacagaggaggactttgagaagttgcccgcgtctacagttccagagatg
cagcgctctaatctggctccagtcattctgcagctgaaagctctgggcatcgacaatgtg
ctgcgattcagcttccttcctcctcctgctcagtccatggttcaagccctggagctgctc
ttcgctcttggaggtctggatcagtacgggcgtctcactgacccgatgggtgtgcgaatg
gccgagttcccgctcactcccatgtttgccaagatgctgctggaatcaggaaacttcggc
tgctccaaggagatagtcaccatcgcagccatgatgcaaattcaaaaccttttcacggtg
ccacacaatcagaagaaagcagctgcgcgggagcacaggaagtttgctgtggctgagggg
gatcatctcaccatgctgaatgtttatgaggctttcataaagcatcagaagagttctcag
tggtgtcaggatcatttcctcaactataaaggtctcctccgcgctgtggccgtacgggaa
cagctgcggcacctcctcaacaagtttaaggtgcctcggacgtccagtgaaggtgatccg
gatgtgattctcagatgtattgtgtcgggtttttttgcgaatgccgcccgtatgcatcac
tccggctcctacaggactctacgtgacgacagagagctgtacatccaccctgactcggtg
ctgtatggagaaaagcccccaaaatgggtcgtcttcaacgaggtggttcagaccagcaag
tactacatgcgggacgtgaccgcagtcgagtcgtcctggctggtggagttggctcctcac
ttttacaaacaggccaagcacgggtctctgaacagcaaacggaccaaagtcttctga
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