Megalobrama amblycephala (Wuchang bream): 125260232
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Entry
125260232 CDS
T08212
Symbol
slc6a1a
Name
(RefSeq) sodium- and chloride-dependent GABA transporter 1a
KO
K05034
solute carrier family 6 (neurotransmitter transporter, GABA) member 1
Organism
mamb
Megalobrama amblycephala (Wuchang bream)
Pathway
mamb04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
mamb00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
125260232 (slc6a1a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
mamb02000
]
125260232 (slc6a1a)
Transporters [BR:
mamb02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
125260232 (slc6a1a)
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Gene cluster
GFIT
Motif
Pfam:
SNF
Motif
Other DBs
NCBI-GeneID:
125260232
NCBI-ProteinID:
XP_048034436
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Position
LG24:complement(22954545..22968368)
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AA seq
681 aa
AA seq
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MATNNTKNTDGQVVTELNEITTNDKPKSEDAKPEKKKKDIPARETWGGRFDFLLSCVGYA
IGLGNVWRFPYLCGKNGGGAFLIPYFLTLVFAGVPLFFLECALGQYTSIGGLGVWKLAPM
FKGVGLAAAVLSFWLNIYYIVIIAWALYYLYNSFTTELPWKTCNNPWNTERCYTNYSIVD
TTNLTSAVMEFWERNVHQMTDGLEKPGEIRVPLAITLAIAWVLVYFCIWKGVSWTGKVVY
FSATYPYFMLFILFIRGVTLPGAKEGILFYITPDFQKLKESEVWLDAATQIFFSYGLGLG
SLIALGSYNPFNNNVYRDSIIVCCINSFTSMFAGFVIFSIVGFMAHVTKRPIAHVAASGP
GLAFLAYPEAVTQLPVSPLWAILFFSMLLMLGIDSQFCTVEGFITALVDEFPRLLRNRRE
IFIACVCIVSYAIGLSNITQGGLYVFKLFDYYSASGMCLLFLVFFECISISWCYGVNKFY
DNIQEMIGYKPCLWWKLCWVFFTPLVVAGVFLFSAVQMVPLTMNNYVFPKWGQGVGWLMA
LSSMVLIPGYMGYMFLTLKGTYKERLRIMLQPPAVRRAQENGPEQQQPQSQPQLPEQSPQ
SAQPQSPQPQSPQPQSPQQPQQPDQAPQQPQSPQQPQSPQQPPQPQPQPQPQPQPQPQPQ
SQPPVQADSSSPTNPGNDANV
NT seq
2046 nt
NT seq
+upstream
nt +downstream
nt
atggcgacaaacaacaccaaaaacaccgatggacaagttgtgacggaactcaacgagatc
acaactaacgacaaacccaaatcagaggacgccaaaccggagaagaaaaagaaagacatt
ccagccagagaaacttggggtgggagatttgattttctcctgtcatgtgtgggctacgcc
atcggcctgggcaacgtgtggagatttccatatctgtgcgggaaaaacggcggaggggct
ttcttgattccttattttttgacgctagtttttgcgggagttcctctattttttcttgaa
tgcgctcttggacaatacacttccattggtggccttggggtatggaaactagctccaatg
ttcaaaggtgttggtcttgcggctgctgttctctcattctggctgaacatttactacatt
gtcatcattgcctgggccctgtactacttatacaactcctttaccactgagcttccatgg
aaaacgtgtaacaatccatggaacactgagagatgttatacaaactacagcatagtagac
accaccaatctcaccagtgctgtcatggagttttgggaacgcaatgtgcatcaaatgact
gatggcttagaaaaacctggtgaaattcgtgttccacttgcaataacactggccattgcc
tgggtcctcgtgtacttctgtatctggaaaggtgttagctggactggaaaggttgtttac
ttctctgccacctacccctacttcatgttgttcattttgtttatccgtggagtgaccctg
cctggggctaaagagggaatcttgttctatatcactcctgattttcagaagctgaaggag
tctgaggtttggctggatgctgcaacacagattttcttctcctatggtttgggtctaggc
tcccttattgctctgggcagctacaacccttttaataacaatgtgtacagggattctatc
atcgtgtgctgtataaattccttcactagtatgtttgctggatttgtgattttctctatt
gtgggcttcatggcacatgtgacaaagagaccaattgctcatgtagctgcatctggtcct
ggtttggcatttttagcttatccagaagctgtgacgcagttgcccgtctcaccattgtgg
gctattctcttcttctccatgctgctgatgctgggaatcgacagtcagttctgcacagtg
gagggcttcatcactgctctggtggatgagttcccacgactgctcaggaacaggagagag
attttcattgcatgtgtttgcattgtgtcctacgccattgggctgtccaatatcacacag
ggtggcctgtatgtgtttaaactcttcgactattactcagccagcgggatgtgtctgctc
ttcctggtgttctttgagtgtatctcaatctcctggtgctatggtgtgaacaagttttat
gataacatccaggaaatgattggatacaagccttgtttatggtggaaactgtgctgggtt
ttcttcacccctctagttgttgctggtgtgttcctcttcagcgcggtgcaaatggttcct
cttacaatgaacaactatgtgttccctaaatggggccaaggagtgggctggctcatggct
ttatcctctatggttctcattcctggttatatgggctacatgttcctcaccctgaagggg
acatataaggagcggctcaggataatgctgcagcctccagcagtgaggcgtgctcaggag
aacgggccggagcaacagcagcctcagtcacagccacagctgccggagcaatcaccgcag
tcagcgcaaccgcagtcaccgcaaccacagtcaccacaaccgcagtcaccgcaacaaccg
cagcaaccggaccaggcaccgcagcaaccacaatcaccgcaacaaccacaatcaccgcaa
caaccaccgcagccgcagccgcagccgcagccacaaccacagccgcagccgcagccgcag
tctcagccaccagtgcaggctgatagttcatctccaactaaccctggcaacgacgccaat
gtctaa
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