Megalobrama amblycephala (Wuchang bream): 125260288
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Entry
125260288 CDS
T08212
Name
(RefSeq) polycomb protein SCMH1-like isoform X1
KO
K11465
sex comb on midleg-like protein 2
Organism
mamb
Megalobrama amblycephala (Wuchang bream)
Pathway
mamb03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
mamb00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
125260288
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
mamb03036
]
125260288
Chromosome and associated proteins [BR:
mamb03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Canonical PRC1 (PRC1.2/1.4)
PRC1.4 specific proteins
125260288
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MBT
SLED
RBR
SAM_1
SAM_2
Motif
Other DBs
NCBI-GeneID:
125260288
NCBI-ProteinID:
XP_048034551
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Position
LG24:complement(3157442..3186853)
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AA seq
720 aa
AA seq
DB search
MVSMGRTVLKDHKDSKKDKAGRSMSLTGPGPVKVTESFSWEEYLKETSSVPAPPSCFRQS
QFPPSNDFKAGMKLEARDPRNSTSTCIATVMGLMGVRLRLRLDGSDNTNDFWRLVDSADI
QPIGTCEKNGDMLQPPLGFRMNASSWPMFLLRTLNGAEMAPATAFKKEPLRPPHNGFKPG
MKLEAVDKKNPYLICPATIGEVKGEEIFVMFDGWRGAFDYWCRYDSRDIFPVGWCAATKH
GLQPPGNSITAPKPGPTPSSSSNPKPPRRSMPSPYRLPTPLPQLPVRKGIRGRRPKSETI
ALLKALAASTAAQDTEDPGGATPQTTPISQLPLRPYKKRGPKPGSKRKSRLLHRSMSIAA
SSDSRVPMTQMPSDGLSSLGSPSSVVSTVCVYVNKHGNCGPQLDRKRVQRLPDHFGPEAA
NLVLQQTVQACLDCAYQPKVLLGCLQSQGGGGEVVRVRTDGGTRLVKLPSASSAGCVLRF
LELVCRHLLCDNLFSSQPFSPHSTYDRGKSVKEEMMSDGPSLNRAVKRISRDSPPYCAPL
SPKLLHTDTHPSEAETLPPEENGLLKEQRFMDSASNSMTPRPQTLRSTSEYQSPPSSPYY
HGNGPPLRRQASNPPTQTHRRVEAASSTTGPEAAAAAERGVPRTPGRSPSSWSIEEVMQF
VRDADPAALAPHAELFRKHEIDGKALMLLRSDMVMKYMGLKLGPALKLCHHIERLKQGKQ
NT seq
2163 nt
NT seq
+upstream
nt +downstream
nt
atggtcagcatgggccggacggtactgaaagatcacaaagacagtaagaaggataaagcg
ggcaggagcatgtctctcacaggtcctggaccggtcaaagtgactgagtccttctcatgg
gaggagtatttaaaagagacgtcatccgttcccgcccctcccagctgcttcagacagtct
cagtttcctccctccaacgacttcaaggccggcatgaagctggaggctcgggaccctcga
aactccacctccacctgcatcgccacggtgatgggcttaatgggcgtgaggctccgccta
cgactggacggcagcgacaacaccaatgacttctggcgattggtcgactccgccgacatc
cagccaatcggaacctgcgagaagaacggagacatgctgcagccgccgctgggattcagg
atgaacgcctcgtcgtggcccatgtttctcctgaggacccttaatggagctgaaatggca
cctgccacggcatttaaaaaggagcccctgcggccgccccacaacggcttcaagcccggg
atgaaactggaggccgtggacaagaagaacccgtacctgatctgcccggccaccatcggc
gaggtgaaaggggaggagatcttcgtgatgtttgacggatggaggggggcgttcgattac
tggtgccgctacgactccagggacatcttccccgtgggctggtgcgccgccaccaaacac
ggtctacagccgcccggcaacagcatcaccgctccaaaaccgggtcctaccccttcctcg
tcctcaaaccccaaaccgccccggcgctccatgccttctccttaccgcctgccgactcct
cttcctcaactccccgtgcggaagggcatcagaggacggcggccgaaaagcgagaccatt
gcgctgctgaaagccctggccgcttccactgcggcccaggacacagaagatccaggaggt
gccacgccccaaaccacgcccatctcccagcttcccctgcgcccgtataagaagagggga
cctaaaccaggcagcaagaggaagtccagactccttcacagatctatgtctatagcagcc
agctcagactccagggtgcccatgactcagatgcccagcgatggactctcttctctggga
tccccgtcatctgtggtgtctactgtgtgtgtgtacgtgaacaaacacgggaactgcggc
ccacagctggaccggaagcgggttcagagactgccggaccacttcgggccggaggcggcg
aatctggttctgcagcagacggttcaggcctgtctggattgcgcgtaccaacccaaagtg
ctgctgggatgcctgcagagccaaggcggtggaggagaggtggtcagagtccgaacagat
ggcgggacgcggttggtgaagctgccgtcagcgtccagcgctgggtgtgtgttgcgcttt
ctggaactggtgtgtcgacacctgctgtgtgataatctgttcagcagtcaaccgttcagt
ccacacagcacctatgaccgcggtaaatcagttaaagaggaaatgatgtcagacgggccg
tctctgaaccgggctgtgaagcggatctccagagactctccgccgtactgcgctcctctc
tcccctaaactcctgcacacggacacacacccgtcagaagccgagactcttcctccagag
gagaacgggttactgaaggagcagcgcttcatggactccgcctccaactccatgacgccc
cgcccacagaccttgagaagcacctcggagtatcagtcaccccccagcagcccgtattac
catggcaacggcccgcctctacggcgacaggcctccaacccccccacacagacacaccgg
cgcgtggaggcagccagctctaccacgggtcccgaggcggcggcggcggcggagcgcggc
gttcccagaacccccgggaggagtccgtcttcctggtccatagaggaagtgatgcagttt
gtgcgggacgcggaccccgcagccctggccccgcacgcagagctcttcagaaaacacgag
atcgacggtaaagctctgatgttactgaggagcgacatggtgatgaagtacatggggctg
aagctcggaccggcgctcaagctctgccatcacatcgagagactcaagcaggggaagcag
tga
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