Megalobrama amblycephala (Wuchang bream): 125260369
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Entry
125260369 CDS
T08212
Symbol
col9a3
Name
(RefSeq) LOW QUALITY PROTEIN: collagen alpha-3(IX) chain
KO
K08131
collagen type IX alpha
Organism
mamb
Megalobrama amblycephala (Wuchang bream)
Pathway
mamb04510
Focal adhesion
mamb04512
ECM-receptor interaction
mamb04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
mamb00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
125260369 (col9a3)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
125260369 (col9a3)
09142 Cell motility
04820 Cytoskeleton in muscle cells
125260369 (col9a3)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
mamb00535
]
125260369 (col9a3)
Proteoglycans [BR:
mamb00535
]
Extracellular matrix (ECM) proteoglycans
Others
125260369 (col9a3)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
Motif
Other DBs
NCBI-GeneID:
125260369
NCBI-ProteinID:
XP_048034649
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Position
LG24:22605541..22630971
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AA seq
679 aa
AA seq
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MAVFSALHLLFLFQLLTSSLAQERPGPRGTPGAPGPPGPPGKDGIDGKPGPAGLPGKPGP
KGKAGAPGAAGIPGLPGLPGVDGLTGPDGPAGKDGPPGAAGDPGPPGPGGPPGRGRPGAL
GLAGENGLPGGXGPQGPPGPEGLPGLPGLPGLDGPPGLPGTLPEGNGDLLCPAICPPGPP
GPPGMPGFKGHTGHKGSKGELGKDGEKGDQGPPGPPGIPGTVGLQGSRGLRGLQGPVGAV
GDRGLPGFRGKPGIAGIIGKTGDVGEKGPQGFKGPKGEIGKIGPKGVPGGAGPKGEPGIP
GRDGKDGTQGLDGEKGDAGRPGVPGEKGPNGLPGLPGKAGAKGAKGVVGNPGEMGEAGPS
GEPGIPGEIGIPGERGETGPRGVAGGIGLPGKXGPQGVKGFQGVKGALGDPGLPGPTGIR
GGFGERGPVGAGGPKGDMGVAGSDGLPGENGEPGPYGPVGQKGEAGKRGELGAKGVVGPQ
GEIGGRGAPGKPGPMGFQGEQGFPGVAGKTGVPGKLASEQHIRELCGSMIDDQIAQLAAN
LRRPLAPGAVGRPGPAGPPGKQGEVGSIGHPGALGPPGYRGLPGDLGDPGPRGDVGEPGD
KGPIGKAIEGPIGDQGDQGLPGVNGIVKDGRDGAPGDPGEPGEAGRAGRPGHQGSPGICD
TSACQGAMPHGKSSNPKNH
NT seq
2040 nt
NT seq
+upstream
nt +downstream
nt
atggccgtgttctcagcgcttcatttactttttctgttccagctgttaacatcgtcactc
gcccaggagaggccgggtcctcgcggcacacctggagcgccagggccaccaggaccccca
gggaaagatggcatcgatggtaaacctggccctgctggacttcctggaaagcctgggccg
aaaggaaaagcgggagcccctggggccgcagggatcccgggactgcctggcctccctggt
gtggatggtttgaccggtccggacggtccagctggcaaagatggacccccaggagcagca
ggagacccaggacctcccggaccaggtggaccccctggcagaggcagaccaggagctctg
ggtcttgctggagagaatgggcttccaggtgggncaggacctcaggggccgccggggcct
gagggtcttccaggacttcctggtcttccaggcttagatggacctcctggacttccagga
actcttcctgaaggcaatggagatctgctgtgtccggccatctgtcctccgggtcctcct
ggaccacctggaatgcctggattcaagggtcatacaggtcataaaggaagcaagggagag
ttggggaaagatggtgagaagggtgatcagggcccgcctggtccgccaggaatcccaggg
accgtgggtttacagggctctcgagggctgagggggctgcagggtccagtcggagcagta
ggagacagaggattgcctggtttcagaggaaagcctggaattgctggcatcattggaaaa
accggtgatgttggtgaaaaaggacctcaaggtttcaaagggcccaaaggagagatagga
aaaataggccccaagggagtacctggaggtgcaggacctaaaggcgaacctggcatccct
ggcagggatgggaaggatgggactcaaggactagatggtgaaaagggggatgctggtaga
cctggagtacctggtgagaaaggacctaatggtctgcctggtttgccaggaaaagctggt
gcaaaaggtgccaaaggagtagtgggcaatccaggagagatgggagaagcaggaccatct
ggagagccaggtatacctggtgagattggcatccctggagagagaggagagactggaccc
agaggagtggctggtggcattggactacctggaaaanctggaccccaaggtgttaaagga
ttccagggtgtgaaaggagctctaggtgatccaggtctgcctggcccaacaggaatcaga
ggcgggtttggtgagaggggtccagttggagctggagggcctaaaggagatatgggagtt
gctggaagtgatggtttaccaggggagaacggagagcccggtccatatggtcctgtcggc
cagaaaggagaggctggtaagcgtggtgaactgggagccaaaggagttgtcggaccacag
ggagagattggaggcagaggggcacctggaaaaccaggaccaatgggattccagggagaa
caaggttttccaggggttgctggaaagaccggtgttcctggtaaactggctagtgagcaa
cacatcagggaactgtgtggctcaatgattgatgatcagatagctcagctagctgctaac
ctgagaagacccctggctcctggtgccgtgggacgtccaggaccagctggacctccagga
aagcaaggagaagttggatccattggtcaccctggagcccttggcccgccaggctataga
ggactgccaggagatctgggtgatcctggtcctcgaggggatgttggtgaaccaggtgat
aagggccccataggtaaagcgatcgaagggcccattggagatcagggtgaccagggtctg
ccaggcgtgaatggcatcgtcaaagatggccgtgatggagcacctggagatccaggagaa
ccaggagaagccggaagagccggcagaccaggacaccagggatcacctggaatctgtgac
acttcagcgtgccaaggagctatgcctcatgggaagtcctccaaccccaagaaccattaa
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