Megalobrama amblycephala (Wuchang bream): 125260419
Help
Entry
125260419 CDS
T08212
Name
(RefSeq) thrombospondin type-1 domain-containing protein 1
KO
K24433
thrombospondin type-1 domain-containing protein 1
Organism
mamb
Megalobrama amblycephala (Wuchang bream)
Brite
KEGG Orthology (KO) [BR:
mamb00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
mamb04990
]
125260419
Domain-containing proteins not elsewhere classified [BR:
mamb04990
]
Thrombospondin domain-containing proteins
Other thrombospondin domain-containing proteins
125260419
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
THSD1_D3
THSD1_N
THSD1_D2
TSP_1
TSP1_spondin
TSP1_ADAMTS
TSP1_CCN
Motif
Other DBs
NCBI-GeneID:
125260419
NCBI-ProteinID:
XP_048034734
LinkDB
All DBs
Position
LG2:45736038..45742031
Genome browser
AA seq
868 aa
AA seq
DB search
MSQGFLTATPFVLLFLVEIAMAGIHLWPSMHIALSNASVFVDYNTESNFTDDRLTVSLID
TDKNETVLSRSLFNQSEGSLEFNCSCFLYAGNFRFRLEQKHNIGLSNKSAIWWWSPILHV
HWPTFHLAVDRGSNNQSSNDIRIGVYTNDHFHSCSSSKASLYLDVSYLEQVQIGRNTFEK
VQNRIRHDIKVVRAQHVEMPCASPLTERGFVKISLKSPVTQQDIKSSGPLYLSSIFAYKL
HVDNIYKSGCEGAVSVRRIAPPCTVTNGKVLLYKEEINNMAPTSHMAFNFLTQGENETEF
NCSIFDPGKNKYCFHFTLVYSQAPSLAHTCVIVQRHTKMWGPWQPWSGCSVTCGEGVRER
VRECLLPSSGGMQCTGMVREQSHCSLEDCTEQLPPPSQTPPPAASTPLAGNLVVVAGISL
CLAVILATIFITVWRKLCRAPKCSSMRRGSLHSPNGRKNSDEASICGHSMQRPSFSESLQ
AAPLQKGFTLPAKQGPSDRGVLACQQSMSLPLPLSQDPERMSPSGQKILPPIFGYRLAQQ
QLKEMKKKGLKEATKVYHVSQSPVDDTMLEATASTPAGLTPAPQELDSPEESSSSHFRIR
SPFPEPAWSPKNNALSDRQKVDLLLSPPKSATSANIRRLERTADWVEMVERSRVPYSKNP
NFRRTSSFHENNQQFPLSRPYRERSMTQVTPRQIPEGSCRSRTWEHTLPELEVWSCSSPR
MTDSSVDHRRRPWVDTPPSQSNSKDSVPKTPTKEPLVDRHHVDQSPSSALDRAERAEQNW
SRRGPSPIQRNILARKLREANSSTCQRQRSSTFSTSDQRRGRCRSLPLSADYGNSPYSLT
ESEQHMMDISGYLGEDDGVEVLTIHKLT
NT seq
2607 nt
NT seq
+upstream
nt +downstream
nt
atgtcacagggtttccttacagcaaccccatttgtgctgctcttcctggtggaaattgcg
atggctggtatccatctctggccatccatgcacattgccttgagcaatgccagtgtgttt
gtggattacaacaccgaaagcaacttcaccgacgacagactgacagtgtcattgattgac
actgacaagaatgaaacagtgctctccaggtcgctctttaaccaatcagaagggtcactg
gagtttaactgctcctgcttcttgtatgcaggtaatttcagattcagacttgagcagaag
cacaacattggcttgtctaacaaaagtgccatctggtggtggagtcccattctgcatgtg
cactggcccacctttcacctggctgtggatcgtggcagcaacaaccagagctctaatgac
attaggattggtgtgtacactaatgaccacttccattcttgttctagcagcaaagcttct
ctctatcttgacgtcagctaccttgaacaagtccagattgggaggaacacatttgagaag
gtgcagaaccggataagacacgatatcaaagtagttagggcacaacatgtggagatgcca
tgtgcctcccctctgacagagcgtggcttcgtcaagatctccctaaaatcccctgtcacc
cagcaagacattaaatcctctggtcctctttacctgtccagcatctttgcatacaagctt
catgtggataacatttacaagagtgggtgtgagggagcagtgtctgtccgtcgaatcgca
cctccctgtacagttacaaatggaaaagttctgctttataaggaagagattaacaacatg
gcccctacttctcacatggccttcaacttcctcacgcaaggggagaatgagactgagttt
aattgctccatctttgaccccggcaaaaacaagtactgcttccatttcactctcgtctac
agtcaggctcccagtttagcacacacatgtgtgattgtgcaaagacatacaaaaatgtgg
ggaccgtggcagccatggagtggttgtagtgtgacgtgtggggaaggggtgcgagagcgt
gtccgtgaatgtctgctgccctctagtggtgggatgcaatgcactggcatggttagggag
cagtctcactgttcgctagaagactgcactgaacagcttccccctccatcccagacacca
ccaccagctgcaagcacgcccctagctgggaatctagtggtggtggctgggatttccctg
tgcctggctgtgattctggccaccatctttatcacagtgtggagaaaactctgccgtgct
ccaaagtgcagctccatgcgccgtggctctctgcactctcccaatggccgaaagaactcc
gatgaagcttctatctgtggtcacagcatgcagagacccagtttctctgaaagtctccag
gcagctccccttcagaagggatttaccttgcctgcaaagcagggaccttcggaccgaggt
gtgttggcttgtcaacagagcatgtcccttcctcttcccctttctcaagacccagagaga
atgtctccttctggccaaaagatccttccccctatttttggctatcgcttagctcaacag
cagctcaaggagatgaagaagaagggcttaaaagaggccactaaagtctaccatgtgtcc
cagagtccagtcgatgacaccatgctagaggcaacagcttcaacccctgccggtctaact
ccagcgccccaagaacttgacagcccggaagaatcaagcagcagccacttccgcataagg
tctccctttccagaacctgcgtggtctcccaaaaacaatgctttatcagatagacaaaag
gtggatttgttgctgagtccgccgaagtctgcaaccagtgccaacatccgtcgtcttgag
cgcacagcagactgggtagagatggtagagcgcagtagagtgccctactccaagaatccc
aatttcaggagaacctcaagtttccacgagaacaaccagcagtttcccctgtcccgaccc
taccgagagagaagcatgacccaggtgactcctcgccaaataccagaggggagctgtaga
agcagaacctgggagcatacgcttcctgaacttgaggtctggtcttgttccagtcctaga
atgactgatagctcagtggaccacaggagaagaccatgggttgacactcctccatctcaa
tcaaactcaaaagattcagttccaaagacaccaacaaaagagcctttggtggatcgtcat
catgtggatcagagcccatcttctgccctggaccgagctgaacgggcagaacagaactgg
agcagaagaggcccctcgcccatccagagaaacatactagccaggaagttacgagaggct
aattcatctacctgccaaaggcaacgcagttccactttctctacctcagaccagcgcagg
ggacgctgtcgcagccttcctctctctgcagactatggcaactccccatatagtctcaca
gaatcagagcagcatatgatggacatttctggatacttgggtgaggatgatggagtagaa
gttctgactattcataaacttacctga
DBGET
integrated database retrieval system
