Megalobrama amblycephala (Wuchang bream): 125260448
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Entry
125260448 CDS
T08212
Symbol
vps36
Name
(RefSeq) vacuolar protein-sorting-associated protein 36
KO
K12190
ESCRT-II complex subunit VPS36
Organism
mamb
Megalobrama amblycephala (Wuchang bream)
Pathway
mamb04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
mamb00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
125260448 (vps36)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mamb04131
]
125260448 (vps36)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
mamb04147
]
125260448 (vps36)
Membrane trafficking [BR:
mamb04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT-II complex
125260448 (vps36)
Exosome [BR:
mamb04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
125260448 (vps36)
Exosomal proteins of colorectal cancer cells
125260448 (vps36)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EAP30
Vps36_ESCRT-II
Xre-like-HTH
MA3
BBL5
Laminin_II
Flu_M1_C
Motif
Other DBs
NCBI-GeneID:
125260448
NCBI-ProteinID:
XP_048034789
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All DBs
Position
LG2:45726460..45735894
Genome browser
AA seq
382 aa
AA seq
DB search
MDRFVWTNGLLEMNETLVIQQRGVRLYDGEDKAKLDVGVVLLSTHRLVWRDQKNHECCIC
IPLSQVIFFEEQAAGIGKSAKIVIHLHPCPENKEPGPYQKSKYSYIKLSFKEHGQIEFYR
RLTEEMTQKRWENTPVSQPIPTGTGPKAGRTRAVGIVGIERKLEEKRKETDKNISEAFED
LSKLMEKAKEMVELSRSIANKIKDKQGDITEDETIRFKSYLLSMGIANPVTRETHGSGTQ
YHIQLAKQLGDMLQAPLEERGGMMALTEVYCLVNRARGMELLSPEDLVNACKMFESLKLP
LRLRVFDSGVMVVQLQSHSEEEMIASALDNVSDKGSLTAEEFAKLLGLTVLLAKERLLLA
EKMGHLCRDDSVEGLRFYPNLF
NT seq
1149 nt
NT seq
+upstream
nt +downstream
nt
atggacagatttgtgtggacaaatgggctccttgagatgaacgaaacgttagtaatccaa
caaagaggagtgagactttacgatggggaagacaaggctaagcttgatgtgggagtcgtt
cttctcagtacccatcgcttagtctggagagaccagaagaatcatgaatgctgtatatgc
atacccttgtcacaggtcatattctttgaggagcaagcagcaggcatcggaaagagtgcc
aagattgtcattcacctgcatccatgccctgaaaataaggagcctggcccctaccagaag
agcaagtactcttatataaagctgtccttcaaggaacatgggcagattgagttttacaga
cgtctaacagaagagatgactcagaagcgatgggagaatacacccgtctcacagccgatc
cccacaggaacaggacccaaggcaggaaggacacgcgcagtgggcattgtgggtattgaa
cggaagttggaggagaaaagaaaagagacagataaaaacatttctgaggcctttgaagat
ctcagtaaactaatggaaaaggccaaagagatggtggagctgtccagatccattgctaac
aaaatcaaagacaaacagggtgacatcacagaagatgagaccatccgtttcaagtcttat
ttgctgagtatgggtatagccaacccagtgaccagagagacacacggctcaggcacacag
taccacatccaactcgccaaacagctgggagacatgctgcaagcaccactggaggagcgt
ggaggaatgatggccctcactgaagtgtactgtctggtgaacagagcccgtgggatggag
cttctgtctccggaggacttggtcaatgcctgcaagatgtttgagtcactgaagcttcct
ctacggttgcgagtatttgacagcggggtgatggtggttcaactccagtcccacagtgaa
gaggaaatgattgcctcagctctagataacgtgtctgataaaggctccctcacagctgaa
gagtttgccaagctgttgggactgacagttctccttgctaaagaaaggttgttattagct
gaaaaaatgggtcacttgtgccgagacgattcagtagaaggtctgcgattttatcccaac
ctgttctga
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