Megalobrama amblycephala (Wuchang bream): 125260546
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Entry
125260546 CDS
T08212
Symbol
calcoco1a
Name
(RefSeq) calcium-binding and coiled-coil domain-containing protein 1 isoform X1
KO
K25828
calcium-binding and coiled-coil domain-containing protein 1
Organism
mamb
Megalobrama amblycephala (Wuchang bream)
Brite
KEGG Orthology (KO) [BR:
mamb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mamb03021
]
125260546 (calcoco1a)
04131 Membrane trafficking [BR:
mamb04131
]
125260546 (calcoco1a)
Transcription machinery [BR:
mamb03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
Others
125260546 (calcoco1a)
Membrane trafficking [BR:
mamb04131
]
Autophagy
ER-phagy
ER-phagy recepters
125260546 (calcoco1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CALCOCO1
SKICH
SOGA1-2-like_CC
Motif
Other DBs
NCBI-GeneID:
125260546
NCBI-ProteinID:
XP_048034913
LinkDB
All DBs
Position
LG24:complement(8342167..8361124)
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AA seq
654 aa
AA seq
DB search
MEKTLGVEFRNVGNCYFPQSRVDCHYTINSQHTWASNDWIGLFKVGWSSIKDYHTFVWAV
APSSYKEGTSVNCCVNFQASYLPGPSAQQYQFVYVDGRGEVCSRSTAFTFSAPKPMEELV
TLEEESQGEEVGENMLLVIPRAQLLQRRLQECLKERAELLQALEAADQNVEREKGRRERD
RSSWEQSRKELERKIGELKEEVREYIEKVEEMKKKQKEAEDLGKGLTEEKEALLAQKEAN
EQRIRELEEDIKVLTQRGLERETDLERMRERAKKAAAQKKEDEDEHKNLKLKMEQTEKEL
HSLSSEFQSLRSSLAQRDTHALQLRDTITTLTHKLNSAHRKEAANEVALSELRSVQERLN
VSERCVETLRGELRDMVAQRDTTHAELHQARLQAAQLTLQLADASLALREGRANWAKERE
TLQQNAEMDKVRLERLNDEIQQKEEMLQEARMEREKAVVELGREKDCNRVQLSETRRELQ
ELKASLRVAQKEKEQLQTEIQEVMEYSRQLERRLEVLSDSKWSETALLQSSHTESPLLSD
SEDENPEALQDAHSSGPLNHYSLCEQPQADLLLPATPPPSPRHPSSMDMVVISQPAPLSS
PHQPSAHTHTHSSESEEEFEAVLSGGHSPGEETALLLPDNRDATLGDLAESPLW
NT seq
1965 nt
NT seq
+upstream
nt +downstream
nt
atggagaagacattgggggtggagtttcgcaatgtcggaaattgctacttccctcagagc
agagtggactgccactataccatcaactcgcagcacacatgggccagtaatgactggatt
ggtctatttaaagttggctggtcatcaatcaaggactaccatacgtttgtgtgggcagta
gcaccatctagctacaaagaggggacctccgtgaactgctgcgttaatttccaagcttca
tacctaccagggcctagtgctcagcagtaccagtttgtgtatgtggatggaaggggagag
gtttgttctcgcagcactgcctttaccttctcagccccaaagcccatggaagagctggtg
actctggaggaggagagtcaaggagaggaagtgggcgagaacatgttgctggtcatcccc
agagcccagctactgcagagacgtctgcaggagtgtttgaaggagcgtgctgagctgctt
caggctctggaagcagctgaccagaatgtggagagggagaaaggcaggagagaaagagac
agaagctcctgggagcagagccgcaaggagctggaaaggaagattggcgagctgaaggag
gaagtgagagaatatatcgagaaagtagaggaaatgaaaaagaagcagaaggaagctgag
gatttaggtaagggcctgacagaggagaaggaagccctgctagctcaaaaagaagctaat
gagcagcgaatcagagagctagaggaggacattaaagtactgacccagagaggcctggag
agagagactgacctagaaaggatgagagaacgggctaagaaagcagcagctcaaaagaag
gaagatgaggatgaacacaagaacctgaagttaaagatggaacagacagaaaaagagctg
cacagtctttcatcagagtttcagagtctgagaagctcactggcccagagagatacacat
gctctacagctccgagacaccatcacaaccctcacacacaaactcaacagcgctcacagg
aaggaggcagccaatgaagtagcattgagtgaactccggagtgttcaagagcgtctgaac
gtgagtgaacgctgtgtggagactctgagaggggagctgagagacatggtcgctcagagg
gacaccacacacgccgagctccatcaggcgcgtctgcaggccgcacagctcacacttcag
ctggcagatgcaagcctggctctgagagagggcagagccaactgggcaaaggaaagagag
accctgcagcagaatgctgagatggacaaagtgcgtctggaacgcctaaatgatgagatc
cagcagaaggaggagatgttgcaagaggcgaggatggagagagaaaaagcagtagtggag
ctgggacgagagaaagactgcaatcgggttcagctaagcgagactcgccgtgagctgcag
gagctgaaggccagcctcagagtggctcagaaagagaaggagcaactgcagacagaaata
caggaagtgatggagtacagccgtcagctggagagaaggctggaggtgctgagcgattct
aaatggagtgagacggccctgctgcagagcagtcatacagaaagcccactgctatctgat
tctgaggacgagaaccctgaggccttgcaggatgcacactcttctgggcctctgaaccac
tacagtctgtgcgagcagccccaggctgacctgctgctcccggccaccccgccaccctct
cccagacatccctccagcatggacatggtggtcatcagccaacctgcacccctctcatct
ccacaccagcccagtgctcacacacacactcacagctctgagtcggaggaagagtttgag
gccgttttgtcaggaggccacagccctggagaggagacagctcttctcttgcctgacaac
agagacgctaccctcggagatctggcagagagtcccctgtggtga
DBGET
integrated database retrieval system
