Megalobrama amblycephala (Wuchang bream): 125260548
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Entry
125260548 CDS
T08212
Symbol
hnrnpa1b
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein A1b isoform X1
KO
K12741
heterogeneous nuclear ribonucleoprotein A1/A3
Organism
mamb
Megalobrama amblycephala (Wuchang bream)
Pathway
mamb03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
mamb00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
125260548 (hnrnpa1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mamb03019
]
125260548 (hnrnpa1b)
03041 Spliceosome [BR:
mamb03041
]
125260548 (hnrnpa1b)
Messenger RNA biogenesis [BR:
mamb03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
125260548 (hnrnpa1b)
mRNA cycle factors
Common to processing body (P body) and stress granule
125260548 (hnrnpa1b)
Spliceosome [BR:
mamb03041
]
Common components
Common spliceosomal components
hnRNP proteins
125260548 (hnrnpa1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_PARP14_3
Nup35_RRM_2
Motif
Other DBs
NCBI-GeneID:
125260548
NCBI-ProteinID:
XP_048034917
LinkDB
All DBs
Position
LG24:8603340..8608059
Genome browser
AA seq
393 aa
AA seq
DB search
MSKEGQPREPEQLRKLFIGGLSFETTDDSLRAHFEQWGTLTDCVVMKDPNTKRSRGFGFV
TYSSVTEVDAAMDARPHKVDGRLVEPKRAVSREDSNKPFAHTTVKKIFVGGIKDDTEENH
LRDYFDVFGKIEAIEIMVDHKTGNKRGFAFVTFDDHDSVDRIVIQKYHTVNGHNCEVRKA
LSKQEMQNTGMNMRGRGGGGGGGGGNFNRYGNNGGYNNDFGGGGGGGGNRDGYFGRGGRG
GNGGGGGGGYGGGDCYNNGFGGDGGYGGGGGGGPGNYGGNRGYGGGGGGGHGYGNQGGGY
GGGGNSGGGYNDNYNNGNGNFGGGNFGGGGGGGGGSGNYSDFGNYNNQQSNYGPMKGNFG
SGGGGGRNSGPYGGGYGGGSSGGYGGGSSGRRF
NT seq
1182 nt
NT seq
+upstream
nt +downstream
nt
atgtccaaggagggccagccacgtgagccagagcagctgcggaagctcttcattggaggg
ctcagctttgaaaccactgatgatagtttgcgggcacattttgaacaatggggaacctta
acggattgtgtggtcatgaaagatccaaacaccaaacgctccaggggctttgggtttgtc
acatattccagcgtgactgaagtcgacgccgctatggatgcacgcccccacaaggtcgac
ggtagacttgtggagcccaaacgagccgtgtctcgagaggattccaacaagccatttgct
cacacaaccgtgaagaagatttttgtgggtggcattaaggatgacactgaggagaaccat
cttcgcgactacttcgacgtgtttggaaagattgaggccattgagataatggttgaccac
aagactggaaacaaaaggggctttgcctttgttacgtttgacgatcatgattctgttgat
cgtattgtcattcaaaaataccacactgtgaatgggcacaactgtgaagtcaggaaagct
ctatctaaacaagaaatgcagaacactggcatgaacatgagaggccgtggtggtggtggt
ggtggaggaggtggaaacttcaacagatatggcaataacggtggctacaacaatgacttt
ggaggtggtggtggcggcggtggcaaccgcgacggatactttggaagaggcggtagagga
ggtaatggtggtggtggaggtggtggttatggaggaggtgactgctacaacaatggattt
ggtggagatggtggttatggtggaggtggtggcggcggtcctggtaactatggtggaaat
cgcggctatggcggcggtggtggaggaggacatggttatggcaaccaaggtggaggttat
ggtggtggtggaaacagcggtggtggctataatgacaattacaacaatggcaatggaaac
tttggaggtggcaactttggaggtggcggcggcggcggtggtggaagtggtaactacagt
gactttggcaactataacaaccagcagtccaactatggtcccatgaaaggaaactttgga
agtggtggcggaggaggaaggaacagtggcccatatggtggtggctatggaggtggatca
agtggtggatatggtggtggctctagtggtagacggttttaa
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