Megalobrama amblycephala (Wuchang bream): 125260651
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Entry
125260651 CDS
T08212
Name
(RefSeq) protocadherin-16-like
KO
K16507
protocadherin-16/23
Organism
mamb
Megalobrama amblycephala (Wuchang bream)
Brite
KEGG Orthology (KO) [BR:
mamb00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
mamb04515
]
125260651
Cell adhesion molecules [BR:
mamb04515
]
Cadherins
Cadherin related
125260651
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_CELSR2_9th
Fibulin_C
Cadherin_4
Big_9
CADH_Y-type_LIR
FeoB_associated
TMEM154
TCL1_MTCP1
RIFIN
Motif
Other DBs
NCBI-GeneID:
125260651
NCBI-ProteinID:
XP_048035088
LinkDB
All DBs
Position
LG2:complement(46156982..46262814)
Genome browser
AA seq
3301 aa
AA seq
DB search
MTLFNGFGKNTCGQFRMWVFWRLRMLLVLCVVVELLTVMVGGEDTQGILELQLDEEQPAG
TIVGDISAGLKPGVTASLYFISDHEGTGIGNDLHIDENTGIIKTARRLDREERDHYSFIA
VTMTGFTVEVFITVNDINDHAPSFPKKKASLKIPEQTAVGTKFSLEPATDADKDQLTVQG
YQIKEGNVGQVFRLETKRAANKVLYLDLVVNGVLDREKRSSYSLVLEAFDGGSPRKTGQM
SLAVLVQDINDHAPIFNQSRYNAIISESLPQGSNILQVFASDADEGDNGLVLYEINRRQS
DPDRYFVIDPRSGIITLNKPLDYEVRKVHELVVQARDNASHPEITNAFVTIHVRDFNDNQ
PTMTIIFLSEDGSPQISEGAQPGQYVARISVSDPDYGEYSNVNVSLEGGDGKFALTTKDS
IIYLIYVDQILDREERDSYELRVMATDSGTPPLRAESSFTIHVTDVNDNPPLFEQQAYKQ
TIPEVVYPGSFVLQVTARDKDQGPNGDVRYSILPDKKTHASWFTIDPVTGIITTATKLDY
ETDPKPSIKVVATDGGRPPLSSTALVEIALQDSNDNEPVFGSSFYNVSIKENTSAGTCFL
EVKADDADGGSFGAITYSIGSGPASAPPSQFTINKESGQICTSVALDRDEGSDSFDFTVT
ATDGGGLASSAYVKVSLVDINDNRPTFYPVNYAVSLSTQSTPGTSVVRVTAQDPDAGANG
KVTYHTVPGGGSNFFTLNKDTGVISLSRSLHGKANSVITMVITARDGGGLTAPVNARVNI
SVVAGSVAPPVFEQAQYFFTVSEDVLRGTEVGVVRASSRNGVSKDVTYTISAGDPDGYFM
VDPETGALRTSLPLDHESRPFFDLEIQARSGSPPAFGETRVRVTIADVNDNGPIFFPSSS
ESLLLPEATKMGTVVYRVQAEDRDSGPNGQLSFDLMSAGGQRTFGVERSSGEIRLIGSLS
YDSVPRYDLQVIAKDSGAPQLSATFSLVVHIQAENDQGPVFDTMTYRVELKENTPLKTNF
LQVRALSRDPNGNGGSSRGSTPSSTLAYRLRPDGDAAGFGIAPDSGWLFVKSALDREAKD
IYLLTVLATSGSGQMGKTGSATVRVSVTDENDNSPRFSQERVFLAVRENLPAGTGFGRVS
ATDRDAGLNSRLTYRLLHTDRYFQINSQTGEVSTRAALDREHQSSYQLIVVVQDSGTPPR
SATGTAHITVLDENDNAPTFSHTQPGREILIQVQEGLPAGSLLGTLHAKDPDEGENGTIF
YSLSGSRAERFSLNPNTGELRSSSPLRRTEKAEYSFTVTASDRGAPSQSTSTALLVQVIG
STRTPPKPNTLSMTLNSVEGAKPGSVIGSVRAHDQHEVTSNGQITYLVVGGTDHEGTFMV
DRLTGDVYLARELDYEKGSRYTLQIEVDDFSEAYPSTHMVQLEINVQDSNDHAPQFPEDP
VTIVIPENIQAGSSIYTFQATDKDGSGPNSEVRYSIQQRWPDNPDLFSLDPVTGVLKLGR
ELDHEETSSLFLVVHATDSASDPDQRLWGSVTARVFVTDENDNAPVFSSPTAVSVMEDQP
VGFVLLYVMARDADQGENGRVSYRVQSGNTAGRFSLSPNSGSLSILKPLDREEQENYNLT
IVAEDHGIPQHSTTQVLSIQVIDVNDEAPWFELSEFEAQIKENQPAETSILKVSASDRDH
GTNGLVTYGGVTEDGFAINPETGVIFVTQVLDRELQDHYTVTVYAKDGGIPPNFAKAKVH
ITVLDENDNAPAFGRQHYSLEVPENQEPVELFTIKATDLDTGESGRLEYKITAGDADGDF
RLDGSSGALSTSRPLDRERKSSYSLQVVVQDHGSPSLSSTTTVEISVLDVNDNSPKFGSS
SYNVDVSEDAAVGLVVLDATATDVDEGENGQILYFLSQEAKGAFIVHPDTGRITTAALLD
REKRASYTFQVYAVDLSPASPRNTTAQVTVTILDVNDNAPFFIQDPLIINVSSGSVSTHQ
VVATMRAEDKDFGANGSVFYRFAMPVRGFAINSLTGEIQTTEKLQTLTQTQRTLIVEAMD
QGSPPQSSLGVVIVYVKEENYKGIRFSRTARDVSLQENAATGTAVAQAQAQHPDGTRDGI
TYSIFSGNKYHSFSISSSTGEIWVQSSNGLDFEDTPRLRLVVKAETTSSNSFMAVNLILQ
DVNDNLPRFQLQNYVAFMHEAQGYDFPIIQVMAEDVDQGQNGQVTYSIESSSQSGLFKID
PLTGSITTAAIMDREIWTQAQLVIKATDRGSPKLVGTATITVIIVDLNDNSPTIPVPREI
RVPENSLIGTEITLVTGNDVDSGPVLSYSLQLDASSQGKFDIHRYNGRVSLTAPLDFEER
TWYTLTIRASDSKHQSEANLTVLVEDINDNAPTFTQDLYQVTLPEHSPPGSPVITVTATD
RDSGENGKVTYRVLSSTRDGFYIDPKNGTLFIRQKAEFDPEQPSVSVVIEARDGGSPTLS
SSATVQVQLMDVNDNAPIFHQLEYKATVSEDQLPGATILTLEAVDGDLSQENSGFDFAIA
SGNVGNAFQIESSVRFIEGHGFQTVGTLILAERLDFEALSRYNLTIAVSDRGVPQRSSSV
PAIITVTDVNDNPPVFGRAEYIVALSEGAAAGTEILRVTATDPDSAPYAEVQYSISSGDE
MKLFSVDQWTGALKLQRPLDRESQTSHVVIVQASDGHGHFALAPVSVEVKDINDNRPYFP
ITTLTASVRENQPPNSAVTVLHAIDYDTGVYGQLKYYLMDHSSLGKDLFLVDQNSGEVRT
RQIFDFEKVNSFNFIALAVDAGNNSATVTVQVYVTGEDEYDPVFTSSDLSFEVPEGAKKG
QSIGQVQAKDEDGGVDGIVLYSFPNSSPYFEVNKTTGVIYLKMDSSGSSSGGSRSKRETR
LMTMDVTAHSPLDTSRVASAQLTIDVTNTSFGLTTDFNILLVSIIAASLGVIVLLVIIAV
ALYLVRSKRKKKGQDTGNSTVSSGTALQKLDESKPAGSDRIYHQALPGYAGDEEGTGGGS
YTRGGSLDPSHSSGRGSAEAAEDDEIRMINEYPRVASITSSMQEHISARGPDSGIQQDAD
QLSDISCEPGPLDASQWFKSKKLGSISGSLSGTLLSGQLPVYRDEGGGYLGVGRGLNISH
PKDYAFPEDGKPSVDGSLTAIVASDEELRGSYNWDYLLNWCPQFQPLASVFTEIARLKDE
SLPPNNPRRPFQPKVKTDPKPRIDPPPLITSVAHPGAKSVPPKPAIARTFHHLASLRRSP
ISHEGSISSAAMSPSFSPSLSPLAARSPAVSPFGVTQGPSASIISTTEHSLEHSDEAEMR
I
NT seq
9906 nt
NT seq
+upstream
nt +downstream
nt
atgactctgtttaatggctttgggaaaaacacatgtggacagttccggatgtgggtattc
tggaggctaaggatgcttttggtgctttgcgtagtagtggaactgttaacagtaatggtt
ggcggagaggatacacaaggtatcttagagcttcaattagatgaggagcaacctgcaggg
acgatagtgggtgacattagcgctggtttgaaacctggagttacagcctctctttacttc
atctctgatcacgaaggcaccggcattggtaatgatctccacatcgatgaaaacacaggc
atcatcaagactgccaggcgacttgaccgagaggaaagagaccattacagttttatagct
gtcactatgacagggttcacagtcgaggtcttcatcactgtaaatgatatcaatgaccat
gccccctcattccccaagaagaaagcctctttgaagatcccagagcaaacagcagtggga
actaagttctctcttgagccagccaccgatgcggataaggatcagcttaccgtacaagga
tatcagatcaaagaaggcaatgtaggacaagtgttccgactcgagaccaaaagagctgca
aacaaagtcctttaccttgacttggtggtcaatggagtcttggaccgagagaagaggtcc
tcctactccttggtgttggaggcctttgacggtggatctccaaggaagactggacagatg
agtcttgccgtcttggtgcaggatatcaatgatcacgctccgattttcaaccagagtcgt
tacaatgccatcatctctgagagccttcctcagggcagcaacatcctgcaagtttttgca
tctgatgctgacgaaggagacaacggccttgtattgtatgagataaaccgaaggcagagc
gacccggatcgctactttgtcattgaccctcgctctgggatcattacactcaataagcct
ttagactacgaggtgaggaaggttcatgagctggtagtgcaagccagagataatgcgagc
catccagagatcaccaatgcctttgttacaatccacgttcgagacttcaatgataaccag
ccaaccatgaccataatttttctcagtgaggacggctcaccccaaatctctgaaggtgct
cagccaggccaatacgttgcaagaatctctgtctcggaccctgattacggcgagtactcc
aatgtcaatgtgtctcttgagggaggtgatgggaaatttgccctgaccactaaagacagc
attatctacctcatctacgtggaccagattctggatcgagaagagagggattcttatgag
cttcgtgtcatggctactgattctggaaccccgccccttcgtgcagagtcctcgtttaca
attcacgtcaccgatgtaaatgacaacccacctctctttgaacaacaggcatataagcag
accataccagaagttgtctacccaggtagctttgtgctgcaagtgaccgcgagggacaaa
gaccaaggtcccaatggtgatgtccgctacagcatcctaccagacaagaaaacgcacgcc
agttggtttaccattgaccccgtcacaggtatcataaccactgcaaccaagctggattat
gagacagacccaaagccaagtatcaaagtagtggccactgatggaggacgacccccgtta
tcctccactgcactggtagaaatagccctccaggatagtaacgataatgagccagtgttt
ggaagcagcttctacaatgtttccatcaaggagaacacatcagcggggacctgcttcctt
gaggtaaaagcagatgatgcagatggtgggtcatttggggccatcacgtattctattgga
tccgggcctgctagtgctccacccagccagttcaccatcaataaggagtctggacagatc
tgcaccagtgtggctttggatcgagatgaaggatcagacagtttcgacttcactgtcact
gcaacggatgggggtggccttgcatcctctgcctatgtgaaggtgtcactggtggacatt
aatgacaacagacctacattctaccctgtgaactatgccgtcagcttgagcacacaaagc
acacccgggacctctgttgtcagggtaacggcccaagacccagatgctggtgcaaatggt
aaagtgacatatcacactgttcctggtggtggatccaatttctttaccctcaacaaggac
acaggtgtgatctctctgtcacgctcgctgcatggaaaggccaactctgtcatcaccatg
gtgatcacagcacgggacggaggtggtctcacggcacctgtcaatgccagagtgaacatc
agcgttgtggctggctcagtagcgcctccagtgttcgagcaagcgcagtacttcttcacc
gtatctgaggacgtgctccggggtaccgaggttggcgtagtgagagccagcagcaggaat
ggagtctctaaggatgtcacatacactatctctgctggggatccagatggatatttcatg
gtagatccggaaactggagcacttagaacaagccttcctctcgaccatgagtcacgtccc
tttttcgacttggaaattcaggcgcgaagcggatcccctccagcttttggagagacgcgc
gttcgggtcaccatagcagatgtgaatgataacggccccatatttttcccatcatcctct
gagtctctgctcctaccagaggccacgaaaatgggtactgttgtgtaccgcgtacaggct
gaggaccgcgactcaggccctaatggacagctgagctttgacctgatgtcggccggaggg
cagcgcacttttggcgtggagcgcagcagtggggagatccggctaattgggagtctgtcg
tacgacagcgtacctcgctatgacctccaagtgatcgcaaaagacagcggcgcgcctcag
cttagtgctacgttcagcctggtggtccacatccaggcggagaatgaccagggtcctgtg
tttgacacaatgacctaccgtgtggagctgaaggagaacacgccactcaaaaccaacttc
ttacaggtcagggcactcagtagagatcccaatggaaatggagggtcatccagaggttcc
acaccatcttccacactggcttaccgactccggcctgatggggacgcagcaggatttggg
attgccccagacagtggttggctgtttgttaagagcgctttggatcgagaggccaaggat
atctacctgctaactgtgctggccacgtctggaagcggccagatggggaagactggcagc
gcgacggtcagggtttctgtgacggatgaaaatgataactctcctcgtttctctcaggag
agggtgttcttggcagtgagggagaacttgcctgcgggaactggttttgggagggtgtct
gctaccgaccgtgatgctggtctcaacagccgtcttacatacagactacttcacacggac
cgatacttccaaatcaattcacagactggtgaagtcagtactagagcagctttggatcgt
gagcaccagtccagttatcagctcattgtagtggtccaggacagtggtacccctccacgt
agtgccaccggaacagcccatataacagtgctggatgagaatgacaacgcgccaacgttc
agccacacgcagcctggcagggagattctcattcaggttcaggagggtcttcctgccggt
tctttattaggaactcttcacgccaaagacccagatgagggagagaatggcactattttc
tactcattatcgggctccagagcagaacgtttctccttgaacccaaataccggagagctg
cgctcctcttcccccctgaggcgaactgaaaaggcagagtacagtttcactgtcactgcc
tcggaccgtggagctccatctcaaagcacttcaactgccttacttgtacaggtcattggc
tccacaaggacccctccaaagcccaacaccctatccatgaccctcaactcagtggaagga
gccaagccaggctctgttattggctcagttagagcacatgaccaacatgaagtgacctca
aatggtcagataacttaccttgtagtgggaggcacagatcatgaaggaacctttatggtt
gaccgtttaacaggagatgtttacttggctagagagctggactatgaaaaagggtcacgg
tatactctacagattgaggtggatgatttctccgaggcctatccaagcactcacatggtt
cagttggaaatcaacgtgcaggatagtaatgaccacgcaccacagtttccagaagatcca
gtcactattgttattcctgaaaacatacaagccggttcctccatttataccttccaagct
actgataaagatggtagtggccctaacagtgaggtacgttattctatccaacagcggtgg
cctgacaacccagatctcttcagtctagatcctgtcacaggagtcttgaaactgggtcga
gagctggaccatgaggagacctccagcctgttcctggtggttcatgccacggattcagcc
tcggaccccgatcagagactctggggctcggtgacggcacgagttttcgtcactgatgag
aacgacaatgctccagtcttcagctccccgactgctgttagtgtgatggaggatcagccg
gtgggctttgtgctgctgtacgtcatggcccgggatgcagatcagggcgaaaatggacga
gtatcctacagggtccagtcaggaaacacagcaggacgattcagcctcagcccgaacagt
ggctccctctctatccttaaacctctggatcgtgaggagcaggaaaactacaatctcaca
attgtcgctgaggatcatgggataccccaacattccaccactcaagttctatctatccag
gttattgacgtaaatgatgaagcaccgtggtttgaactcagcgagtttgaagcccaaatc
aaagagaaccagccagcagaaacaagcatactgaaggtctccgcttcagaccgggatcat
ggcactaatggcttagtgacttacggtggtgtgactgaggatggattcgcaattaatcca
gagacgggtgtgatattcgtcactcaggttctagatagggaacttcaggaccactacact
gtaacagtgtatgcaaaagatggtggcataccccctaactttgccaaggctaaagtccac
atcacagtgctggatgagaatgataatgctcctgctttcgggcggcagcattacagtctg
gaggtgcctgagaaccaagagcctgtggagctgttcaccatcaaagccacagacctggac
accggagagagtggacgactggaatataagatcactgctggcgacgcagatggtgatttt
cgacttgatggttcctctggagctctgtctacttcaagacctcttgaccgagagcggaag
agcagttattcattgcaagtggtggttcaagatcatggcagcccctctctgagcagcacc
accactgtggaaatctcagttcttgatgtaaacgacaacagccccaagtttggcagcagt
agctacaacgttgatgtctcagaagatgctgctgtaggtttggtggtattggatgcgaca
gccacagatgtggatgagggtgaaaatgggcagatcttatacttccttagccaagaagcc
aaaggtgcattcatagtgcatccagacacggggcggatcactaccgcagcacttctggac
agagagaaaagagcttcttacacattccaagtgtacgctgtcgacctatcacccgcttca
ccccgcaacaccacagcccaagtaaccgttaccatcctggacgtcaacgacaatgcaccg
ttcttcatccaggacccactgattatcaatgtgtccagtggtagtgtgtccacacatcag
gtggtggccaccatgagagcagaagataaggactttggagccaatgggtcggtgttctac
cgctttgctatgccagtccgaggatttgctattaactcactaacaggggagatccagacg
acagagaagctccaaaccctcacgcaaacccaacgcaccctcatagtggaggctatggac
cagggcagccctcctcagtcttcccttggggtggtgatcgtctatgtgaaggaggaaaat
tacaagggcattcgattctctcgcacagccagagatgttagcttacaggagaatgctgct
acaggcactgcggtcgcccaggctcaggctcagcaccctgacggcacccgtgacggcatc
acttacagcatcttcagtgggaataaataccattctttcagcatcagctccagtacaggt
gaaatctgggtacagagctcaaatggcctggattttgaagatactccaagactccgtcta
gtggtgaaggctgaaactacatcttcaaactccttcatggctgtcaacctgattcttcag
gatgtcaatgacaacctaccccgattccagctgcagaactatgtggcttttatgcatgaa
gcacagggctatgattttcctataattcaggttatggcagaggacgttgaccaggggcag
aatggtcaggtgacttactccattgagtcttcgagtcaaagtggccttttcaaaattgac
cctctgaccggcagcatcacgactgcggccattatggacagagaaatctggacgcaggca
cagttggtgataaaagccactgatcgtggtagccccaagctagtaggcactgcaaccatc
acagtgattattgtcgacctcaacgacaacagtccaaccatcccagtgccacgggaaatt
agagtgccagaaaactctcttatcggcactgagatcactctggttactggaaatgatgtg
gattctggcccagtgctttcttactctttgcagctggatgcttcatcacagggaaaattt
gatatccatcgttacaatggccgtgtgtctttgacagcaccactggactttgaagagcgg
acatggtacacattgactattcgagcttcagattcaaagcaccagagtgaagccaattta
actgtgctggtggaggacataaatgataatgcacctacatttactcaagatctatatcag
gtaacacttccagaacattctccaccaggcagtcctgttatcacagtaacagcaacagat
cgagattcaggagaaaatggaaaggtcacctatcgagtgttgtcttcaacgagggacggg
ttttacattgatccaaaaaatggtacacttttcatcagacagaaagcagaattcgacccg
gagcagccctctgtgagtgtagtcatcgaagctcgtgatggaggatctccaactctatca
tcttctgccacagtccaagttcaactgatggacgtcaatgataacgcccccatattccac
cagttggagtacaaagccacagtgtctgaggaccagctacctggagccactattctgacc
ttagaggcagtagatggagacctttctcaggaaaactctggttttgattttgcaatcgcc
agtgggaatgttggaaatgcattccagattgagagtagcgttcgttttatagagggccat
ggattccagaccgtaggaaccttgatcctggcggagcgactggattttgaggcgttatca
cgctataacctcaccattgcggtctcagaccgaggtgttccccaacgcagctccagcgta
ccagccatcatcacagtcactgatgtgaatgacaaccctcctgtctttggcagagctgag
tacatagtggctttgagtgaaggggcagctgctgggacagaaatcttacgtgtgactgca
actgatccagattcagctccctacgcagaggtccagtacagcatcagctctggagatgag
atgaaactcttctctgtggatcaatggactggggcactgaagcttcaaaggcctttagac
agagagagccaaacttcccatgtggttatagtacaagcctcagatggccatggtcatttt
gccttggctccagttagtgtagaggtaaaggacattaatgacaacagaccttactttccc
attactacgttaacggccagtgtccgtgagaaccaaccacccaactctgctgtaactgtg
ttacatgcaatcgattatgacacaggagtttatggacagcttaagtattatttgatggac
cactccagtctaggaaaagacctcttcttggtagatcagaactctggagaagttcgtacc
aggcagatatttgattttgagaaggtaaactcatttaacttcatcgctttggctgtagat
gcagggaacaactcggctacagtcacagtgcaggtctatgtcacaggagaggatgagtat
gacccagttttcacatcttcagacttgtcctttgaggtaccagagggagccaagaaaggt
cagagcattgggcaagtacaggccaaagatgaggatggtggggtggatgggattgtactc
tactctttccctaattcctctccttacttcgaagtgaataagaccactggtgtaatctac
ctaaagatggacagctctggcagctcaagtggtgggagtcgctcaaaaagggaaacccgc
ctaatgactatggatgttaccgcccacagcccccttgacacctcgagagtagcttctgct
cagctaaccattgatgtcaccaacacatcctttggcctcacaacagactttaacatcctc
cttgtgagcataattgctgcctctcttggagtaattgtcttgttagtcataattgctgtg
gctctttatctagtaagatcaaagcgaaagaagaaaggacaagacactgggaatagtact
gtttcttcaggcacagctttgcaaaaattggatgagtctaaacctgcagggagcgacagg
atctatcatcaggcgcttcctggatatgcaggtgatgaggaaggaacaggtggaggctcc
tatactcgaggaggatccttagatccttctcactccagtggacggggatctgccgaagcg
gcagaggatgacgaaatcaggatgatcaatgagtacccaagagttgcaagcatcacctcc
tcaatgcaagagcacatctctgccaggggccccgattcaggtatccaacaggatgcggac
caactctctgatatttcttgtgaaccagggccacttgatgcaagccagtggttcaaaagt
aagaaactggggagcatcagtgggagtctcagtggtaccctactgtctggtcagctccca
gtctatagagatgaaggtgggggttaccttggagtaggtcgtgggttgaatatttcccat
ccgaaagattatgctttccctgaggatggcaaaccctcagttgatggctccctcacagcc
atagtggcaagtgacgaggaattgcgaggcagctacaactgggactaccttctcaactgg
tgccctcagttccaacccttagctagtgtctttacagagattgccaggctaaaagatgag
agcttacctcccaacaacccacgtagacccttccaacccaaagtcaagacagaccccaag
ccaagaattgaccctccacccctcattacctcggtggctcatccaggggccaaatctgtc
ccacctaaacccgccatagcacggacgttccaccacttagcatccctaaggcgttcacct
ataagccacgagggctccatctcctcagcagcgatgtctcccagtttttccccttcactg
tccccacttgctgcacgatccccagccgtctccccattcggtgtcacccaaggtccctca
gcctccatcatcagcaccacagagcactctctggagcacagtgatgaggctgagatgaga
atttaa
DBGET
integrated database retrieval system
