Megalobrama amblycephala (Wuchang bream): 125260921
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Entry
125260921 CDS
T08212
Name
(RefSeq) pseudouridylate synthase 7 homolog isoform X1
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
mamb
Megalobrama amblycephala (Wuchang bream)
Brite
KEGG Orthology (KO) [BR:
mamb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mamb03016
]
125260921
Enzymes [BR:
mamb01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
125260921
Transfer RNA biogenesis [BR:
mamb03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
125260921
Prokaryotic type
125260921
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
PUS7L_N
Motif
Other DBs
NCBI-GeneID:
125260921
NCBI-ProteinID:
XP_048035384
LinkDB
All DBs
Position
Unknown
AA seq
685 aa
AA seq
DB search
MFRSSPENLLLLTSALCSFRSVLFSSHSVLKRIVYCPKRSIEGSRCAATHSTLISEPMEE
SGSTPVSVPLLTGEKRSFPDEDPDPAAKRVRVEEEESRRGEDEEEQPDEEEEPCEEEEES
FADMMKHGLSEADVGIHKFISEHEGFSGILKERYSDFVVHEISKDGKIVRLDDLSVPADV
EEISPELSPAECQSLTEEQKQQLAELQLFKNKEGNVAIEVQEDSKEKRTLLHKAVKTLYP
GLETKTEDREGKKFIVAYHAAGQKALAAPRKHSWPKNRGSFCHFVLYKENKDTMEAINLL
SKFLRVRPNMFSYMGTKDKRAITVQEIAVLKISAERLSHLNKCLMNLKLGNFSYKRHPLK
LGELQGNHFTVVLRNISGSLEQVEQAMTSLRETGFINYYGMQRFGTTAVPTHRVGRAILQ
NNWKEVMDLILKPRPGAEKGYLVKCREEWARSHDPEAALKKLPVKRCVEGQLLRGLAKYG
KNNIITAFGLIPRNNRLMYIHSYQSYVWNSMVSKRVEAFGLRAVEGDLILRGGSAHVLSA
DEAEKHSIHDVVMPLPGFDVIYPAHSVGRGYRDMLSADDLDIDNMRHKVRDYSLAGAYRK
VLTRPSDVSWELIQYDDPRVPLVHTDVEKLENAPAPVYLTEGKYRALKMEFSLPSSTYAT
MAVREVLKMDTSIKNQTQLNTTWLN
NT seq
2058 nt
NT seq
+upstream
nt +downstream
nt
atgttcagatccagtcctgagaatctgctgttgttgacctctgctctctgttctttcaga
tctgtgctgttttcttctcattctgtgttaaagcgcattgtttactgtccaaagagaagc
attgaaggatcccgctgtgctgccactcactccacactgatctctgagccgatggaggag
tctggatccacaccggtctctgttcctcttctgaccggagagaaacgatctttccctgat
gaggatccggatcccgctgccaagagggtcagagtcgaggaagaggagagcagaagagga
gaggatgaggaagagcagccggatgaggaagaagagccgtgtgaggaggaggaggagagt
tttgctgacatgatgaagcacggcctcagtgaggcagacgtgggcattcacaagttcatc
agcgaacacgagggcttctctggcatcctgaaggagaggtactcagactttgtggtccat
gagatcagtaaagacgggaagatcgttcgtttggatgatctgtccgttcccgcggatgtc
gaggaaatctctccggagctcagtccggccgagtgtcagagtctgacggaggagcagaag
cagcagctggccgagcttcagctcttcaagaacaaagaggggaacgtggccatcgaggtg
caggaggactcaaaggagaagcgcactctcctgcacaaagccgtgaagacgctgtatcct
ggcctggagaccaagactgaggacagggaagggaagaagttcatcgtggcgtatcatgct
gcggggcagaaagcgctggcagctcctcgaaagcattcgtggccgaagaaccgtgggagt
ttctgccatttcgtgctctataaggagaacaaggacaccatggaggccatcaaccttctc
tccaagttcctcagggtcaggcccaacatgttctcctacatgggcaccaaagacaagagg
gccatcacagtgcaggagatcgccgtcctgaagatcagcgctgaaagattgtctcacctc
aacaaatgcctcatgaacctgaagctgggaaactttagctacaagagacatccattaaaa
ctcggagagctgcagggaaaccacttcacggtggttctcaggaatatctctggctctctg
gagcaggtggagcaggccatgacttcactccgagaaaccggcttcattaactactacggc
atgcagcgcttcgggaccacagccgtacccacacaccgggtcggcagggcaatattgcag
aacaactggaaggaagtgatggatctcatcctgaagcctcgtcctggagcggagaagggt
tatctggtgaagtgcagagaggagtgggcgcgctctcacgacccagaggcggctctcaag
aaactgccggtcaaacgctgcgtcgagggccagttactgcgaggcctggccaaatacggc
aagaacaacatcatcacagcgttcggactgatccctcgtaacaacaggctgatgtacatc
cacagttaccagagctacgtgtggaactctatggtcagcaaacgcgtggaggccttcggg
ctgagagccgtggagggagatctgatcctcagaggaggctccgctcatgtcctgtcagct
gacgaggcagagaaacactccattcatgatgtggtgatgccgctgcccgggtttgacgtc
atctaccccgctcatagcgtgggtcgaggatacagagacatgctgagcgccgatgatctg
gacatcgataacatgaggcacaaagttcgggattattctctggccggcgcttacagaaaa
gtcctcacacggcccagcgacgtcagctgggagctgattcagtacgatgatccacgagtg
cctctcgttcacacagatgtggagaaattagaaaacgctccagctccagtttacctcaca
gaagggaagtatcgggcgctgaagatggagttttctctgccgtcctccacttacgccacg
atggcggtcagagaagtgctgaagatggacaccagcatcaagaaccagacgcagctgaac
accacctggctgaactga
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