Megalobrama amblycephala (Wuchang bream): 125261018
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Entry
125261018 CDS
T08212
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM7-like
KO
K10652
tripartite motif-containing protein 25 [EC:
2.3.2.27
]
Organism
mamb
Megalobrama amblycephala (Wuchang bream)
Pathway
mamb04622
RIG-I-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
mamb00001
]
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
125261018
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
mamb04121
]
125261018
Enzymes [BR:
mamb01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
125261018
Ubiquitin system [BR:
mamb04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
125261018
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SPRY
PRY
zf-RING_UBOX
zf-C3HC4_4
zf-C3HC4
zf-C3HC4_3
zf-B_box
zf-RING_5
zf-RING_2
zf-C3HC4_2
RING_XB3-XBAT31
U-box
ANCHR-like_BBOX
DUF4667
zf-UBR
zf_RING_Vps8
DUF1989
zf-rbx1
DUF7484
TRPM_tetra
Motif
Other DBs
NCBI-GeneID:
125261018
NCBI-ProteinID:
XP_048035517
LinkDB
All DBs
Position
Unknown
AA seq
541 aa
AA seq
DB search
MSQSKPEERLALELSCPICLQLYRDPVALPCGHNYCLGCIQNAAHAEDPKSPKRCPECRE
EYGSPEMLPKNFKLSGIVDGFLAATSGGGLRGGPTVPCDQCLDDPVAAVKFCTRCEMSLC
PGHLKRHEERHRSVHVLVELPIERNGKRCPVHLKVTEYLCAQERLFLCSDCLMEGTHQHH
EVQTFEVAKGEMMRILEELGKSVSDKLQMTETLLKSASEGPTDKAEDKLVARANILLENM
TSLISTYKSRMSTMMDDKLHSRDKSWQASLCDLEGCLHQLQEAQQCTRDVLNQSSEFLFI
QNYLGVEARVRQAANVTIPALPSQEPSNAKHLRSTLRTDAFHAEMSLLLECLHGIMNPLD
LTFNPATANPSLLLSTDLRTVKQCAGVKSSSSGEQSERFSSASQVMCTQGFSTGVHMWAV
EVGPGCAWSAGLCYKSIPRKGDHSRLGHNTSSWKLQWKSKKLMACHDSANVAVGDGLVMP
PKKVEVTLDYEGGTIAFHSSGQGGRKQHLHTFSCVFKDTVYPAFGLHSTSEDSWITLLSG
V
NT seq
1626 nt
NT seq
+upstream
nt +downstream
nt
atgtctcaaagtaaacctgaggagcgtcttgctttggagttgagctgtccaatctgtttg
cagctgtaccgtgatcctgtagcccttccttgtggacacaattactgcctgggttgtata
caaaatgctgcccacgcagaagatcccaagtccccgaaacgttgtccggagtgcagagaa
gagtacggcagtccggagatgcttccgaagaacttcaagctcagcggtatcgtggatggg
ttcctggcagccacttcaggcggtggattgagaggaggcccgacggtgccatgtgaccag
tgcctggatgatccagtggctgcggtgaaattctgcacacgctgtgaaatgtcactgtgc
cccggccacctcaagagacacgaggaacgacacagatcggtacacgtcttggtggagctg
cccatagaacggaatgggaagaggtgcccagtgcacttgaaggtgacggagtatctgtgt
gcgcaggaacgactgttcctctgctcagactgcctgatggagggcactcaccagcaccac
gaggtgcagacattcgaggtggcaaagggagaaatgatgagaattcttgaggaactgggg
aagtctgtgtccgacaagctacagatgacagaaactctcctgaaaagcgccagcgaagga
cctacggacaaggccgaagataaactggtggccagggcaaacatactgctggaaaacatg
acttcacttataagtacatacaagagtcgtatgagcaccatgatggacgacaaacttcat
tcgcgggacaaaagctggcaggccagtctatgtgatttggagggttgtctacaccagctg
caagaagcccagcagtgcactcgtgatgttctcaatcaatcctcagagtttctcttcatc
cagaactacctcggcgttgaagcaagggtccgccaggctgctaacgtcaccattcctgct
ctaccttcccaagagccctccaatgccaagcacctgcgctccaccctacgtacagatgcc
ttccacgccgagatgagtcttctgttggagtgcctccatggcataatgaaccctctagac
ctgaccttcaacccagccacagccaatcccagccttctgctgtccaccgatctcaggaca
gtcaagcagtgtgctggagttaagagcagtagctctggagagcagagtgagcgcttctcc
tcggccagtcaagtcatgtgcacgcagggtttctccacaggagttcacatgtgggcggtg
gaggtcggccctgggtgtgcgtggtctgcgggactgtgctataaaagcatcccacgtaaa
ggtgaccatagcaggctgggacataacaccagctcttggaagttgcagtggaaaagcaag
aagctgatggcatgccatgactcggctaatgtggctgtaggtgacgggctggtcatgccg
ccaaagaaggtcgaagtgaccctggattacgaaggtggaactattgccttccacagctca
ggtcaaggaggccgaaagcagcatcttcatacattcagttgcgtgttcaaggacacggtg
tatcctgcgtttgggctacactctacctcagaagattcatggataactcttttgagtgga
gtttga
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integrated database retrieval system
