Megalobrama amblycephala (Wuchang bream): 125261279
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Entry
125261279 CDS
T08212
Symbol
hmgb1a
Name
(RefSeq) high mobility group protein B1a
KO
K10802
high mobility group protein B1
Organism
mamb
Megalobrama amblycephala (Wuchang bream)
Pathway
mamb03410
Base excision repair
mamb04140
Autophagy - animal
mamb04217
Necroptosis
Brite
KEGG Orthology (KO) [BR:
mamb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
125261279 (hmgb1a)
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
125261279 (hmgb1a)
09143 Cell growth and death
04217 Necroptosis
125261279 (hmgb1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
mamb03036
]
125261279 (hmgb1a)
03400 DNA repair and recombination proteins [BR:
mamb03400
]
125261279 (hmgb1a)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
mamb04147
]
125261279 (hmgb1a)
Chromosome and associated proteins [BR:
mamb03036
]
Eukaryotic type
Nucleosome assembly factors
HMG (high mobility group) proteins
125261279 (hmgb1a)
DNA repair and recombination proteins [BR:
mamb03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Other BER factors
125261279 (hmgb1a)
MMR (mismatch excision repair)
Other MMR factors
125261279 (hmgb1a)
Exosome [BR:
mamb04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
125261279 (hmgb1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HMG_box_2
HMG_box
HMG_WDHD1
HMG_box_5
NOA36
Motif
Other DBs
NCBI-GeneID:
125261279
NCBI-ProteinID:
XP_048035832
LinkDB
All DBs
Position
LG2:complement(49315155..49318553)
Genome browser
AA seq
205 aa
AA seq
DB search
MGKDPTKPRGKMSSYAYFVQTCREEHKKKHPEATVNFSEFSKKCSERWKTMSAKEKGKFE
DMAKLDKARYEREMKNYIPPKGEKKKRFKDPNAPKRPPSAFFIFCAEFRPKVKEETPGLS
IGDVAKKLGEMWNKTSSEEKQPYEKKAAKLKEKYEKDIAAYRSKGKVGGATAKAPSKPDK
VNDEDDDDDDEEEEDDDDDDDEDDE
NT seq
618 nt
NT seq
+upstream
nt +downstream
nt
atggggaaggatccaacaaaaccaagaggcaaaatgtcctcatacgcatactttgtccag
acctgccgtgaggagcataagaagaaacaccctgaggcaacggtcaacttctcggagttt
tccaaaaagtgctctgagcgatggaagactatgtcagccaaggaaaaagggaagtttgaa
gatatggccaaacttgacaaggcacgttacgagagggagatgaagaactacattccaccc
aaaggcgagaagaaaaagaggtttaaagaccccaacgcacccaagagacccccgtctgca
ttcttcattttctgcgccgaattccgacccaaggtaaaagaagaaacccctggtctgtct
attggagatgtggccaagaaactgggtgagatgtggaacaaaacatcatctgaggagaag
cagccatacgagaagaaggctgccaagctgaaggagaagtatgagaaggacattgccgcc
tatcgctctaaaggcaaagtgggaggagccacagccaaagccccttccaagccagacaag
gttaatgatgaggatgacgacgacgatgatgaggaggaggaagatgacgatgatgatgac
gacgaggatgacgagtag
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integrated database retrieval system
