Megalobrama amblycephala (Wuchang bream): 125261329
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Entry
125261329 CDS
T08212
Name
(RefSeq) collagen alpha-1(XXV) chain-like isoform X1
KO
K24356
collagen type XXV alpha
Organism
mamb
Megalobrama amblycephala (Wuchang bream)
Brite
KEGG Orthology (KO) [BR:
mamb00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
mamb00536
]
125261329
Glycosaminoglycan binding proteins [BR:
mamb00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
125261329
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
Motif
Other DBs
NCBI-GeneID:
125261329
NCBI-ProteinID:
XP_048035855
LinkDB
All DBs
Position
Unknown
AA seq
418 aa
AA seq
DB search
MTALLTRPHPFTEIIQLSLTIEGEPGFFGPQGEPGLPGLPGTKGERGEPGPPGKGERGET
GPAGHKGEQGEPGAPGPKGSKGDAGDKGDVGPTGSQGPPGEKGEQGTTEIIDYNGNIQEA
LQKITTITVTIKTYLLCIKDQSSCECGSVCLGPFSAMYSECSGWICLNIAYGPPGPPGPV
GPKGMKGDQGVPGLPGLDGERGQKGSKGDMGIPGISGEKGSMGLPGLQGVNGLKGDKGDT
GLPGPQGPSIIGPPGAPGPHGPPGPMGPHGFPGPKGEPGLHGLKGLRGETGYKGDRGPLG
LPGASGLDGKPGPRGMDGPIGAPGPAGPKGDRGEKGDVGGPGPRGPYGLPGAAGTPGMDG
LPGLKGDKGDVGERGEKVHSRLCEALIETIEALRHQCFIRKLLHHYSSDFLFFRKRFI
NT seq
1257 nt
NT seq
+upstream
nt +downstream
nt
atgactgccctcttgaccagaccacacccatttactgaaatcattcaactgtcactaact
attgagggtgaacctggtttctttgggcctcaaggtgagcctgggcttccaggcctgcca
ggaactaagggtgagagaggggaacctggaccacctggcaagggtgaacgtggtgagaca
ggtccagcaggacacaagggagagcagggggaaccaggagcaccaggcccaaaaggttca
aagggggatgcaggagacaaaggtgatgtaggcccaacaggatcacaagggccacctggg
gagaaaggtgaacagggtacaactgaaatcatagactacaatggaaacattcaagaggct
cttcagaagataactactattacagttacgataaagacttatctcctatgtatcaaggat
caaagtagctgtgaatgtggttcagtctgcctaggccctttctcagctatgtattcagag
tgctctggttggatctgtttgaatatagcctatggtccccctggacctcctgggccagtt
ggaccaaagggaatgaagggtgatcagggtgttcctggacttcctggactggatggagaa
aggggtcaaaaaggttcaaagggtgatatgggaatccctggaatatcaggagaaaaggga
tcaatgggtcttcctggcttacagggtgtgaatggtctgaaaggagacaaaggagacact
ggcctgcctggtcctcagggaccatcgattattgggccccctggagcacctggtccacat
ggaccacctggacccatgggtcctcatggattccctggcccaaagggggaaccagggttg
catggtctcaagggactgcgaggggagactgggtataagggtgacagaggacccctgggt
ctccctggagcatctggcttggatggcaagccgggacccaggggtatggatggaccaatc
ggggctcctggtccagccggtccgaaaggagatagaggtgagaagggtgatgttggtggt
cctggacccagagggccatatgggttacctggagctgctggaacacctggaatggatggg
ttaccaggcttaaagggagacaagggcgacgtgggggaaagaggagaaaaggttcactca
aggctgtgtgaagcccttatagaaacaattgaggcattgcgtcaccagtgctttataagg
aagcttctgcaccattactcctcagatttcttattcttcaggaagcgatttatctag
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