Megalobrama amblycephala (Wuchang bream): 125261356
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Entry
125261356 CDS
T08212
Symbol
rsf1b.1
Name
(RefSeq) remodeling and spacing factor 1 isoform X1
KO
K11657
remodeling and spacing factor 1
Organism
mamb
Megalobrama amblycephala (Wuchang bream)
Pathway
mamb03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
mamb00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
125261356 (rsf1b.1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
mamb03036
]
125261356 (rsf1b.1)
Chromosome and associated proteins [BR:
mamb03036
]
Eukaryotic type
Chromatin remodeling factors
RSF complex
125261356 (rsf1b.1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PHD
WHIM1
DDT
WSD
Motif
Other DBs
NCBI-GeneID:
125261356
NCBI-ProteinID:
XP_048035891
LinkDB
All DBs
Position
LG2:complement(49405173..49423540)
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AA seq
1700 aa
AA seq
DB search
MSASEAADGSSTGLCPSFAVICSFLERYGALLDLPEVSFPMLERSLQESSAVPKLLVDLH
VKLLRKIGKSVSADRWEKNLIKICQEFNSTWAWELEKKGYREMTVECKTGILKYLCESQF
DDNVKFKTAINEEDPDKMRLQPIGKDKDGLMYWFQLDQDHNVRVYVEEQDDLDGSSWKCI
VRNRNDLAQILGLLKTQIDPALLVKKDQEEGSSSNSPNPDDEEKKKKEGAEVEVRDEKSQ
DDLSTSESKENILEQENTKQEDPEATDALSEKGLKVKEELQKHSETSNCTGVIAGSIKEE
PQDEEEKVKDLSTPSQTAEQMEDMKRKTLEETQRTLKNDHQAKIPLKKREMKLTEDFDGN
SAGVRNASVAPVKESRTCFDDNRLNAEKINGHVPLKPSESETQKGSESFQKETAENDSEN
LPRVLDESNERKKETKDDQTEDKMDTNETRLCAEEQMEVEKPGKSLAATADENKAKSEAP
QTHKKISGEEKLSTISEQSKKTPGSENITQNKKSPTCENMETTEANTSTLPEESTKDLSK
EESIQDLSKKEATKDLSKEEAKKDQLKEATKGLSKQQTIKDLPNKESLKDLTREVSMENL
PKDQPKEQSMKALSKEGSSKKETIKNLPNEESKKEEESQKVLTEESQKSPKDSDNSNKAL
ERQDPTASMAMETEPFQSSKMEESSSHEVIKPHSGTEKPQNTEEMKTHHSSADTTTEKKS
AAPVSKTEKQYMSEADKLSTKGESQSIASKPSENTGGPQDKAKERSASKSASRDPEKSSV
SDSMKKPSTPKTTEKVDGEEKCDTAESDKNSETTKEKDAKVEPANSSEESAAKKLVKEVK
ASEQPNEPNSSEKPPSEREHEKEPDSEEGNKEKQMEVDSEITKSDEVQSAVKEVCETTRA
SKKKTDVPVDQSSTSSKQSEQEATSEQREASGDVQEKSNAALKSSKRPGRPSKKSQESQD
EDKTGEEQEEKTDLQQEGIRLKIKIPAHRRKAELQKEEAKGDSESETTEGRCLRRSPRIC
RPTAKAVEIQDRRAERKQATPVSEKEKDEKEKDDNEEKEDEESVQRKPKKAEPDGQTKPK
QVGRRRKRQPWSRMRRKKKCSEDDDEEEESESEEEETEEDDSDEDYKVEKTRKRRRNRNR
ERNSSDSSTSSSEDDQPNDDPCKHCGLPNHPELILLCDSCDSGYHTACLRPPLMIIPDGE
WFCPPCQHKQLCDRLEEQLLNLDAALKKKERAERRKERLVYVGISVENIITPSVEVEEEK
EEEVVNEKETKKSKSWGRRSTRAKKYISYRFDEFDEAIEEAIEEDIKEAEGGGAGRGKDM
ANITGHRGKDISTILQEDGKENGRPRRPSAAQKKKRRRLNDLDSDSTVDEEESEDEFRLS
DSSSEEEEFVASDNEAESEAEAPSLDDSDFGSDAEGPQIKTSNRRAARCRNRRQPPRRRR
RPRGYSDEEELETDEDEEEDEMVTEGSSEFSDSDLDIRYRRSYRSRKQQVNYCESSDTDG
SQASTNRDKKKRRRLSSSDSEVSFQSAESDEEDRKPKKKRADSSEEESRKRRRRLSLKRR
RESEDDDEDGDDSDESEEEERPVRKRVNRIDSDDSEGEEEEEEVKKSPLEKETEETVGKG
PSPLDYNLVELPPTNGQSPMKGLEGLMPRPGVGVTPKNGSAPSAVTIAPNGLEIPAQDED
EDDLLGVTDLVDYVCNSEQL
NT seq
5103 nt
NT seq
+upstream
nt +downstream
nt
atgtctgcctcggaggcagcggacggttcttccacgggattatgcccgagcttcgccgtg
atctgctcgtttctggagcggtatggagctctgctggaccttccggaggtgtctttcccg
atgctggagcgcagtctgcaggagagcagcgcggtacccaaactcctcgtggaccttcat
gtgaagttgctgaggaaaattggcaagtctgtgtctgcagacagatgggagaagaatctc
attaagatctgtcaggagtttaactccacatgggcatgggagctggaaaagaagggttat
cgagagatgacagtggagtgtaagacaggaatactgaagtacttgtgtgaaagccagttt
gatgacaatgtcaagtttaagactgctatcaatgaagaggacccagataaaatgcgtctt
cagcccatcggcaaagacaaagatggcctcatgtactggttccagctagatcaagaccat
aatgtgagggtctatgtggaagaacaggatgatctggatgggtcatcctggaagtgtata
gtaagaaacagaaacgacctggctcagatccttggtctgttgaagactcagattgatcca
gcactcctagtaaagaaggatcaggaggagggctcgtctagtaacagtccgaacccagac
gatgaggagaaaaagaagaaagagggagctgaagtggaggtcagagatgagaagtcgcaa
gacgatttatccacatctgaaagtaaggaaaacatcttggagcaagaaaatacaaagcaa
gaagatccagaggccacagatgctttgtcggaaaagggcttgaaggtgaaggaagagtta
cagaaacattcggagacgtcaaattgcactggcgttattgctggatctatcaaagaagag
ccacaggatgaggaggagaaagtcaaggacttgtcaacaccttcacagactgcagaacag
atggaggacatgaaaagaaaaaccttagaagagactcagagaactttgaaaaatgaccat
caagctaaaatccctctgaaaaagcgagagatgaaactaaccgaagactttgatggcaac
agtgcaggagtacgaaatgcatctgtcgctccggtgaaagaatcacggacatgtttcgat
gacaacagattgaatgctgaaaagatcaatggccacgtccctcttaaaccatctgagagt
gaaacgcaaaaaggttcagagagttttcaaaaagaaacagcggagaatgattccgaaaat
ctcccacgtgtcttagatgaatccaatgagagaaaaaaggagacaaaggatgaccagaca
gaggataagatggacaccaatgaaaccagattgtgtgctgaagagcagatggaagtggag
aagcctgggaaatcccttgcagccactgcagatgagaataaagcaaaatctgaagctcct
caaactcacaaaaagatctctggggaagaaaaactctcaacaataagtgagcagtcaaaa
aagacacctggttctgaaaatataacccaaaataaaaaatctcccacttgtgaaaatatg
gaaactacagaagcaaatacatcaacactgcctgaagagtcaacaaaagatctctcaaaa
gaagaatcaatacaagatctctcaaaaaaggaagcaacgaaggatctctcaaaagaagaa
gcaaagaaagatcaattaaaagaagcaacgaaaggtctgtcaaaacaacaaaccataaaa
gatctcccaaataaagaatcattaaaagatctcactagagaagtgtcaatggaaaatctc
ccaaaagatcagccgaaagaacagtcaatgaaagctctctcaaaagaagggtcatcaaaa
aaagagacaataaagaatcttccaaatgaagaatcaaaaaaagaagaagagtcacagaaa
gttctcacagaagaaagtcaaaaatctcccaaagactcggacaactccaataaagccctg
gaaagacaagatccaactgcttccatggcgatggaaactgaaccattccagtcatctaaa
atggaggagtcctcttcccatgaagtaatcaaaccacattctggcacagaaaagccacag
aacactgaagaaatgaaaactcatcacagctctgcagacaccaccacagaaaaaaagtca
gctgcccctgtctcaaaaactgaaaaacagtatatgtctgaagcagacaaactctcaacc
aagggtgaaagccagtccattgcctctaaaccttctgaaaatacaggtggccctcaagac
aaagcaaaagagcggtctgcctccaagtcggcatcaagggatcctgaaaaatcatctgtt
tctgattcaatgaagaagccaagtacgccaaaaaccacagagaaagtagatggtgaggaa
aaatgtgacacagctgaatcggataaaaattcagaaacgacaaaagaaaaagatgcaaag
gttgaacctgcaaacagctctgaagaatctgcagcgaaaaaattggttaaagaagttaaa
gcttcagaacaacccaatgaacccaacagttctgagaaacctccttctgaaagagaacat
gaaaaggaaccagattcagaggaagggaacaaagagaagcaaatggaagttgattcagag
atcactaaatctgatgaagtacaatcggctgttaaggaggtatgtgagactacaagagca
agtaagaagaaaactgatgttcctgtggatcaaagcagcacctcaagcaaacaatctgag
caagaagcaacttctgaacaacgtgaggcttcaggtgatgttcaagaaaagagcaacgca
gctctgaaaagcagtaaaagaccaggacggccttcaaagaaatctcaggagagtcaggat
gaggataaaacaggagaagaacaagaagaaaagactgacttgcaacaggaaggaattcgt
ctgaagattaaaatcccagctcacagacggaaggccgaactccagaaagaagaggccaag
ggagattcagagtctgagacgactgagggcagatgcttgcggaggtctccgagaatctgc
aggcccactgctaaagctgtcgagatccaggataggagggcggaacggaagcaggcgact
ccagtgtcggagaaagaaaaggatgagaaagaaaaggatgacaatgaagaaaaagaggat
gaggaatctgttcagaggaaaccgaagaaagctgagccagatggccaaacgaaaccaaag
caggtggggagacgtcgaaaacgacaaccatggtctcgaatgagacgtaaaaagaaatgt
tctgaagatgatgatgaggaagaggagagcgagagtgaggaagaggagacggaggaggat
gacagcgatgaagactacaaggtggagaagaccagaaagagaaggagaaaccgaaaccga
gagcggaacagctctgactcctctacctcttcatcagaagatgatcaacccaatgatgac
ccctgcaaacactgtggccttcccaatcatcccgagctgatactcctgtgtgattcctgt
gacagcggctaccacactgcctgtctgcggcctccgctcatgatcattccagatggggaa
tggttctgtcctccctgccagcataaacaactttgcgacaggcttgaagagcagttgctg
aatttggatgccgccctcaaaaagaaagaacgtgcagaaagaaggaaagagcgactggta
tatgttggcatcagcgtggagaacatcattacaccctccgtggaagtggaagaagaaaag
gaagaggaggtggtgaacgagaaggagacaaagaagagcaaaagttgggggcgtagatca
accagggcaaagaaatacataagctacagatttgatgagtttgatgaagcgatcgaagag
gcaatcgaggaagacatcaaagaggcagaggggggaggagcaggccgggggaaggacatg
gcgaacatcacaggccacagagggaaggacatatccacaatcctacaggaggatgggaaa
gagaacggccgaccgcggagaccaagtgcagctcagaagaaaaagaggcggcgtctcaac
gatctggacagcgacagcactgtggacgaagaagagagcgaagacgagtttcgtcttagt
gacagcagttcagaagaggaggagtttgtggcttctgataacgaagcagagagtgaagca
gaagccccgtccttggatgacagtgactttgggagtgatgcagaaggcccgcagataaaa
acttcaaacagacgggcagcacggtgtcgaaacagaagacagccgccacgcaggagacgc
agacccagaggatactctgatgaagaggagctggaaactgatgaagacgaggaagaggac
gagatggtgacggaaggctctagtgaattcagtgacagcgatctggacatccgctatcgg
cggtcctatcgaagccgtaagcaacaggtgaattactgtgaaagttcagatactgatggc
tcacaggccagcaccaacagagacaaaaagaaacgcagacgtctttccagctctgacagt
gaagttagtttccagtcagctgaatctgatgaagaagacaggaagcccaagaagaaaagg
gcggactcgtccgaggaagaatccaggaaacggcgcagacgcctgtcccttaaacggcgg
agggagtcggaggatgacgacgaagacggcgacgattcagacgaatccgaggaagaggaa
cggcccgtccggaagcgtgtgaaccgcatcgactctgacgacagcgaaggtgaagaagaa
gaggaggaggtgaagaagagcccgctggagaaagagacagaggagaccgttggcaaaggg
cccagtccactagactacaacttggtcgagcttcctcccactaatggacaaagcccaatg
aagggtttagagggcctcatgccacgacccggggtgggagtgacgcctaaaaatggcagc
gccccttcggctgtaaccatagcgccgaatggcctggagattcccgcacaggacgaagat
gaagatgaccttttgggcgtcacagacctcgtagactatgtctgcaacagtgaacagtta
taa
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