Megalobrama amblycephala (Wuchang bream): 125262449
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Entry
125262449 CDS
T08212
Symbol
sbno1
Name
(RefSeq) protein strawberry notch homolog 1 isoform X1
KO
K26273
protein strawberry notch
Organism
mamb
Megalobrama amblycephala (Wuchang bream)
Brite
KEGG Orthology (KO) [BR:
mamb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
mamb03036
]
125262449 (sbno1)
Chromosome and associated proteins [BR:
mamb03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
125262449 (sbno1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_34
Helicase_C_4
ResIII
Helicase_C
Motif
Other DBs
NCBI-GeneID:
125262449
NCBI-ProteinID:
XP_048037178
LinkDB
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Position
LG2:58247670..58268360
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AA seq
1402 aa
AA seq
DB search
MDPGQDLLLAALSESGICPNDLFDVDPQDTLPLPASQQSVSLNALDIGLGNEASGIVRIE
PAVPPTPTVTIREKPQPSTTTFVLNQLNQLPSLGTIVVTKPSAGTASRQTITVTKVVHTG
STAQRSSASSPTVVPPNNDQIRLKDLLRTSSLKTSSLGELMKLKPPPDIAQPVATATATG
TKIILVSTKMMSRSAELNNGLKKEVSSKDVARIWVNDDMKMRSFSPVNKLPGMKEEDEPE
EEEEEELGHAETYAEYMPMKLRIGLRHPDPVVETSSLSSVNPPDVWYRLSIPEETIDRGW
LSALQLEAVTYASQQHETFLPNGDRAAYLIGDGAGVGKGRTIAGIIYENYLLGRKRSLWF
SVSNDLKYDAERDLRDIGAKNIQVHSLNKFKYGKISSKHNGSVKKGVIFATYSSLIGESQ
SGGKYKTRFKQLLHWCGDDFDGVIIFDECHKAKNVCPIGSSKPTKTGLAVLELQNKLPKA
RVVYASATGASEPRNMAYMNRLGIWGEGTPFKEFTNFIQAVERRGVGAMEIVAMDMKLRG
MYIARQLSFTGVTFKIEEVPLTQSYIKMYNKSVRLWVSAREKFQQAANLMDAEQRMKKSM
WGQFWSAHQRFFKYLCIASKVRRVVQLAREEVKNGKCVVIGLQSTGEARTLEALEEGGGE
LNDFVSTAKGVLQSLVEKHFPAPDRQKLFSLLGIDLSAKKTPSPSETTTEQKGKKRKGPE
TKKQVKKARKSGGLSGSSSDESNSDDSDKDAESDDSFKSVSSGEEDEDDFNPFKDDSSED
EEDDPWLIRKDSKKSKDKRNKKKKKSIDPDSIQSALLASGLGTTRPTFTTPTIKPSNNTV
TVAKSEPEESSCVTSQDAVEDAQRMKRDLLDRLEQLAEDLPPNTLDELIDELGGPDNVAE
MTGRKGRVVSNDDGSISYESRSELDVPVEILNLTEKQRFMDGDKNIAIISEAASSGISLQ
ADRRVKNQRRRVHMTLELPWSADRAIQQFGRTHRSNQVTAPEYVFLISELAGEQRFASIV
AKRLESLGALTHGDRRATETRDLSRFNFDNKYGRNALEIVMKSIVSLDSPLVSPPADFDG
DFFKEIRNGLIGVGLINVEDRSGVLSLDKDYNNIGKFLNRILGMEVQQQNALFQYFSDTL
SAVIQNAKKTGRYDMGILDLGSGDEKVKKVDVKKFLTPGYSTSGHVELYTVSVERGMSWE
DATHVWADQNGPDDGFYVQVRNNKKIAILIKEVNPRKRLFMVYRPNIGKQVKLETYADLK
KRSKKVLSDDAKQHWIDQYNSSAEVCSHAYWRGNCKKVSVGLQCEIGLRCRTYYVLCGSV
LSVWTKVEGVLASVSGSNVKMQIVRLRTEDGQRIVGLIIPANCVSPLMNILSSSDQSQQL
AVQQQQMWQQLHPQSISHTGNT
NT seq
4209 nt
NT seq
+upstream
nt +downstream
nt
atggatcctggacaagatttgcttctggctgctctaagtgaaagtggaatctgccctaat
gatctgtttgatgttgatcctcaggacacacttccactccctgcctcacaacagtcagtc
tcattaaatgcacttgacatcggtctcggtaatgaagcttctggaattgtcagaattgaa
cctgcagttccacctactcctacagttacaatcagggagaagcctcagccctcaactacc
accttcgttttaaatcaactgaatcagttgccatcgctgggtaccattgtagtcaccaaa
ccatcagctgggaccgcctccaggcagaccatcacagtgaccaaggtggtacacacaggt
tcgacagcacaacggagctctgcgtcctctcccaccgtggtcccacccaataatgatcag
atcaggttgaaggacctcctcagaaccagcagcctgaagacaagcagccttggagagctt
atgaagttgaagcccccacctgacatagcgcagcccgttgctacggcaacagccacaggc
acaaaaattattctggtctccacaaagatgatgagcagatcagcggaattaaacaatggc
ttgaaaaaagaagtttccagcaaagatgtagcaaggatctgggtcaatgatgacatgaaa
atgcggagcttctcacctgtaaataaattaccaggaatgaaggaggaagatgaaccagaa
gaagaggaagaggaggagctgggtcatgcagagacgtacgccgaatacatgccaatgaaa
ctgagaattggactgcggcaccctgatcctgttgtggagaccagctctctttccagtgtc
aacccgccagatgtgtggtacagactttccattccagaggagaccatcgatagaggctgg
ttatctgccctccagcttgaggccgtcacgtatgcttctcagcaacatgagacattccta
ccaaatggagaccgagcagcctacttgattggagatggagccggtgttggaaagggtaga
accattgctggaatcatatatgaaaattatcttcttggcaggaaaaggtccctctggttt
agtgtctcaaatgacttgaaatatgatgcagagagggacttgagagacatcggagcaaag
aacatccaggtccattcgctaaacaagttcaaatacggaaagatctcatcgaaacacaat
gggagtgtgaaaaaaggtgtgatctttgccacatactcgtctctgattggagagagccag
tctgggggaaaatacaagacgagattcaaacagttactgcactggtgtggagatgacttt
gatggtgttatcatctttgatgagtgtcacaaagccaaaaatgtttgccctattgggtca
tccaagcccacaaagaccgggttggcagttttagagctacagaacaagctgccaaaagcc
cgagttgtgtacgcaagtgctacaggagcatccgaaccccgcaatatggcctacatgaat
cgccttgggatctggggagaaggaactccgtttaaggaatttacaaattttatccaagct
gttgagagaagaggtgttggtgccatggagattgttgccatggatatgaagctgagagga
atgtacatcgctcgacagctgagcttcacaggcgtgacgtttaaaatcgaagaagttcct
ttgacgcagagctacatcaagatgtacaacaaatcagtccgcttgtgggtcagtgcaaga
gagaagttccagcaagccgccaacttgatggatgcagaacaacgaatgaaaaagtccatg
tggggtcagttttggtcagctcatcagaggttcttcaagtacctgtgcattgcttctaag
gtccgaagagtggtgcagctggcccgagaggaagttaaaaatggaaagtgtgtggtgatt
ggtcttcaatcaactggagaagctcgaacccttgaggccttggaggagggaggaggcgag
ctcaatgactttgtctccactgcaaagggtgtcctacagtccttggtggagaagcatttt
cctgcaccagacagacaaaaactcttcagtcttttaggcatcgacctgagcgcgaagaaa
actccttcaccttcagaaaccaccactgagcagaaaggcaaaaagcggaaaggtccagaa
actaagaagcaagtgaagaaggctcgtaaatctggtggtctgtctggttccagctcagat
gagagcaactcggatgattctgacaaagatgcagaaagcgatgacagcttcaagtcggtc
agctcaggggaggaggatgaagatgacttcaacccatttaaggatgattctagtgaggat
gaggaagatgatccgtggctcatcagaaaagactctaaaaagagtaaagacaagaggaac
aagaagaagaaaaagagcatcgatccagactccattcaaagtgccttgttagcctccggg
cttgggacaaccagacccacttttacaacccccaccatcaaaccttcaaacaacacggtt
actgtcgccaaaagtgagccagaggagagcagctgtgtgaccagtcaggatgctgttgag
gacgcccagcggatgaagagggacttgctggatcgactggagcagctggcagaggatcta
ccaccaaacacgctcgatgagctcatcgatgagctgggaggccctgataacgtcgcagag
atgacaggccgcaaaggcagggtagtcagcaacgatgatggcagcatttcctacgagtct
cgatcagaacttgacgtcccagttgaaatcctaaacctcacagagaagcagaggttcatg
gatggagataagaacatcgcaattatctcagaggctgccagctctggtatttctcttcaa
gctgaccgcagagtgaagaaccagaggaggagggtacacatgacgttagagctgccctgg
agtgctgatagagctattcagcagtttggtcgaacacacagatccaaccaggtcacagca
cctgagtatgtgttcctcatctctgaactcgctggagagcaacgattcgcctctattgtt
gccaaaagactggagagcctgggtgctttaacacatggagacagaagggccacagagact
agagatctcagccgatttaactttgacaacaaatatggcagaaatgctctggaaatagtc
atgaagtctattgtaagtctggactctcctctggtgtctccacctgctgacttcgatggg
gatttctttaaagaaatccgcaatggtttaatcggagtgggtctgataaatgtggaggat
agatctggtgttctctcactagacaaagactacaacaacattggaaagttcttgaacagg
attcttggtatggaggtccagcagcaaaatgcgctctttcagtatttctctgacactttg
agcgccgtcattcagaacgccaaaaagactggaagatatgacatgggaattttagatttg
ggctctggagatgagaaagtaaagaaagttgatgtaaagaaattcttgacaccaggatat
tccacctcagggcatgtggagctctatacagtgagtgtggagcggggaatgtcatgggag
gatgccacccacgtctgggccgaccagaatggaccggatgatggtttttacgtccaggtg
cggaataacaagaaaattgccatccttataaaggaggtcaatcccagaaagagactcttc
atggtgtacagaccaaatatcggaaaacaagtaaaactggagacttacgcagacctcaag
aagagaagtaaaaaggtcctctctgatgatgccaagcagcactggattgatcagtacaac
tcctcggccgaggtctgctcacatgcgtactggcgagggaactgtaagaaggtgtcggtg
gggctacagtgtgagatcgggctgcggtgcaggacatactacgtcctctgtggctccgtc
ctcagcgtgtggaccaaagtggagggcgtactggcttcagtcagcggatccaatgtgaag
atgcagattgtacgtttgagaacagaggatgggcagagaattgtgggtctgatcattccc
gccaactgcgtgtcgcccctgatgaacatcctgtcctcatcagatcagtctcagcagctg
gctgtgcagcagcagcaaatgtggcagcaactccatccgcagagcatcagccacaccggc
aacacatag
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