Megalobrama amblycephala (Wuchang bream): 125262514
Help
Entry
125262514 CDS
T08212
Symbol
ddx55
Name
(RefSeq) ATP-dependent RNA helicase DDX55
KO
K14809
ATP-dependent RNA helicase DDX55/SPB4 [EC:
5.6.2.7
]
Organism
mamb
Megalobrama amblycephala (Wuchang bream)
Brite
KEGG Orthology (KO) [BR:
mamb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
mamb03009
]
125262514 (ddx55)
Enzymes [BR:
mamb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
125262514 (ddx55)
Ribosome biogenesis [BR:
mamb03009
]
Eukaryotic type
Pre-60S particles
Helicases
125262514 (ddx55)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DUF4217
ResIII
SBF_like
Helicase_C_2
YbjM
TFIIF_alpha
Motif
Other DBs
NCBI-GeneID:
125262514
NCBI-ProteinID:
XP_048037262
LinkDB
All DBs
Position
LG2:complement(59892236..59900043)
Genome browser
AA seq
597 aa
AA seq
DB search
MENITDGKWESLPVKLHESILQTLTELKFTYMTPVQAACIPLFMSNKDVAAEAVTGSGKT
LAFVIPILEILLKREEKLKKMQVGALIITPTRELALQISEVMGQFLQGFPQFRQILLIGG
SNPIEDVEKFKTQGANIIIATPGRLEDMFRRKADGLDLATAVKSLDVLVLDEADRLLDMG
FEASLNTILGYLPKQRRTGLFSATQTQELEKLVRAGLRNPVRITVKEKGVEASSVQKTPS
RLSNYYLMCRAEEKFNTLVAFLRQHKHEKHLVFFSTCACVEYFGKALEVLIKNVSIHCIH
GKMKHKRNKIFADFRALKSGILVCTDVMARGIDIPEVNWVLQYDPPSSASSFVHRCGRTA
RIGNQGNALVFLLPMEESYVNFLSINQKCPLQLFPPVKDVVDVLPKLKAMALQDRAMFEK
GMKAFVSCVQAYAKHECSLIFRIKDLDFAALAHGFALLRLPKMPELKGKTFPNFKQESID
TDTIRFKDKNREKQRQKRLAEQKEKVKEAPLRKNFIKNKAWSKQKIKKDRKKKKAAKRKM
DEESDVDNEDLNELLSDTRLLKKLKKGKISEEDFDKHLSSAGSSHPKRADKHSPDGE
NT seq
1794 nt
NT seq
+upstream
nt +downstream
nt
atggaaaacattaccgatggaaaatgggagagtttacctgtgaaattacatgaaagcata
ttacagacgcttacagagctgaaatttacatatatgactcctgttcaggctgcctgcatc
cctctctttatgagtaataaagatgtggctgctgaagcggtgactggcagtgggaagact
ctggcatttgtgattcctatattagaaattctcctaaagcgagaagagaagttaaaaaag
atgcaggtgggtgcattgatcataacgcccacccgtgagctggcgctgcagatcagtgag
gtgatgggccagtttctgcaggggtttcctcagtttagacagattctcttaattggtgga
agcaaccctattgaggatgtagagaagtttaagactcagggagccaatatcataattgcg
acccctggccgattagaggacatgtttaggaggaaggcagatggacttgatttggccacc
gctgtgaagtctctggacgttctagtcctggatgaggctgaccgattgctggacatgggc
tttgaagccagtttaaacactattctggggtatttgcccaagcagcggcgcacagggctt
ttctccgccacacagacgcaagagctggagaagctggtgagggcgggtctgcgcaaccct
gtgcgtatcacagtgaaggagaaaggagtggaggcctcgagcgtgcagaaaaccccatcc
agactcagcaattattacctaatgtgtcgagcagaggagaagttcaacactttggtggcg
tttctcaggcagcataaacatgagaagcatcttgtgttcttcagcacctgcgcctgtgtg
gagtacttcggtaaagccctggaagtcttgatcaagaacgtcagcatccactgcatccac
gggaagatgaaacataaacgaaacaagatctttgcagatttccgtgcgctgaagagtggg
attctcgtgtgcacagacgtcatggcgagaggcatcgacatacctgaagtcaactgggtg
cttcagtatgaccccccaagcagtgcgagttcctttgtgcatcggtgtggacgaacggcg
cgcatcggaaaccaaggcaacgcacttgtgtttctcctaccaatggaagagtcatatgta
aattttttgtccattaatcaaaagtgtccccttcagttgtttcctccagtgaaagatgtg
gttgacgttctgcctaaactgaaggcgatggctttacaggacagagcaatgtttgagaag
ggcatgaaagcctttgtatcatgtgtgcaggcgtacgccaaacacgagtgtagtttgata
tttcgcattaaagacctggattttgctgctctggcgcatggcttcgctctccttcgtttg
cccaaaatgcctgaactgaaaggaaagaccttcccgaacttcaaacaggagagcatcgac
acagacaccatccggtttaaagataaaaacagggagaaacagagacaaaaaagactggca
gagcagaaagagaaagtgaaagaggcgccattgaggaagaacttcatcaagaacaaagcc
tggtccaagcagaagatcaagaaggatagaaagaaaaagaaggccgccaaaagaaaaatg
gatgaggaatcagatgttgacaacgaagacttgaacgagcttttaagtgacacgcgtctg
ctgaagaaactcaagaaaggaaagatcagtgaagaggactttgacaagcacttgagttca
gcaggaagttcacatcccaaaagagcagataaacacagtcctgatggagaatga
DBGET
integrated database retrieval system
