Megalobrama amblycephala (Wuchang bream): 125262546
Help
Entry
125262546 CDS
T08212
Symbol
pdlim5b
Name
(RefSeq) PDZ and LIM domain protein 5b isoform X1
KO
K19867
PDZ and LIM domain protein 5/6/7
Organism
mamb
Megalobrama amblycephala (Wuchang bream)
Pathway
mamb04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
mamb00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
125262546 (pdlim5b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
mamb04990
]
125262546 (pdlim5b)
Domain-containing proteins not elsewhere classified [BR:
mamb04990
]
LIM domain-containing proteins
PDZ-LIM family proteins
125262546 (pdlim5b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LIM
PDZ
DUF4749
PDZ_6
zf-C3HC4_3
PDZ_2
LIM_FHL2-3_N
Motif
Other DBs
NCBI-GeneID:
125262546
NCBI-ProteinID:
XP_048037310
LinkDB
All DBs
Position
LG2:61557908..61663592
Genome browser
AA seq
620 aa
AA seq
DB search
MSSSYSVSLIGPSPWGFRLQGGKDFSMPLTISKLTDGGKAAKAKISVGDVVLSIDGIATE
GMTHLEAQNKIKACTGNLNLSLLRSSSVNKTETPKEEPLEIIKPVPINQTPAPATSLAPG
SSAYNKTARPFGGAASTVRSVSPSPAPTAPKASIPSASSAFTPAAPSQQPPQPPFPLSSS
AHRSLSSPSSAPKPASGRSPFANSSSTSSSGSSSPARVTAPPPPPAPAAPQPSVYNTPIN
LYSNENACEVAIGQRRGLMESKVTGEHHNGKTPPRTARKPVLEPELNHVSPLSDSSKKRL
MEDTEDWHPRTGTSQSRSFRILAQITGTENDQAQENRPGKNEAAEEAQPSSHVTSSVKTM
TKTPAGAPRQGNGVPPPAAKSWHSGNAAGLPKAGAPAPQTGRVSSSLPKGAPSRPAPQAH
PSDQDDSLVQRAEHIPAGTRTPMCAHCNMVIRGPFLVAMGKSWHKEEFNCSHCHSTLADV
GFVEERGSVYCERCYEQFLAPTCFRCQQKVLGEVINALKQTWHVYCFLCASCQQPIRNNT
FHLEDGQPYCETDYYTLFGTGCHGCDFPIEAGDKFLEALGFTWHDTCFVCAVCSTSLEGQ
TFFSKKDKPLCKKHAHTVQF
NT seq
1863 nt
NT seq
+upstream
nt +downstream
nt
atgagcagcagctacagcgtgtccttgattggaccttccccatggggcttcagacttcag
ggtggcaaggacttcagcatgcctctcaccatctccaaactgacagatggaggaaaggca
gctaaagccaagatcagcgtcggggacgttgtgttgtctatcgatggcatcgccacggag
ggaatgacccacctggaagcccagaacaaaatcaaagcctgtacggggaacctgaacctc
tctctgctgagatcttccagtgtcaataaaactgagactccaaaggaagaaccactggag
atcataaagcctgtgcccatcaaccaaacgcctgcacccgccaccagtctcgccccgggc
agcagcgcttacaataagaccgcgcggccgttcggcggggccgctagcactgttcgatcc
gtcagtccgtctccggcgcccaccgcacccaaggcctccatcccctccgcatcttctgca
ttcactccagctgctccttcccagcagcctccacaaccacccttcccgctcagtagctcc
gcccaccgctcgctgtcctcacctagctccgcccctaaacccgcctctggccgctccccc
ttcgccaactcttcttccacgtcctcctctggctcctcctccccggcgagagtgacagct
cctcctcctcccccggcccccgccgctcctcagccgtccgtctataacacgcccatcaac
ctctactccaatgagaacgcgtgtgaggtggctataggccagaggcgtggcctgatggag
agtaaagtcacaggagaacaccataacggaaagactcctcccagaacggcccggaagccc
gtcctggagccggagctgaaccacgtctctcctctcagcgactccagtaagaagcgtctg
atggaggacacggaggactggcacccgcgcaccggcacgtctcagtcgcgctccttcagg
atcctggcgcagatcaccggcacagagaacgatcaagctcaggagaaccggcctggaaag
aacgaggccgcagaggaggctcagcccagctctcatgtcacgtcttctgtcaaaacgatg
accaaaactcccgccggagctcctcgacagggcaacggcgtccctccacctgcggccaaa
agctggcattctgggaacgctgcagggcttcccaaagcaggtgcacctgcgccgcagacg
ggacgggtcagcagcagccttccgaagggggcacccagtcgccccgcgcctcaagctcac
cccagcgaccaggacgattcgctggtgcagagagccgagcacatcccggcgggaacacgg
acgcccatgtgcgctcactgcaacatggtcatcaggggtccgttcctggtggccatgggc
aaatcgtggcacaaggaggagttcaactgctcgcactgccacagcacactggcagacgtg
ggattcgtggaggagcgcggctccgtctactgcgagcgctgctacgagcagtttctggcc
ccgacctgcttccgctgccagcagaaggttctgggggaagtcatcaacgccctgaagcag
acctggcatgtgtactgcttcctgtgcgcctcctgccagcagccaatccgcaacaacacc
ttccacctggaggacggacagccgtactgtgagacggattactacaccctcttcggcacc
ggctgtcacggatgtgactttcccatcgaagcgggcgacaagttcctggaggcgctggga
ttcacctggcacgacacctgcttcgtgtgtgcagtgtgcagcacgagtctagagggtcag
accttcttctccaagaaagacaagcccttatgcaagaaacacgctcacacggtccagttc
tga
DBGET
integrated database retrieval system
