Megalobrama amblycephala (Wuchang bream): 125263280
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Entry
125263280 CDS
T08212
Symbol
rad23ab
Name
(RefSeq) RAD23 homolog A, nucleotide excision repair protein b
KO
K10839
UV excision repair protein RAD23
Organism
mamb
Megalobrama amblycephala (Wuchang bream)
Pathway
mamb03420
Nucleotide excision repair
mamb04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
mamb00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
125263280 (rad23ab)
09124 Replication and repair
03420 Nucleotide excision repair
125263280 (rad23ab)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
mamb03051
]
125263280 (rad23ab)
03400 DNA repair and recombination proteins [BR:
mamb03400
]
125263280 (rad23ab)
Proteasome [BR:
mamb03051
]
Eukaryotic proteasome
Proteasome interacting proteins (PIPs)
UBL-UBA shuttle proteins
125263280 (rad23ab)
DNA repair and recombination proteins [BR:
mamb03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
XPC-HR23B-CETN2 complex
125263280 (rad23ab)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
XPC-binding
UBA
ubiquitin
UBA_7
Rad60-SLD
UBA_3
Crinkler
Rad60-SLD_2
Dsc3_N
UBA_2
Ubiquitin_2
Ubiquitin_4
Motif
Other DBs
NCBI-GeneID:
125263280
NCBI-ProteinID:
XP_048038237
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Position
LG2:complement(5629827..5641467)
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AA seq
416 aa
AA seq
DB search
MLTITLKTLQQQTFKVQIDEELTVKALKEKIEEEKGQDAFPAVGQKLIYAGKILNDDIPL
KEYKIDEKNFVVVMVTKPKSATPPQAPAPAPVSVPLAETPVHQPTAPAAPPAASTVPVST
PAPAPVEPAASAEPAALPVTAPPAASEATAETPEPVSATPAPISEEENLAAQEEQAIAQS
EASIIDELGLLEAAASILVTGQAYENLVTEIMSMGYEREQVIAALRASFNNPDRAVEYLL
MGIPTESEQPPQEVVRPTAVPNPTPPAPQRPQPPPTATAGAESGAVQPTANPLEFLRNQP
QFQQMRQIIQQNPALLPALLQQLGRDNPQLLQQITQHQERFVQMLNEPHPGEAGAAEAPA
APQTNYIQVTPQEKEAIERLKALGFPEGLVIQAYFACEKNENLAANFLLQQNFDDE
NT seq
1251 nt
NT seq
+upstream
nt +downstream
nt
atgctgacgatcactctgaagacgctccagcagcagacgtttaaagtgcagatagatgag
gaactgacggtaaaggctcttaaagagaagatagaggaagaaaaggggcaagatgctttt
ccagctgtcggtcaaaaactaatctatgcaggcaaaattttgaatgacgatatacctcta
aaagaatacaaaatagatgagaagaactttgttgtggtgatggttacaaagcccaaatct
gcaacaccgccacaagctcccgctcccgctcccgttagcgtgcccctcgccgaaaccccc
gtccatcagcccacggctcctgctgcgcctcctgctgcctccacagtgcctgtatcaacc
cctgctcccgctcctgtagaaccagcggcgtcagcggagccggctgcgctgcctgttaca
gcgccccctgctgcctcggaggctactgcggaaacgccagagccagttagcgccactcct
gctccgatctcagaagaggagaacctggccgcccaagaagagcaggccatcgcccaatca
gaggccagcattatagatgagttgggtcttttagaagcggctgcatccatactagttacg
ggtcaagcatatgagaatttggtgacggaaatcatgtcaatgggttatgagagggaacag
gttatcgccgccttacgagcaagtttcaataatccggacagagccgtggagtacctgctt
atgggtattcccacagaatccgagcagccgccacaggaagtagttcggcccactgccgtg
ccaaaccccacccctcccgcaccacagcgacctcagcctccacccaccgccacagccggt
gcggagtccggagccgtgcagccgacggcaaacccgctggagttcctgaggaaccagcca
cagttccagcagatgcggcagatcatccagcagaacccggcgctcctgccggcactgctg
cagcagctgggacgagacaacccacaactcctgcagcaaatcactcagcatcaggaacgg
tttgtgcagatgttgaacgagccgcacccaggcgaggccggagccgccgaagcccccgcc
gccccacagacgaactacattcaggtcacgccgcaggagaaggaagccatcgagaggtta
aaagccctgggctttcccgagggactcgtcatccaagcctacttcgcctgcgagaagaac
gagaacctcgccgcgaacttcctgctccagcagaactttgacgatgagtga
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