Megalobrama amblycephala (Wuchang bream): 125263552
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Entry
125263552 CDS
T08212
Symbol
rbck1
Name
(RefSeq) ranBP-type and C3HC4-type zinc finger-containing protein 1
KO
K10630
RanBP-type and C3HC4-type zinc finger-containing protein 1 [EC:
2.3.2.31
]
Organism
mamb
Megalobrama amblycephala (Wuchang bream)
Pathway
mamb04217
Necroptosis
mamb04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
mamb00001
]
09140 Cellular Processes
09143 Cell growth and death
04217 Necroptosis
125263552 (rbck1)
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
125263552 (rbck1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
mamb04121
]
125263552 (rbck1)
Enzymes [BR:
mamb01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.31 RBR-type E3 ubiquitin transferase
125263552 (rbck1)
Ubiquitin system [BR:
mamb04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
RBR proteins
125263552 (rbck1)
Multi subunit type E3
LUBAC complex
125263552 (rbck1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IBR
Zn_ribbon_RanBP
ubiquitin
zf-RING_2
zf-RING_5
zf-RING_UBOX
zf-C3HC4
IBR_1
zf-RING_11
Motif
Other DBs
NCBI-GeneID:
125263552
NCBI-ProteinID:
XP_048038535
LinkDB
All DBs
Position
LG2:complement(11617907..11628613)
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AA seq
508 aa
AA seq
DB search
MAALDASKYLTEAEDAAQLLSDAINSRDKDEATKHLDRLLDLKLPVCVKINPDAYSKDSI
RLRVGVADAVSDTHIPITVMVPVYMTVSELKEKINNDYGFHPALQRWVIGKRLARDKDTL
YHYGVRDHDDTAFLFILSAQAANLSREQERKEKEDRRIDVIIENIGGPPQRPPELRARGA
DLPHPPLPPKPQVGWSCPGCTFLNKPTRPGCEICSTARPETYIVPNVYQPDEAEIRRLQQ
EELASLQYEQSLIEERKKNFQELLETDSQSLVGNTDQLDCAICFCTIMPGEGAVLRECLH
SFCRDCLKETVLNCTDAEVACPYRDNAYSCNCKLQDREIKSLLSQDEYQKFLELRLNIAE
SRSENSYHCKTPDCAGWCIFEDDVNEFTCDICSETNCILCKAIHKGMNCQEYQDDLRIRA
QNDDAARQTTQMLDQLLKNGEAMNCPKCQVIVQKKDGCDWICCLMCKTEICWVTKQARWG
PKGAGDTSGGCRCRVNGVLCHPQCQNCH
NT seq
1527 nt
NT seq
+upstream
nt +downstream
nt
atggctgccctagatgcctccaaatatttaacagaagcggaggacgccgcacagctgctg
agtgacgccatcaactccagagacaaagatgaagcgactaaacacctggatcgacttctg
gacctgaaactccctgtgtgtgtcaaaataaatcccgatgcatactctaaagacagcatc
agattgagagtcggagtggcggacgccgtatcagatacccacatcccaatcacagtgatg
gttccagtctacatgacggtatcagagctgaaagaaaagatcaataatgactatggcttc
cacccggctctccagcgctgggtgatcggaaagcgcctcgcccgagacaaagacaccctg
tatcattatggagtcagagatcatgacgatacggccttcctcttcatcctttcagcccag
gctgccaatctgagccgtgaacaagagagaaaagaaaaagaggacagacggatcgacgtt
ataatagagaacattggcggcccacctcaacgaccaccagagctgcgcgccagaggggcc
gatcttcctcatcctcctctacctcctaaacctcaggttggatggtcatgtcccgggtgc
acattcctgaataaaccgacacgtccaggttgcgagatatgcagcacggcgagacctgaa
acctatatagtgccgaacgtgtaccagccggatgaggcggaaatcaggagactccagcag
gaggaacttgccagcctgcagtacgagcagtctctgatagaagaacggaagaagaatttc
caagaactcctggaaacagattcccagagtctggtggggaacacagatcaactggattgc
gccatctgcttttgcaccatcatgccaggagagggcgccgtgctgagagagtgcctgcat
agcttctgcagagactgcctgaaggaaactgttctgaactgcacggatgccgaggtggcg
tgtccctatagagacaacgcttattcctgtaactgcaaacttcaagatcgagaaatcaaa
tcacttctctctcaggacgagtaccagaagtttctcgaactgaggctgaacatcgcagag
tcgcgcagtgagaacagttaccactgcaagacgcccgactgcgccggctggtgcatcttc
gaagatgacgtgaacgaattcacgtgtgacatctgcagtgagaccaactgcatcctctgc
aaagctattcacaagggaatgaactgccaggagtaccaggacgacctccgtatacgagcc
cagaatgatgacgcagcccggcagaccacgcaaatgctggatcaactcctgaagaacggc
gaggcgatgaactgtcccaaatgtcaggtgatcgtccagaagaaagatggctgtgactgg
atctgttgtctgatgtgcaagaccgagatctgctgggtgactaaacaagcccgatgggga
ccaaagggtgctggagacacatcaggtggttgcagatgtcgagtcaacggagtcctatgc
catccgcagtgccagaactgccactga
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