Megalobrama amblycephala (Wuchang bream): 125263690
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Entry
125263690 CDS
T08212
Symbol
hnrnpa1a
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein A1a isoform X1
KO
K12741
heterogeneous nuclear ribonucleoprotein A1/A3
Organism
mamb
Megalobrama amblycephala (Wuchang bream)
Pathway
mamb03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
mamb00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
125263690 (hnrnpa1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mamb03019
]
125263690 (hnrnpa1a)
03041 Spliceosome [BR:
mamb03041
]
125263690 (hnrnpa1a)
Messenger RNA biogenesis [BR:
mamb03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
125263690 (hnrnpa1a)
mRNA cycle factors
Common to processing body (P body) and stress granule
125263690 (hnrnpa1a)
Spliceosome [BR:
mamb03041
]
Common components
Common spliceosomal components
hnRNP proteins
125263690 (hnrnpa1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_PARP14_3
Nup35_RRM_2
Motif
Other DBs
NCBI-GeneID:
125263690
NCBI-ProteinID:
XP_048038773
LinkDB
All DBs
Position
LG2:13002746..13016079
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AA seq
408 aa
AA seq
DB search
MSKEQQTPREPEQLRKLFIGGLSFETTDESLRAHFEQWGTLTDCVVMRDPNTKRSRGFGF
VTYSSVGEVDAAMDARPHKVDGRAVEPKRAVSREDSSKPGAHSTVKKIFVGGIKEDTDEE
HLREYFGQFGKIEEVNIMTEKNSDKRRGFAFITFDDHDSVDRIVIQKYHTVNGHNCEVRK
ALSREEMNRVSMNPRGGRGGGGGNFGRGGGYGGGGYGGGGGGGGRGGYGGGDGGYNGYGG
NGGYGGGGPNYGGNRGYGGGGGGGGGYGNQGGGYGGGGGGYDNYNNGGGGNFGGGNFGGG
GGGDYNDFGNYNQSSSNYGPMKGGNYGGGGRSGGGGPYGGGYGGGSSGGYGGSSGGRTVL
DSRATVLRGEPERDDRERREASRFTPRSAQPSSVVAILTSATRRERVQ
NT seq
1227 nt
NT seq
+upstream
nt +downstream
nt
atgtccaaagagcaacagaccccccgtgagcctgagcagctccgaaagctctttatcggg
ggtctcagtttcgagacaacagatgagagtctaagggcccatttcgagcaatggggaact
cttacagactgtgtggtgatgagggaccccaacacaaagaggtcgaggggttttgggttt
gtgacctacagttcggttggtgaggtggatgctgcgatggacgctcgtccgcacaaagtg
gacggaagagcagttgaacccaagagggcggtttctagagaagactcgtccaaaccaggc
gctcactccactgttaaaaagatttttgtgggcggaatcaaagaagacacggatgaggaa
cacttgcgtgaatatttcggccagtttggtaaaattgaagaggtcaacatcatgacagag
aagaacagtgataagaggaggggctttgccttcataacatttgatgaccatgactctgtt
gacaggattgtcattcagaagtaccatacggtgaatggacacaactgtgaagtcaggaaa
gctctctccagagaggaaatgaacagagtctcaatgaatccacgaggtgggcgagggggt
ggtggcggaaactttggcagaggaggtggatatggaggaggtggatatggaggaggaggc
ggcggcggaggaagaggaggttacggtggaggtgatggtggatataatggctatggaggg
aatggaggctatggtggaggcggacctaattatggtggtaaccgtggttatggaggtggc
ggcggcggtggtggcggctatggaaaccagggtggaggctatggtggcggcggtggcggc
tatgataactacaacaacggtggtggaggcaactttggaggaggcaactttggaggtgga
ggtggcggagactacaatgattttggcaactacaaccagtcttcctctaactacggccca
atgaagggaggaaactatggaggtggtggaaggagcggcggcggtggcccatatggtggt
ggttatggaggaggctccagtggtggttatggaggcagctctggtgggcgaacggtttta
gactccagggccacagtacttagaggagagccagagagagatgacagggaaaggagagaa
gcaagcaggtttacacctagatctgcccagccaagcagcgtggtggcgattttaacgtct
gccacgcgaagagaacgtgttcaatag
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