Megalobrama amblycephala (Wuchang bream): 125264213
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Entry
125264213 CDS
T08212
Symbol
tnpo2a
Name
(RefSeq) transportin-2 isoform X1
KO
K18727
transportin-2
Organism
mamb
Megalobrama amblycephala (Wuchang bream)
Pathway
mamb03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
mamb00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
125264213 (tnpo2a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mamb03019
]
125264213 (tnpo2a)
Messenger RNA biogenesis [BR:
mamb03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
125264213 (tnpo2a)
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
HEAT_EZ
HEAT
HEAT_GCN1
TPR_IMB1
HEAT_2
TOR1L1_N
IBN_N
HEAT_EF3_N
Vac14_Fab1_bd
TPR_IPO5
Cnd1
Arm
HEAT_MROH2B_C
TPR_DNAAF5
PDS5
MMS19_C
Adaptin_N
HEAT_GCN1_C
Ltn1_1st
Dopey_N
INTS7_N
RTP1_C1
PIK3R4-like_middle
UNC45-central
CandA_N
DUF2573
RELCH_C
Motif
Other DBs
NCBI-GeneID:
125264213
NCBI-ProteinID:
XP_048039375
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Position
LG1:15654615..15674074
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AA seq
889 aa
AA seq
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MEWQPDEQGLQQVLQLLRDSQSPNTATQRAVQQKLEQLNQFPDFNNYLIFVLTRLKTEDE
PTRSLSGLILKNNVKVHYQNFPPEVAHFIKQECLNNIGDPSPLIRATIGILITTISTKGE
LQTWPELLPQLCNMLNSEDYNICEGSFGALQKICEDSSELLDSDALNRPLNIMIPKFLQF
FKHCSPKIRSHAIACVNQFIIGRAQALMDNIDTFIESLFALAADEDSEVRKNVCRALVML
LEVRVDRLIPHMRSIVEYMLQRTQDPDENVALEACEFWLTLAEQPICKEVLSGHLAQLVP
VLVNGMKYSEIDIILLKGDVEEDEAVPDNEQDIKPRFHKSRTVTLRHEGDEGEEGEDSED
DDDDDDDSLSDWNLRKCSAAALDVLANVFRDELLPHLLPVLKELLFHPDWVVKESGILVL
GAIAEGCMQDMVLYLPELIPHLIQCLCDKKALVRSIACWTLSRYAHWVVSQPPDSYLKPL
MTELLKRILDSNKRVQEAACSAFATLEEEACTELVPYLSFILDTLVFAFGKYQHKNLLIL
YDAIGTLADSVGHHLNQPEYIQKLMPPLIQKWNELKDEDKDLFPLLECLSSVATALQSGF
LPYCEPVYQRCVTLVQKNLAQAMMYNQQPDQYEAPDKDFMIVALDLLSGLAEGLGTHVEQ
LVTRSNIMTLLFQCMQDTMPEVRQSSFALLGDLTKACFLHVKPCIAEFMPVLGVNLNPEF
ISVCNNATWAIGEIAIQMGTEMQPFVALVLNNLVEIINRPNTPKTLLENTAITIGRLGYV
CPQEVAPMLPQFIRPWCTSLRNIRDNEEKDSAFRGICIMIGVNPGGVVQDFIFFCDAVAS
WVNPKDDLRDMFYKILHGFKDQVGEDNWQQFSEQFPPQLKERLSACYGV
NT seq
2670 nt
NT seq
+upstream
nt +downstream
nt
atggagtggcagccggatgaacaaggcctccagcaggtcctgcagctcctgagagactcc
cagtctccaaacacagccacacagagagctgtgcagcagaaactagagcagctgaatcag
tttcctgattttaacaactatctcatcttcgtcctgacgaggctgaaaactgaagatgag
cccactcgatctctcagcggtctgatactgaagaacaatgtgaaggttcactatcagaac
ttccctcctgaagtcgcgcacttcatcaagcaggaatgtttaaacaacatcggagaccct
tcccctctcatccgcgccactatcggtatcctaattacaacgatttccaccaaaggggag
ctgcagacatggccagagttgctgccccagctgtgcaacatgctcaactcggaggactac
aacatctgtgagggctcgtttggagctctacagaagatctgtgaggactcgtctgagctc
ctggacagtgacgctctgaaccgacccctcaacatcatgattcccaagttcctccagttc
ttcaaacactgcagccctaaaatcaggtctcatgctattgcctgtgtgaaccagtttatc
atcggaagagcgcaagccctgatggacaacattgacacctttattgagagtctgtttgcg
ctggccgcagacgaggactcggaggtgcggaagaacgtgtgcagggctctcgtcatgctg
ctggaggtgcgagttgaccgactcatccctcacatgcgcagcatcgttgagtacatgctg
cagcgcacacaggacccggatgagaacgtggctctggaggcctgtgagttctggcttacg
ctggctgagcagcccatctgtaaggaagtcctgtctggacaccttgcacaactcgttcct
gttctggtgaacgggatgaagtactctgagattgacatcattttgttaaagggtgatgtg
gaggaagacgaagccgtgccggacaacgagcaagacataaagcctcgctttcacaagtct
cgtacggtcacccttcggcacgaaggtgatgaaggggaggaaggagaggacagtgaggat
gatgacgacgatgacgacgacagtctctccgactggaatctacgcaagtgttcggcagca
gcccttgatgtcctggcaaatgtgtttcgggatgagttgctgccccacctgctccctgtg
ctgaaggaactgctgttccacccggattgggttgttaaagagtctggcatcctggtgctt
ggagccatcgctgaaggctgtatgcaggatatggtactgtacctgcctgagttaattcct
cacctgatccagtgtctctgtgataagaaggcactggtccgctccatcgcctgctggact
ctgagtcgctatgcacactgggtggtcagccagccgcctgactcctacctcaaacccctc
atgaccgagctgctcaaacgcatcctcgacagcaacaagagggttcaagaggctgcctgc
agtgcatttgcgaccctggaagaggaggcctgtacagagctggttccctacttgagcttc
attctggacacactggtgtttgccttcgggaagtaccagcataagaacttgttgatcctc
tatgatgccatcgggacccttgctgactctgtcggacatcatcttaaccagccggaatac
atccaaaagctcatgccccctctgattcagaaatggaatgagttaaaagatgaagacaag
gatctgttccccttgttggagtgtctgtcttcagtggccacagcactgcagagtggcttc
ctgccttactgtgaaccagtttaccagcgctgtgtcaccctggtccagaagaacctcgct
caagccatgatgtataaccagcagcctgaccagtatgaggcccctgataaagacttcatg
attgtggcccttgatctgctcagcggtctggccgaggggctcggaactcatgtagagcag
ctggtcacccgcagcaacatcatgaccctgctcttccagtgcatgcaggacaccatgcca
gaagtgcgacagagttcgttcgctctgctaggagacttgacgaaggcgtgtttccttcat
gtgaagccctgcattgctgagttcatgcctgttttgggtgtcaatctcaaccctgaattc
atatctgtgtgcaacaatgccacatgggccatcggagagattgctattcagatgggtacg
gagatgcagccttttgtggccttggtcctcaataaccttgtggagatcatcaacagacct
aatacacccaaaactcttctggagaacacagccattacgattggtcgactgggatatgtg
tgtccacaggaagttgcccccatgttgccacagttcattcgcccttggtgcacatcactt
agaaacattcgtgacaatgaagaaaaagactcggccttcagaggcatttgcataatgatt
ggggtaaatccaggaggagtcgtacaggacttcatctttttctgtgacgctgtggcctcc
tgggtaaatccaaaagacgatttgagggacatgttctacaagattttgcacggcttcaag
gatcaggttggcgaggataactggcagcagttctcagaacagtttcccccgcagctgaaa
gagagactttcagcctgctatggcgtgtag
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