Megalobrama amblycephala (Wuchang bream): 125264400
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Entry
125264400 CDS
T08212
Symbol
mex3b
Name
(RefSeq) RNA-binding protein MEX3B
KO
K15686
RNA-binding protein MEX3 [EC:
2.3.2.27
]
Organism
mamb
Megalobrama amblycephala (Wuchang bream)
Brite
KEGG Orthology (KO) [BR:
mamb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mamb03019
]
125264400 (mex3b)
04121 Ubiquitin system [BR:
mamb04121
]
125264400 (mex3b)
Enzymes [BR:
mamb01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
125264400 (mex3b)
Messenger RNA biogenesis [BR:
mamb03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
125264400 (mex3b)
Ubiquitin system [BR:
mamb04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
125264400 (mex3b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
KH_1
KH_Vigilin
zf-C3HC4_3
KH-I_KHDC4-BBP
zf-RING_2
zf-C3HC4
RING_XB3-XBAT31
KH_2
zf-C3HC4_2
KH_DEAH11_2nd
Prok-RING_4
zf-RING_UBOX
zf-RING_5
Motif
Other DBs
NCBI-GeneID:
125264400
NCBI-ProteinID:
XP_048039626
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All DBs
Position
LG3:complement(7387772..7391610)
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AA seq
529 aa
AA seq
DB search
MPSSLFADMERSGSGGQGDALDDQRALQIALDQLSLLGLDNDENPLYDNEPRKKSVNMTE
CVPVPSSEHVAEIVGRQGCKIKALRAKTNTYIKTPVRGEEPVFVVTGRREDVAMARREII
SAAEHFSMIRASRNKNSSLNGNATVPGPPNLPGQTTIQVRVPYRVVGLVVGPKGATIKRI
QQQTHTYIVTPSRDKEPVFEVTGMPENVDRAREEIEAHIAMRTGGLIEFTDENDFHANGT
DVGFDLHGNASLWSKPSSSVTPTSGRKPFSNYRNDSSSSLGSASTDSYFGGGGGGGGGGN
NSSSRLADYSPPSPALSYTASSNGNNNNNNINMNANGNGFVYGGEVISPDCTELSFESSP
GFDPTPAPPGLMWSQYERATNGTSPPFPTNASTNANGLRRANNGSQPRLSPPLHQANGVA
EHPLARRVRSDPGGGTLSFPGYSPALPGSHHPDSSISSSSSSSSSSSSGTSRKGSRDCSV
CFESEVIAALVPCGHNLFCMECANRICERNEPKCPVCHAAVTQAIRIFS
NT seq
1590 nt
NT seq
+upstream
nt +downstream
nt
atgcctagttcgctgttcgccgacatggagcggagcggcagcggcgggcagggggacgcc
ctggatgaccaaagagccctacagatcgcgctggaccagctctccctgctcggactggat
aacgatgaaaatcctctgtatgacaacgagcccaggaaaaagagcgtgaacatgaccgaa
tgcgtccccgttcccagttccgagcatgttgccgaaattgtcggcaggcaaggttgcaaa
attaaagccctgcgagcaaagaccaatacgtatatcaaaactccggtgcggggagaggag
ccggtctttgttgtgacaggcaggcgagaggatgtagccatggcgcggagggagatcatc
tcggcggccgagcacttctcgatgatccgagcctcgcggaacaaaaacagcagcctgaac
ggtaacgccacagtgcccggcccgcccaacctacccggccagaccaccattcaggtgcgg
gtgccctatcgggtggtgggtctggtggtcggacccaagggggccactatcaagcgcatc
cagcagcagacccacacctacatcgtcacgcccagccgggacaaagagcccgtgttcgag
gtgacgggcatgcctgagaacgtggaccgggccagggaggagatcgaagcacacatcgcc
atgcgcaccggcggcctcatcgagttcaccgacgagaacgacttccacgccaacggcacc
gacgtgggattcgacctgcacgggaacgccagcctgtggagcaagcccagctccagcgtc
acgcccacctccggtcgcaagcctttctccaactaccgcaacgacagctccagctctctg
gggagtgcctctaccgactcgtactttggcggcggcggcggcggaggaggaggcggcaac
aacagcagctcccggctggccgattacagcccgcccagccccgccctcagctacactgcc
tccagcaacggcaacaacaacaacaacaacatcaacatgaacgccaacggcaatggattt
gtctacggcggcgaggtgatctcgcccgattgcaccgagctgagcttcgagtcgtcgccg
ggattcgaccccactccggcgccgccgggcctgatgtggtcgcagtacgagcgcgccacc
aacggcacctccccgccttttcccaccaatgcttccacgaatgccaacgggctgcgccgg
gccaacaacggcagccagcccaggttgtccccgcccctgcaccaagccaacggcgtggcg
gagcacccgctggcgcgccgggtgcgcagcgacccgggcggcggcaccctcagcttcccc
ggctactccccggcgcttccgggatcccatcaccccgactcctccatctcctcgtcctcc
tcgtcgtcctcgtcctcctcgtccgggacgagccgcaagggcagtcgggactgctccgtg
tgcttcgagagcgaggtgatcgcggccctggtgccctgcggccacaacctgttctgcatg
gagtgcgccaaccgcatctgcgagaggaacgagcccaaatgccccgtctgccatgctgca
gttactcaggctatacgtatattttcctaa
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