Megalobrama amblycephala (Wuchang bream): 125264935
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Entry
125264935 CDS
T08212
Symbol
smarcd3b
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 3b isoform X1
KO
K11650
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D
Organism
mamb
Megalobrama amblycephala (Wuchang bream)
Pathway
mamb03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
mamb00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
125264935 (smarcd3b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mamb03021
]
125264935 (smarcd3b)
03036 Chromosome and associated proteins [BR:
mamb03036
]
125264935 (smarcd3b)
Transcription machinery [BR:
mamb03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
125264935 (smarcd3b)
Chromosome and associated proteins [BR:
mamb03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
125264935 (smarcd3b)
PBAF complex
125264935 (smarcd3b)
GBAF(ncBAF) complex
125264935 (smarcd3b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIB
Motif
Other DBs
NCBI-GeneID:
125264935
NCBI-ProteinID:
XP_048040688
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All DBs
Position
LG3:26873762..26922523
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AA seq
516 aa
AA seq
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MHNAEVTKSGGAVSTLLNVSVCAQRDFQSLCASDRPGMPSGARMPHQGAPMGPPGPPYGG
NTAVRPGLTNQNMEASRKRPAPSQQQMQQQQQAVQNRNRKKPVGFPGPNEMPGRQMDMRE
AQSDPTLGSNAKRRKMADKILPQRIRELVPESQAYMDLLAFERKLDQTIMRKRVDIQEAL
KRPMKQKRKLRLYISNTFNPAKPDAEDSEGSIASWELRVEGKLLDDPGKMKRKFSSFFKS
LVIELDKDLYGPDNHLVEWHRTPTTQETDGFQVKRPGDVNVRCTLLLMLDYQPPQFKLDP
RLARLLGIHTQTRSSIIQALWQYVKTNKLQDSHDKEYINCDKYFQQIFDCPRLKFSEIPQ
RLTNLLLPPDPIVINHIISVDPNDQKKTACYDIDVEVEDPLKAQMSSFLLSTANQQEIAS
LDSKIHETIESINQLKIQRDFMLSFSRDPKGYIQDWLKSQSRDLKLMTDVVGNPEEERRA
EFYHQPWSQEAVSRYFYCKIQQRRQELEQALAMRNT
NT seq
1551 nt
NT seq
+upstream
nt +downstream
nt
atgcacaacgcggaggtgactaaaagtggcggggcagtttctacactcctgaatgtttct
gtctgtgcgcagcgcgatttccaatctctgtgtgcgagtgatcggcctggcatgccatca
ggagcacgaatgcctcatcagggggccccgatggggcctccaggaccaccgtatggaggg
aacaccgctgtccggcctggacttacgaatcagaacatggaggccagtcgtaaacgtccc
gctccttcacagcagcagatgcaacagcagcagcaggcagtacagaatcgaaacaggaag
aagcctgtgggatttcctggaccaaatgagatgccagggaggcagatggacatgagagag
gcccaatcagatcccacactcggatcaaatgccaagaggaggaagatggctgataagatc
cttccacaaaggattcgtgagcttgttccagagtcacaggcgtatatggatctgttggca
ttcgagcgcaaattagaccagaccataatgcgcaaacgggtggacatccaagaggcactt
aagagacccatgaagcaaaagcgaaaactgcgtctctacatctccaacacgtttaaccct
gccaagcctgatgcagaggactccgaaggcagcattgcatcctgggagctgcgtgtggag
ggcaaactgctggatgatccaggcaagatgaagaggaagttctcctctttcttcaagagt
ctggtgattgagcttgacaaagacctttacggccctgataaccatttggttgagtggcat
cgtaccccaaccactcaggagacagacggtttccaggtgaagaggcctggagatgttaac
gtgcgctgcaccctgctgttaatgctggattaccagccacctcagtttaagctggatcca
cgtctggctcgtctgctcggcatacacacacagactcgctccagtatcattcaggccctc
tggcagtatgtcaaaaccaacaaactgcaggactcgcatgacaaggagtacatcaactgt
gacaagtacttccaacagatcttcgactgtccacgcctgaagttctctgaaatcccacag
cgcctcaccaaccttctactgcctcccgaccctatcgtcatcaaccacatcattagtgtc
gaccctaatgatcagaaaaagacggcctgctatgacattgatgtagaggtggaagatccc
cttaaagcacaaatgagcagcttcctgctctccacagctaatcagcaagagatcgcctct
ttggacagcaagatccatgagactattgagtccatcaatcagctgaagattcagagagat
ttcatgctcagcttctccagagatcccaaaggctacattcaggactggctcaaatcccag
agcagagatctgaagctgatgacagatgttgttgggaacccagaggaagagaggagagca
gagttttatcatcagccttggtctcaggaggctgtcagccgttacttctactgcaagatt
cagcagaggaggcaggagctggagcaggccttggccatgaggaacacctag
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