Megalobrama amblycephala (Wuchang bream): 125264959
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Entry
125264959 CDS
T08212
Symbol
shha
Name
(RefSeq) sonic hedgehog protein A isoform X1
KO
K11988
sonic hedgehog
Organism
mamb
Megalobrama amblycephala (Wuchang bream)
Pathway
mamb04340
Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:
mamb00001
]
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
125264959 (shha)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
mamb01002
]
125264959 (shha)
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
mamb00536
]
125264959 (shha)
Peptidases and inhibitors [BR:
mamb01002
]
Cysteine peptidases
Family C46: hedgehog family
125264959 (shha)
Glycosaminoglycan binding proteins [BR:
mamb00536
]
Heparan sulfate / Heparin
Morphogens
125264959 (shha)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HH_signal
Hint
Peptidase_M15_3
DHQS
DUF7764
Vint
Ribosomal_S6e
Motif
Other DBs
NCBI-GeneID:
125264959
NCBI-ProteinID:
XP_048040741
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All DBs
Position
LG3:complement(27480507..27510343)
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AA seq
418 aa
AA seq
DB search
MRLMTRVLLVSLLSLSLVVSGLACGPGRGYGTRRHRKKLTPLAYKQFIPNVAEKTLGASG
RYEGKITRNSERFKELIPNYNPDIIFKDEENTGADRLMTQRCKDKLNSLAISVMNQWPGV
KLRVTEGWDEDGHHFEESLHYEGRAVDITTSDRDKSKYGTLSRLAVEAGFDWVYYESKAH
IHCSVKAENSVAAKSGGCFPGSALVTLKDGGQKAVKDLNPGDKVLAADSAGNLVYSDFIM
FTDRDSATRRIFYVIETKEPVEKITLTAAHLLFVLDNSTDDLHTMTAAFASSVRAGQKVM
VVDDSGQLKSVIVERIYTEEHQGSFAPVTAHGTIVVDRILASCYAVIEDHGLAHLAFAPV
RLYYDVSSVLFPKNFISQSSATLQQEGVHWYSKLLYQMGTWVLDSHMLHPLGMSVNSS
NT seq
1257 nt
NT seq
+upstream
nt +downstream
nt
atgcggcttatgacgagagtgctgctggtgtctcttctcagtctgtccttggtggtgtcc
ggactggcctgcggtccaggcagaggctacggcacaagaagacatcggaagaagctgaca
cctctcgcctacaagcagttcatacctaatgtcgcggagaagaccttaggggccagcggt
agatacgagggcaagataacgcgcaattcggagagatttaaagaacttattccaaattac
aatcccgacattatctttaaggatgaggagaacacaggcgcggacagactcatgacacag
agatgcaaagacaagctgaactcattggccatctctgtaatgaaccagtggccgggggtt
aagttgcgtgtgacagagggctgggatgaggacggtcaccattttgaagaatcactccac
tacgagggaagagctgttgatatcaccacctctgatcgagacaagagtaaatatgggaca
ctctctcggttagctgtagaagctggatttgactgggtctattatgagtccaaagcccac
atccattgctctgtcaaagcagaaaattcggttgctgcaaaatctggagggtgtttccca
ggttcggctctggtcacgctcaaagacggagggcagaaggccgtgaaggacctgaacccc
ggcgacaaggtgctggcggcggacagcgctgggaacctcgtgtacagcgacttcatcatg
ttcacagaccgagactccgcgacgcgacgtatcttttacgtcatagaaacgaaagaaccc
gttgaaaagatcaccctcaccgctgctcatctcctttttgtcctcgacaactcaacggat
gatctccacaccatgaccgccgcgtttgccagcagtgtcagggccggacaaaaggtgatg
gttgttgatgatagcggtcaacttaaatctgtcatcgtggaacggatatacacggaggag
caccagggctcgttcgcaccagtgactgctcatggaaccattgtggtcgacagaatactg
gcgtcctgttacgccgtaatagaggaccacggtctcgcgcatttggccttcgcgcccgtc
aggctctattatgacgtgtcatcagtcctgttccccaaaaacttcatcagtcagtccagt
gcgactttacaacaggagggagtccactggtactccaagctcctctatcaaatgggaacg
tgggttttggacagccacatgcttcatcctttggggatgtcagtaaactcaagctga
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