Megalobrama amblycephala (Wuchang bream): 125264976
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Entry
125264976 CDS
T08212
Symbol
sorcs2
Name
(RefSeq) VPS10 domain-containing receptor SorCS2 isoform X1
KO
K27082
VPS10 domain-containing receptor SorCS2
Organism
mamb
Megalobrama amblycephala (Wuchang bream)
Brite
KEGG Orthology (KO) [BR:
mamb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mamb04131
]
125264976 (sorcs2)
Membrane trafficking [BR:
mamb04131
]
Protein recycling
Others
Others
125264976 (sorcs2)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Sortilin-Vps10
Sortilin_C
PKD
PKD_4
InlK_D3
BNR_6
DUF6786
Motif
Other DBs
NCBI-GeneID:
125264976
NCBI-ProteinID:
XP_048040776
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All DBs
Position
LG3:complement(28079741..28292272)
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AA seq
1161 aa
AA seq
DB search
MKTLIMAVFAHLYPAVFFACAFMSLFGPISCHSGVIHQRNERDRELDSRGGHVIGRDETL
ISAHSRGDYSGDPGGPAMGVPRVRRASTPEKVSLLSSSFVLKGDATHNQAMVHWTGENSS
VILILTKYYHADSNKVLESSLWRSSDYGSTYTKLNLMPGTTIIVTNFYICPTNKKKVILV
SSSINERDQMLFISTDEGASFQRQPVSFTVETLLFHPSEEDKLLAYSKEAKLYISTDLGH
KWTLLQERVTKDRVFWAVMGVDVDPDLVHMEIQDISGGYLYVTCLIQNCSDKMVTAQFLG
KIDHNSLSVQDEYIFVKVTTGNRTKYYVSYRRNEFVQMRFPKYALPKNVRIVSTDENQVF
LALQEWYQTDTYNLYQSDPQGVYYSIVLENVRSTKQPEENVLIDILEVRGIKGVFLANQK
VDGKVMTLITYNKGRDWEPLAPPTTDMNGKPVSCKQPDCHLHLHLRWADSPYVSGTVHTK
DSAPGLIMGAGNLGSQLVEYKEEMYITSDCGKTWRQVFEEEHHILYLDHGGVIVAIKDTS
IPLKILKFSIDEGQTWSIHNFTSTSVFVDGLLSEPGDETLVMTVFGHISYRSDWELVKVD
FRQSFPRQCTEADYDSWKLTDLQGEKCIMGQERMYRKRKEASLCIKGKSYTSALTAKPCQ
CSEKDFACDYGFERAPSLRLEGDRCYPDFWHDPDAPPENCHLGHSYKSSTGYRKVIANVC
EGGLNKEQSAKQHSCPLLPPKGLQLGIKGQMLAVAPGDDITFIVHQEQGDTTNTRYQVDL
MDGVRAIYENLTVTDEPIQHRYEKPGVYRVNVKAENSAGHDQATLYIQVTAPLQDVHLEV
VPIAGRNQEVNLTAIVLPIEANLTVFYWWIGDNLQPKLTLENSLITRFSEEGEVPVTVQA
SNGRSMVQDSKTVIVYDHFQVIPLSFSRNLDSFNPNIPEWRQDVGQVVTKILAKLTGVPQ
DSLVTMVKPGLPTTADLYVLPPVSTPVKRSVFVDKRIPTIKQVLSENNVSFIVRGGLQVL
VTLADSDAGSRLGAGGPGVWALAVFLLISLISAAAFILFKFKRKNYKNHGSLLRPEESSL
TRPWLRFRKLPGRNVYAQMHNEKEQEMTSPVNHSEDTQNIIQGEEFIDDDLDSQTLGNAG
GNHSGVVLSINSRELHSYLTS
NT seq
3486 nt
NT seq
+upstream
nt +downstream
nt
atgaagacgctcatcatggcagtttttgcgcacctgtacccagctgtatttttcgcttgc
gcgtttatgtcacttttcggaccgatttcatgtcacagcggcgttatacaccagagaaac
gaacgggaccgagagcttgacagccgcggtgggcatgtcattggcagagatgaaacgctt
atctcagcgcacagccgcggagattacagcggggacccgggcggaccggccatgggagtt
ccccgagtccggagggcatcgactccggagaaagtctctctactcagcagctctttcgtc
cttaaaggggatgccacccacaaccaggcaatggtccactggacgggtgaaaacagcagc
gtcatcctcattctcactaaatattaccatgcagactccaacaaagttcttgagagttcc
ctttggagatccagtgattatgggtcaacctacaccaagcttaatctgatgcctgggaca
accatcatagtcacaaacttctacatttgtcccaccaataagaaaaaggtcatcttagta
agctccagcatcaatgaacgtgaccagatgctcttcatcagcacagatgagggtgcatcc
tttcaacggcagcctgtctcctttaccgtggaaacactcctcttccatccatctgaggaa
gacaaactgttggcttacagcaaggaggcgaagctgtatatctccacggatctgggtcac
aaatggactctgctacaggagcgtgttactaaagacagagttttctgggctgtgatgggg
gtggatgtggatcctgatttggttcatatggagattcaagacatcagcggtggatacctt
tatgtgacatgtctcatccaaaactgctctgataaaatggtgacagcacagttcttgggg
aagattgaccacaattccctctcagtgcaagatgaatacatatttgtaaaggtaactaca
ggaaatcgcaccaagtattatgtctcataccggaggaatgaatttgttcaaatgagattc
cctaaatacgcccttccaaagaatgtgcgaattgtgagtacagacgagaatcaggtattc
ctggctcttcaagagtggtatcagacggacacgtacaacctctaccagtcagatccgcag
ggagtctattactccattgtgttggagaacgtccgcagcaccaagcagcctgaagagaat
gtcctcatcgacatcctggaggttcgtggcatcaagggcgtattcttagccaatcaaaaa
gtagatggaaaagtgatgactctcatcacctacaacaaaggcagggactgggaaccattg
gctcctcctacaactgatatgaacggcaaacctgtcagttgcaagcagcctgactgtcac
ctccatctccacttgcgatgggctgacagcccgtacgtatctggaaccgtccacactaaa
gattctgccccaggcctcataatgggtgcaggtaaccttgggtctcagttggttgaatat
aaagaggagatgtacatcacctcagactgtggcaagacctggagacaggtttttgaagaa
gagcatcatattctctatctggatcatggcggtgtcattgtggccattaaggacacttct
atccctttaaaaatactcaaattcagcatagatgaaggacaaacgtggagcatccacaac
ttcaccagcacttctgtgtttgtggatggacttctgagcgaacctggagatgagacactg
gttatgacggtatttggccacataagttaccgttcggattgggagctggtgaaggtggat
ttccgtcagtcgtttcccagacagtgcacagaagctgattatgactcatggaaactcact
gatctacagggagagaaatgcatcatgggccaggaacgaatgtacaggaagaggaaagag
gcatcgttgtgcattaaagggaagagctatacatcagctctaacggctaaaccttgccag
tgctcagagaaagactttgcctgtgactacggctttgagagagctcccagcctcaggtta
gagggtgatcgctgctatcccgacttctggcatgatcctgacgctccacctgaaaactgc
catttaggacacagctataagtccagcacaggttaccggaaggtcatcgctaatgtttgt
gagggtggcttgaataaagaacagagcgcaaagcagcattcctgtcctttgctgccccct
aaaggcctgcagctgggcatcaaaggacagatgttggccgtggcacctggtgatgacatc
acctttatagtgcatcaggaacagggtgacaccaccaacaccagatatcaggtcgattta
atggatggggtcagggctatatatgaaaacctgactgtcacagacgaacccattcagcac
cgttatgagaaaccaggtgtttaccgtgtgaatgtgaaggctgaaaattctgctggacac
gaccaagccaccctttacattcaggtcacagctcctctacaggatgtccacctggaggtg
gtcccaatcgctggcagaaatcaagaagtaaatctcacagctatagtgctgcccattgag
gcaaaccttaccgtgttttactggtggattggagataaccttcagccaaagctgaccctg
gagaacagcctgattacaaggttctctgaggagggcgaagttcctgtgacagttcaggct
tctaatggtcgctccatggtgcaggacagcaagactgtcattgtttatgatcatttccag
gtcatcccattgagtttcagtcgtaatttggacagctttaacccaaacatccctgaatgg
agacaagatgtgggacaagtcgtaaccaagattctcgctaagctcacaggggttcctcag
gactctttggttaccatggtgaagcctggtcttcccaccactgcagacctgtatgttctt
cctccagtcagcacaccagtgaagaggagtgtgtttgtggataagcgtattcccaccata
aagcaggttctgagtgagaacaatgtgagcttcattgtgagaggagggttacaagtgttg
gtgactcttgcagactcagatgcaggttctcgtttgggtgcaggaggtccaggtgtttgg
gctctcgctgtctttctcctcataagcctgatctctgctgcagcattcatactcttcaag
tttaaaaggaaaaactacaaaaaccatggttccttgctgaggccagaggagagcagccta
acgcgtccctggctgcgtttcagaaaactgccagggcgaaacgtctacgcccagatgcac
aatgagaaggagcaggaaatgaccagccctgtcaatcacagtgaggacacgcagaatatc
attcaaggcgaggagttcattgatgacgaccttgactcgcagacactaggtaacgctgga
ggcaaccactcaggggtggtgttgagcataaattcaagggagcttcacagttacctgacc
agctga
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