Megalobrama amblycephala (Wuchang bream): 125265014
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Entry
125265014 CDS
T08212
Symbol
atg13
Name
(RefSeq) autophagy-related protein 13 isoform X1
KO
K08331
autophagy-related protein 13
Organism
mamb
Megalobrama amblycephala (Wuchang bream)
Pathway
mamb04136
Autophagy - other
mamb04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
mamb00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
125265014 (atg13)
04136 Autophagy - other
125265014 (atg13)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mamb04131
]
125265014 (atg13)
03029 Mitochondrial biogenesis [BR:
mamb03029
]
125265014 (atg13)
Membrane trafficking [BR:
mamb04131
]
Autophagy
Autophagosome formation proteins
ULK complex
125265014 (atg13)
Atg1 complex
125265014 (atg13)
Mitochondrial biogenesis [BR:
mamb03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
125265014 (atg13)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATG13
Motif
Other DBs
NCBI-GeneID:
125265014
NCBI-ProteinID:
XP_048040878
LinkDB
All DBs
Position
LG3:29032600..29045547
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AA seq
536 aa
AA seq
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MDSDLSLQDKKDLDKFIKFFALKTVQVIVQARLGEKISTCSSSSPTGSDWFNLAIKDIPE
VTHEAKKALAGQLPGIGRSMCVEISLKTSEGDSMELETWCLEMNEKCDKDIKVSYTVYNR
LSLLLKSLLAITRVTPAYKLSRKQGHDYVILYRIYFGDVQLTGLGEGFQSVRVGVVGTPI
GTITLSCAYRTNLALMSSRQFERTGPIMGIIIDHFVERPFTNMAHMHPCSYRAPGEDEGG
TYAGIEDSQEVCTTSFSTSPPSQCVCTVSKAHFKTPKPALMATLKVPLVGLGISQQLYSS
RLSYQTPALGTVDLCHPSACTAAAHPHQMVVPGKEGGVPQVPAQPNHGTAAEHGRIPSCP
TGQSPQLAPPTSCSSEVKTVSPSDALETTFTRKVGAFVNKATTQVTTNSLDLPFAAFAPR
VYDLEENDPMVHPPPSPAPSSPLQGSLHSNSSSHSGGQPHDDFVMVDFKPAFSKDDLLPM
DLGTFYREFQNPPQLASLSIDVSAQSMAEDLDSLPEKLAIYEKNIDEFDAFVDTLQ
NT seq
1611 nt
NT seq
+upstream
nt +downstream
nt
atggatagtgatctgagcctacaggacaagaaagacttggataaattcatcaaattcttt
gccttgaagacggtgcaggttatagttcaagcccgacttggagagaagatcagcacttgc
tcatcttcatcaccgacaggttcggactggtttaatctggcaataaaagacatccctgag
gtgactcatgaggcaaaaaaagctcttgctggacagctgcctggcatcggccgatccatg
tgtgtggagatctccctcaaaacctcagagggagactccatggagctggagacatggtgt
ttggaaatgaatgaaaaatgtgataaggacattaaagtgtcctatacagtttataatcgg
ctatctctgctgctcaagtctttactggccatcacaagggtgacacctgcttacaagctt
tcacgtaaacaaggccatgattatgtcatactctacaggatctattttggagatgtccag
ctgacaggtctcggggaagggttccagtcagtgcgagtgggtgttgtagggactcccata
ggcaccatcactttgtcatgtgcatatcgcactaatttggccctcatgtcatcaaggcag
tttgagaggacaggccccatcatgggtatcatcattgatcattttgtggagcgtcccttc
acaaatatggcacacatgcatccttgcagttacagagcacctggagaagatgagggaggg
acttatgcaggaatagaagactctcaggaggtgtgcaccacatccttttccacctcccca
ccatcacagtgtgtgtgtactgtaagtaaggcacattttaagacacctaagccggctctg
atggccacactgaaggttcccctcgtggggcttggcatctcacagcaactgtacagctct
cgtctgtcatatcagactcctgctctgggaactgtggatttgtgccatccttcggcttgt
actgctgctgcacatcctcaccagatggtcgtgccgggtaaagaaggtggagtcccgcag
gtgccggctcaacctaatcatggcactgcagctgagcatggtcgtatcccatcatgcccc
actggacagtcccctcagctggcaccacccacatcctgtagcagcgaggtgaagactgtg
tccccctctgatgctttagagacaacctttaccaggaaagttggagctttcgtcaacaaa
gccaccactcaggtgacgacaaacagtctagatcttccttttgctgcgttcgctccaaga
gtctatgacctggaggagaacgacccaatggtgcaccctcctccatctccggccccttca
tctcctttgcaaggcagcctgcactcaaacagctcgagccacagcgggggacagccacat
gacgactttgtcatggttgactttaaaccagcgttctctaaggatgaccttctaccaatg
gatctgggcactttctatagagagtttcaaaaccctcctcaactcgcaagcctgtccatc
gatgtcagcgctcaatctatggctgaagacttggactctcttccagagaaactggccatt
tatgagaagaacattgacgagtttgatgcgtttgtggacaccctacaatag
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