Megalobrama amblycephala (Wuchang bream): 125265078
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Entry
125265078 CDS
T08212
Symbol
katnb1
Name
(RefSeq) katanin p80 WD40 repeat-containing subunit B1
KO
K18643
katanin p80 WD40 repeat-containing subunit B1
Organism
mamb
Megalobrama amblycephala (Wuchang bream)
Brite
KEGG Orthology (KO) [BR:
mamb00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
mamb04812
]
125265078 (katnb1)
Cytoskeleton proteins [BR:
mamb04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Microtubule severing proteins
125265078 (katnb1)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
Katanin_con80
WD40_Prp19
Beta-prop_EML_2
WD40_WDHD1_1st
WD40_CDC20-Fz
WDR55
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_2nd
EIF3I
Beta-prop_CAF1B_HIR1
ANAPC4_WD40
Beta-prop_EML
WD40_MABP1-WDR62_2nd
Beta-prop_WDR75_1st
WD40_MABP1-WDR62_1st
Beta-prop_DCAF4
Beta-prop_IFT122_1st
NBCH_WD40
Beta-prop_TEP1_C
Beta-prop_SCAP
Beta-prop_IFT140_1st
Beta-prop_SPT8
Beta-prop_EIPR1
Beta-prop_Vps41
WDR90_beta-prop_4th
Beta-prop_HPS5
WD40_RFWD3
Beta-prop_RIG_2nd
Beta-prop_WDR19_1st
Beta-prop_RIG_1st
Beta-prop_DCAF12
eIF2A
Beta-prop_VPS8
PROPPIN
Beta-prop_LRRK2
Beta-prop_WDR35_TULP_N
WD_LRWD1
Beta-prop_IP5PC_F
Ge1_WD40
VPS8_N
RMC1_N
Cytochrom_D1
Motif
Other DBs
NCBI-GeneID:
125265078
NCBI-ProteinID:
XP_048041005
LinkDB
All DBs
Position
LG3:30498166..30517057
Genome browser
AA seq
694 aa
AA seq
DB search
MALTNTTIIAWKLQEIVAHSSNVSSLVLGKSSGRLLATGGEDCRVNIWAVSKPNCIMSLT
GHTSPVECIQFNGSEERVVAGSQSGSLRLWDLEAAKILRTLMGHKASICSLDFHPMGEYL
ASGSVDSNIKLWDVRRKGCVFRYKGHTQAVRCLAFSPDGKWLASASDDSTVKLWDLIAGK
MITEFTSHTSAVNVVQFHPNEYLLASGSADRTVKLWDLEKFNMIGSSEGETGVVRSILFN
PDGGCLYSGSENTLRVYGWEPDRCFDVVHVGWGKVSDLAISNNQMIAVTYSQTNVSWYVV
DLNRVKKSGSVIQGLIQDKPIPAPTSALGTTLRRNYERPTTSCTGQEMKQSSEADRRSPE
GERRSPSSEDEKEDKESSAEITNPEDYKEIFQPRSVISRTPPKSTEPFPAPLEHSFSESV
LEKPSPAVKIVTPVMDKAGQLKPPITTSTPVQRVEPTVIAAAPRPVAVVTTSVTSPSRPV
VTTTKPKPSTGIILSTRNEPIGLNAGDFLSHARNAKASMMGDEEALAQIRKGHDTMCVML
TSRYKNLDTVRSVWASGDVKTSLDSAVSMNDLSIVVDILNIINLKPSLWKLDLCTSILPQ
IEELLQSKYESYVQTGCMSLKLILKRFWPLISDTLTAPPSVGVDITREERHRKCKACYKQ
LKNLSNVVKNRAEQVGRHGSTFKELQLLMAPLDY
NT seq
2085 nt
NT seq
+upstream
nt +downstream
nt
atggctctcaccaacaccactataatagcatggaaactgcaggagattgtagctcactcc
agcaatgtgtcttcactggtgttggggaaatcatccggtcgtctactggccactggtggc
gaagactgcagagtcaatatctgggctgtcagcaaaccgaactgcattatgagtctgacg
ggccacaccagccctgtggagtgtatccagttcaacggttctgaagagcgtgtggtggct
ggttctcagtccggctctctccggctttgggatttggaggctgctaaaattctgcgtact
ttgatggggcacaaggccagtatctgcagtctggactttcaccccatgggagaatacctg
gcatctggctccgtggatagcaatattaagttgtgggatgtgagaaggaaaggatgtgtg
ttcagatacaagggtcacactcaggctgtgcgctgcctagccttcagtcctgatgggaaa
tggcttgcttcagccagtgatgacagcacagtaaagctgtgggatctcatagcaggcaag
atgatcactgaattcacatcacacacatcagcagtcaatgttgtgcaattccaccccaat
gagtacctgctcgcctctgggagtgcagatcggactgttaagctgtgggacctggagaaa
ttcaacatgattggctcgtcagagggcgagacgggagttgtgagaagtatattgtttaat
cctgatggtggctgcttgtacagcggctcagagaacacgctacgagtgtatggctgggag
cctgaccgctgctttgatgtagtccatgtaggctggggcaaagtgtctgacctggccatc
agcaacaaccaaatgattgcggtgacatacagtcaaactaacgtgagctggtatgttgtg
gatctcaaccgagtgaagaagtcaggatctgtgattcaagggttgattcaggacaagccg
atcccagctcccacatctgcacttggaacaacactacggcggaattatgagcggcccact
acatcctgcacgggacaagagatgaagcaaagttcagaggctgatcgccggagtccagaa
ggagagcggagaagtcccagcagtgaggatgagaaagaagacaaagaaagcagtgcagaa
atcaccaacccagaagattataaagagatctttcagccccgcagtgtcatctcacgaacg
ccacctaaaagtaccgaacctttcccagcaccgctagagcactctttctcagagagtgtg
ctggagaaacctagcccagcagttaagattgtaactccagtaatggacaaggcaggacag
ttgaaacctcctattaccacctctactccagtacaaagagtggagccaactgtgatcgct
gctgctccccgtccagttgctgtggtgaccacatcagtgacctctccttctcgtcctgtg
gttactaccaccaaacctaaaccctctacaggaatcattctctcaacacgcaacgaaccg
attggtctcaatgcaggggacttcctttctcatgcacgaaatgctaaagccagcatgatg
ggagatgaagaggcgttagcgcagatcaggaaagggcatgacaccatgtgcgtaatgctg
accagtcgatataaaaacctggacacagtacgctccgtctgggctagtggtgatgtcaag
acctccctggattcagctgtgtctatgaatgatctgtctattgtggtggacatccttaac
ataatcaacctaaaaccatcactgtggaaattggacctctgtacatccatcttgccacag
attgaggaattgctgcagagcaagtatgaaagttatgtgcagactggttgtatgtctttg
aagctgattctgaagcgtttttggccgttaatctcagacacactgactgctcctccgtct
gtaggggtggacattactcgagaggagaggcatcggaaatgtaaagcatgctataagcag
ttaaagaacctcagtaatgtagtgaagaaccgggcggagcaggttggtcgtcatggcagc
actttcaaagagctacaactacttatggccccattggactactga
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