Megalobrama amblycephala (Wuchang bream): 125265146
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Entry
125265146 CDS
T08212
Symbol
lingo1b
Name
(RefSeq) leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 1-B isoform X1
KO
K23533
leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein
Organism
mamb
Megalobrama amblycephala (Wuchang bream)
Brite
KEGG Orthology (KO) [BR:
mamb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mamb04131
]
125265146 (lingo1b)
Membrane trafficking [BR:
mamb04131
]
Endocytosis
Lipid raft mediated endocytosis
RhoA-dependent endocytosis
125265146 (lingo1b)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_5
LRR_4
I-set
Ig_3
ig
Ig_2
LRRNT
LRR_9
LRR_EndoS
LRR_RPS2
LRR_Zer-1
V-set
Motif
Other DBs
NCBI-GeneID:
125265146
NCBI-ProteinID:
XP_048041149
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All DBs
Position
LG3:complement(32222231..32237249)
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AA seq
622 aa
AA seq
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MTFLQVTIKMVAREASGHSYLVACWQPILILMLGTVLSGSATGCPSRCECSAQERSVVCH
RRKLMALPEGIPIDTRLLDLSKNRLKAINPEEFLNYPHLEELQLNENTISVIEPGAFSNL
LGLRTLGLRNNKLKLIQLGVFTGLSNLTQLDISENKIVILLDNVFQDLYNLKELEVGDND
LVFISHRAFHGLSSLEQLTMERCNLTSVPTEAFSHLHNLMTLRLRHLNINTIRDFSFRRL
YRLKVLEIANWPLLETLTAKSLHGLNITTLSITNCNLTAVPYVAIQHLVYLRFFNLSFNP
IEVVEGNKMHNLLRLQAFHLVGGRLVSIEPYSFRGLNYLRVLNVSSNKLSTLEESAFHSV
GNLETLALHDNPLACDCRLLWVFRRRWRLNFNRQQPSCETPEFLQGKEFKDFPDVLPTNY
FTCQKSKIRDHKAIHRFVDEGTTVQFPCQADGDPVPMIIWQSPKKQFITTKSIGRLSVSP
DGTLEVRYAQIQDNGTYMCIAVNAGGNDTRLAHLHVHSYSPNWPHQPNKTFAFISNQPND
NSANGTGATDPFPFDMKTLIIATTMGFISFLGVVLFCLVLLFLWSRGKGNAKPNIEIEYV
PRKVDGENSPTEGSHKISMKMI
NT seq
1869 nt
NT seq
+upstream
nt +downstream
nt
atgacgtttctgcaggttaccatcaaaatggtggccagagaggcaagtgggcacagctac
ctggtggcatgctggcagcccattctcatcctgatgctgggtaccgtgctgtccggctct
gccactggctgcccctctcgctgtgagtgcagtgcccaagagcgctcggtcgtgtgtcat
cgccggaagctgatggccctccccgagggaattcccattgacacgaggctgttagatctc
agcaagaaccgtttgaaagccatcaatcctgaggaatttctcaattacccacacctagag
gagctacagcttaatgagaacaccatttccgtcattgaaccaggggccttcagcaacctc
cttggcttgcgaacactgggactacgcaacaacaagctgaagttgattcagctgggtgtt
ttcactggcctcagtaacctcactcagttagacattagtgagaataaaattgtcattttg
ttggacaacgtgtttcaagacctctacaacctgaaagagctggaggtgggggacaacgac
ctggtgttcatctctcaccgagcttttcatggcctcagcagcctagagcagctcactatg
gaaagatgcaacctgacctctgtgccaacagaggccttcagtcatctgcacaacctgatg
accctcaggctgcggcatctgaacatcaacaccattcgagacttttccttcaggaggctt
tatcgactcaaagtcttagagatagcaaactggcctcttttagaaaccttgaccgcgaag
tccctccatggactcaacatcacaaccttgagcatcacaaactgcaatctcactgccgtc
ccttacgtggccattcagcacctggtgtaccttcgatttttcaacctgtccttcaatccg
attgaggttgtggagggcaacaaaatgcacaatttgctgaggctccaggcttttcacttg
gttgggggccggctagtcagcatcgagccttattccttcagaggactcaactaccttcgt
gttctcaatgtatccagcaataaattaagcactttagaagagtctgcctttcactcggtc
ggcaatctggagacactggctcttcatgacaaccccttagcatgcgactgtcgtctcctc
tgggtctttcgccgtcgatggagacttaatttcaaccgccagcagccatcttgtgaaaca
ccagagtttttgcagggtaaagagttcaaagacttcccggatgttctcccgacaaattat
ttcacttgtcagaaatctaagatccgagatcacaaagccattcatagatttgtggatgag
gggaccactgtccaattcccttgccaagcagatggagaccccgttcccatgattatatgg
cagtctccaaaaaagcaattcatcacaactaaaagcattggccggctgtcggtgtctcct
gatggcaccttagaggttagatatgcccaaattcaagacaatggcacatacatgtgcatt
gccgtcaatgcaggaggtaacgacacccgtttggctcacctacatgttcatagctactct
cccaattggccccatcaacctaataagacctttgccttcatttcgaaccagcccaatgat
aacagtgccaatggaactggtgcgacggatccctttccctttgatatgaagactctcata
atcgctaccaccatggggtttatctctttcttgggagtggtgttgttctgtctggtgctc
ttgttcctctggagtcgagggaaaggcaatgccaagccaaacattgagattgagtatgtg
ccacggaaagtagatggagaaaacagcccgactgagggatctcacaagatcagtatgaag
atgatttaa
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