Megalobrama amblycephala (Wuchang bream): 125265268
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Entry
125265268 CDS
T08212
Symbol
arhgef11
Name
(RefSeq) LOW QUALITY PROTEIN: rho guanine nucleotide exchange factor 11
KO
K12331
Rho guanine nucleotide exchange factor 11
Organism
mamb
Megalobrama amblycephala (Wuchang bream)
Pathway
mamb04270
Vascular smooth muscle contraction
Brite
KEGG Orthology (KO) [BR:
mamb00001
]
09150 Organismal Systems
09153 Circulatory system
04270 Vascular smooth muscle contraction
125265268 (arhgef11)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mamb04131
]
125265268 (arhgef11)
Membrane trafficking [BR:
mamb04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
125265268 (arhgef11)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RGS-like
RhoGEF
PH_16
PDZ
PDZ_6
PDZ_2
RGS
Pept_S41_N_bact
Motif
Other DBs
NCBI-GeneID:
125265268
NCBI-ProteinID:
XP_048041343
LinkDB
All DBs
Position
LG3:complement(40130403..40166523)
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AA seq
1443 aa
AA seq
DB search
MSVRHPTSTLDSPFAAWLSSLTLGDSERRSSPGQQREALSDLPSDNTGTGLVQRCVVVQR
DNLGFGFTVCGERIKLVQNVRPGGAAVKAGVQEGDRIIKVNGSVVSSMSHQEVVKMIKSG
TYVALTLQGPPPSAASVPLQPLPTDLLPNHRTALGGEAPPPPLTPPTGSSTPTQRITGPK
PLQDPEVQKHATEILRKMLEQEEAELQNLLEEQSRNPSPSLEERIESAKRRANQVRVKFQ
QDVDGTRSEAVANYLTAGEGRLSMDSSEGDVEACESPFSSPSTFLRNPLLRRQGSDTHPS
DSGGKMQIIGPEEEEEEDDGYTINEMDGPFQDIELLKSRPAHMTVFMRYVFSQLLDPNPL
LFYLCVEAYLGSSPKDARSLAPQICSHFLDHDAPLKIKVREEFLTDIENRLHVQEDIRGP
LSELQQQVLPDIQDQLQDYRNKQTMGLGSLFGESDLQQLDGDPVKERQVVDKQVVALWEI
LSKHEEDRSSPLASAVLLYLRHSGIKLRDSKVFPGLMSEKEKWLPFFPKAKKLSSAKREK
DGEDKKRNPILKYIGKPRSTSQSTFHVPLSPAEVRPGSVRNIIQQFESNSDSVEDGDVEG
QRLSSSSFGEDSMESPTISVRLARSESLKAQGEGRRRGGGTGVESVPRSRSDVDMEDCEE
REGPGLRPLHHSASSSASSSSARSFENPTPPYTPRSQRRVVDTPVALLPDAPALEEDVID
SQNWQETVEPHVLMSLTSREIDRQAVIYELYTTEASHLRTLRVLDQVFYQKMQSVLSPEE
LSCIFLNLRQVYELHANLCESMKKRRETPIVQGIGDIMLAQFEGEAGDQFEEQVSHLCSQ
QSQALELIKNKQRKDPRFSHLIQECEASPHCRRLQLKDLLVSEMQRLTKYPLLLDNIIKY
TEISSPDLAALQRAQACCRGILQAVNEDVRETEHRHRLSQYQRRLDLTPLERQANPAAAQ
FKNLDLTTKRMIHEGPLTWKVSKDKAIEIQALLLSDLLVLLQKGPDERLILRCPSRSLGG
VGGGATDLKTPFCPVVRLDSSLVRSVATDNKALYVISTSERQIYELVAGTSSEKNTWKDQ
LEKTIASATQASGSTKLGSPARSSGVPPSANQLDVSLSESSVSLERDSASDDECALRPTT
PTDQSEASCREDGDGYLQTKAGVAEAALQDVETLRQLIFRDLEDGWSQDSDDTPTNETAN
ERSSFTDRPGAELSEPAPSETPSQWGEEPVEAPPLEVLQPAVQVVRKVVGAGCSLPDDIT
DDVTASQSSQDRGNMFYLVMPKEQSSSLTDESSTDELKDSDASENKPSDEQVFSSSFINE
EEEQETPCLSPTDQSLTETLRRREGLGHSQMSIQRHVIRNVDEIFNTMEELMRKLQHLRD
IEADHYKLLKKLRKPLPAGKMSSDLVDKSPAAVRIPSLDRGAGDGKEGVSTEPAQPEIQS
TGF
NT seq
4332 nt
NT seq
+upstream
nt +downstream
nt
atgagtgttcgacatccgacctccacgctggacagtccttttgctgcttggttgagcagt
ttgacactaggagactcggagcgcagatcttctcctggccagcagagggaggcactgtct
gatctcccctcggacaacacagggacgggtttagtccaaagatgtgtggttgtgcagagg
gacaatctggggtttggcttcaccgtgtgtggcgagagaatcaaactagtgcaaaatgtt
cggccaggtggagcagcggtcaaagctggggttcaggaaggagaccgaatcattaaggtc
aatggttcggtggtttcatccatgtctcatcaggaagtagtaaagatgatcaaatctggg
acatatgtggcgttaactcttcagggcccgcctccttcagccgcgtccgtcccgcttcag
cccctccctactgacctcttgcccaatcacaggacagcactgggtggcgaagccccacct
cctcctcttaccccacccacaggaagcagtaccccaactcagagaatcacaggacccaaa
ccattacaggaccccgaggtgcagaaacacgccacagaaatcctcagaaagatgttggag
caggaggaggcagagctacagaaccttctggaggaacagtctcgaaacccatctccttca
cttgaggaacgaatagaaagtgccaaacgaagagccaatcaagtcagagtgaagttccag
caggatgtggatggcactcgatctgaagctgttgctaactatctcacagctggagaaggt
cggttatcgatggactccagtgaaggagatgtcgaggcgtgtgagagtcccttctcttcc
ccctccaccttcctcaggaatcccctgctccgccggcagggatccgacacgcacccctca
gactcgggaggaaagatgcagatcattggtccagaagaagaagaagaggaggatgatggt
tatacgatcaatgagatggacgggccgtttcaggacatagagctgctgaaaagtcgtccg
gcacacatgacggtgttcatgagatacgtgttcagtcaactactggatcccaacccactg
ctgttttacctgtgtgtggaggcatatctgggctcgagcccgaaagacgcccgttcgctc
gcccctcagatctgctcacacttcctggaccatgatgctcctctgaagattaaagtgcgt
gaggagtttttgactgatatagagaatcgcctccacgtgcaggaggacattcgagggccg
ctctctgaactccagcagcaggtgcttccagacattcaagaccagcttcaagactacagg
aataagcagacgatgggtctgggttctctgtttggagagagcgacctgcagcagttagac
ggagaccctgtgaaagagagacaggtggtggacaaacaggtggtggcgctttgggagatc
ctatcaaaacatgaggaggacagaagttctccgctagcatctgcggttcttctgtatctc
agacactcgggcattaaactcagagactctaaagtgtttcctggcttgatgtccgagaag
gaaaagtggcttccattctttcccaaagctaaaaagctgagcagcgcaaaaagagagaag
gatggagaagacaagaaacgaaatcccatactgaagtacatcgggaaacccaggagcaca
tctcagtccacgttccatgttccgttgtcccccgctgaagttcgtccaggcagcgtgcga
aacatcatccagcagtttgagagtaattcagactccgttgaggacggagatgttgaggga
cagcgattgtcttcaagcagctttggagaggacagcatggaaagtccaaccatatcggtg
cgtttggctcgcagcgagtctttgaaagctcagggggaggggcgtcgacgaggaggcggg
acgggggtggagtctgtcccgcgttcccgtagcgacgttgacatggaggactgtgaggag
agggaggggccgggactgagaccgttacatcacagtgcctcgtcttcagcttccagcagc
tccgcacgatcgtttgagaacccgacaccaccgtacacgcctcgttctcagcgaagggtt
gtggacactccagtggctctgttaccggatgctccggctttagaagaggacgtgatcgac
tctcagaactggcaggagacggtggagccgcatgtactgatgtcacttacttcacgagaa
atcgacagacaagccgtcatttacgagctgtacaccacggaggcttctcacctgcggacg
ctgagggttctggatcaggtgttttatcagaagatgcagagcgtcctcagtccggaggag
ctgtcctgtatcttcctgaacctgcgtcaggtctatgaactacacgcgaacttatgcgag
tccatgaagaagcgcagggaaacgccaatcgttcagggaatcggtgacatcatgctggct
caattcgagggagaggctggagatcagtttgaggagcaggtgtcccatctgtgcagtcag
cagagtcaagcgctggagctcatcaagaacaagcagcgcaaagaccctcgattctcccac
ctcatacaggaatgtgaggccagtcctcactgccgcaggttacaactaaaagatctgctg
gtgtctgagatgcagcgcttgactaaatatccactgctgctggacaacatcatcaaatac
acagagatttcctctcctgaccttgcagctctgcagagagcacaggcctgttgccgcggg
attctgcaggctgttaacgaggacgtcagggagacagagcaccggcataggctcagccaa
taccagcgcaggctggacctcacgcctctggagagacaggccaatcccgccgcagcacag
ttcaagaatctggatctcaccactaagaggatgatccatgaggggccgctcacgtggaaa
gtcagcaaagacaaagccatcgagatccaggcgctgttgctctcagatctgctggtgctg
cttcagaagggtccagacgagcggctcatcctgcgctgtccgtcacgctcgctgggtgga
gtcgggggtggagctacagacctcaaaacaccattctgccctgtcgttcgcctcgactcc
tccctcgtccgatcagtcgcgacagacaataaagcgctgtatgttatcagcacatcagag
agacagatctatgagctggtggccgggacgtcatcagagaagaatacttggaaagaccag
ctggaaaagacaatcgcttcagccactcaagcatcaggatcaaccaaactaggatcacca
gcacggtcctcaggtgtgccgccatctgccaatcagttagatgtgtctctgtcggagtcg
tccgtgtctctggagagggactctgccagtgatgatgaatgtgctctgaggcccaccaca
cccacagaccaatcagaagcgagctgtcgcgaggatggggacggttacctccaaactaaa
gctggtgtcgcagaagctgctcttcaagatgtggaaaccctccgacagctgatcttcaga
gacctggaggacggatggagtcaagattcagatgacacgcccacaaatgagacggccaat
gaaagaagctcttttacagacagaccgggggcggagttgtctgagcctgcccctagtgag
actcccagtcaatggggggaggagcctgtagaagctccgcctctggaggtgctgcagcct
gctgttcaggttgtgaggaaagtcgtgggtgcgggctgttctcttcctgacgacatcacc
gatgatgtcaccgccagccaatcctctcaggacagaggaaacatgttttatctggtcatg
cccaaagagcaatccagttctctcacagacgagagcagcacagatgagctcaaagactcg
gacgcgtctgagaacaagccatcagacgagcaagtgttctcatcgtccttcatcaacgag
gaagaggagcaagagacgccctgcctctctccaactgaccagtcgctgactgagactctg
agacgaagggaagggctcggccattctcaaatgagcatccagcggcatgtgatcaggaac
gtggacgagatctttaacaccatggaggagcttatgaggaaactgcagcacctgagggac
attgaagcagatcactacaaacttctgaagaaattaagaaaaccacttcctgctggtaaa
atgtcaagtgatctcgtcgacaagtctcccgcagcggtccgaataccatcactggaccga
ggagcaggagatggtaaggagggcgtctcgacagaaccagcccagccagaaatccagtcc
actggtttctga
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integrated database retrieval system
