Megalobrama amblycephala (Wuchang bream): 125265368
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Entry
125265368 CDS
T08212
Symbol
rin1b
Name
(RefSeq) ras and Rab interactor 3 isoform X1
KO
K17638
Ras and Rab interactor 1
Organism
mamb
Megalobrama amblycephala (Wuchang bream)
Brite
KEGG Orthology (KO) [BR:
mamb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mamb04131
]
125265368 (rin1b)
Membrane trafficking [BR:
mamb04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
125265368 (rin1b)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
RIN1
VPS9
SH2
Motif
Other DBs
NCBI-GeneID:
125265368
NCBI-ProteinID:
XP_048041474
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Position
LG3:42437619..42473137
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AA seq
740 aa
AA seq
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MWRALHQPSMMDASLQRSLSVLDRLLLTHSIWLQLSVNPDSAHQILQREIVGTFLVCKCS
ASHRKVLCVRVQEGGVSQYPIREEDSTFSLESSALSFPDLCRLVAFYTISRDVLPFPLDL
PEAIIQATTHTQLESISHLGLEFWSSQTSPGLPNGPPPPSAPHRTSRLISPCFVNPLFLQ
PPQPSRTASHKRHRFKRSLRVRVSNETSLSLSGGESDLTQGETHGQTANQGGPRRTGGLS
VLRRTPALTPTSEEEDEQMLGQIPPSNSLPQRDNTELNKDTEDGEVCLALERTRAPSLAE
LDSNSSFSSLEEEEAQADFAAQWPPAARGTRFPSANPTSTLRRMTAAFVCVFAPERRVAR
LVDELSHDRRSTFGSLVQDFLEKQRQEMEASTHSSAVELLQGMRRFLSQAKILLLEAGEI
EPPIETLVPENEKDLALEKALFGCVLKPLKIQLHQTLVSLHTQDGSLQRITDSMLAFQEG
ALERLAVQVGVLDVRGVDRAKAKLTLMQRSHSPIDKVLLLLQVCKSVYKAMETQPDQEVG
SEDFLPALSYVLVQCNIPQLLLETEYMMELLEPSWLTGEGGYYLTSVYASLCLIQSKPGT
PPTCSLTNEAQEYLREWSRRRGQEAKTQKDSQQKQRFIRVLFQDDIRSAVRTLLWKAGEN
VDALAQACAGLFGVSEPQHYCLFWRSEGEMRPLPAHTQPHQLGMHEGASLSYLRCDHDFS
KMRRLTRGGAVDLGESVCEE
NT seq
2223 nt
NT seq
+upstream
nt +downstream
nt
atgtggagagctcttcaccagccatccatgatggacgcgtctctccagaggagtttgagt
gttttggatcgtcttctcctcacacactccatatggttgcagctgtcagtcaaccctgac
tctgcccaccagatcctgcaacgagagatagtcgggacgtttctggtgtgtaagtgtagc
gcctcccacaggaaggttctgtgtgtgcgggtgcaggagggaggtgtgtcacagtatccc
atccgtgaggaagactccacattttctctagaaagttctgccctgagcttccctgatctc
tgcagactagtggcattttacaccatcagcagagatgtattacctttcccactggatctc
ccagaagcaattatacaggccacaacacacacccagctggaaagcatttcgcatctgggt
ttagagttctggagctctcagacgtcccctggccttcctaatggcccccctccaccctca
gcgccccaccggacatccagattgatcagcccatgttttgtaaatcccctgttccttcag
cctccccaacccagcagaactgcctcacacaaacgccaccgcttcaaacgcagcctcagg
gttcgtgtgtccaatgaaacctctctcagcctgtcaggtggagaatcggacctaacccag
ggggagacgcatggacagactgccaaccagggaggcccaagacggacaggaggattgagt
gtgctcaggaggactccggccctcactcccacttcagaagaggaggacgaacagatgttg
ggacagataccacccagtaactccttaccccaaagagacaacactgaactcaacaaagat
actgaagatggtgaggtgtgtcttgctttggaaagaactcgtgctccttcccttgctgaa
ctggacagcaatagttctttcagcagcctggaggaggaggaagcacaggcagactttgcc
gcccaatggccgcctgccgcacgtggtactcgtttcccctcagcgaacccgacctcgact
ctgcgccgcatgaccgccgcctttgtatgcgtgtttgctcctgagcgccgagttgcccga
ttggtggatgaactctcccatgacagacgctccacgtttgggtcattggtgcaggacttc
ttagagaaacagaggcaggagatggaggcctcaacgcatagttctgctgtggagctgctt
cagggcatgaggagatttctgtcccaagctaaaattctcctccttgaagcaggagaaata
gaacctccaattgagacgctggtgcctgagaacgagaaagatctagccctggaaaaggct
ctgtttggctgcgtgttgaagccattaaagattcagctgcaccagacgctcgtctctctc
cacactcaggatggctctttacagaggatcacagacagcatgctggccttccaggaaggg
gcactggagcgcctggctgtacaagtgggagtcctggacgttcgtggtgtagacagagca
aaggcaaagcttacgctgatgcagcgcagccattcgcccattgacaaggtgttgcttttg
ctgcaggtgtgcaagagtgtgtacaaggctatggagacgcaacctgatcaggaagtgggg
tctgaggacttcctaccagcactgtcctatgtgctagttcagtgtaatatcccacaactg
ctgctggagacggagtacatgatggagctgcttgagccgtcatggctaacaggagaggga
ggatactatttgacgagtgtgtatgccagcctatgtctgatccagagcaagcctgggacc
ccgcccacctgcagtctgaccaatgaggctcaagagtacttgcgggagtggagcaggagg
cggggccaagaagccaagacccagaaggacagtcagcagaaacagaggttcatccgtgtg
ttattccaggacgacattcgtagtgcagtgcggactcttctctggaaggcgggggaaaat
gttgatgctttagcccaggcctgcgccggtctgttcggcgtgagcgagccacagcactac
tgtctgttctggagaagtgaaggggaaatgcgtcctctaccggcccacacacagcctcat
cagctgggcatgcatgagggagcatccctgtcgtacctccgctgcgatcacgacttcagc
aagatgcgcagactgaccagaggcggcgccgtagatctgggagagtcggtgtgtgaggag
tga
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