Megalobrama amblycephala (Wuchang bream): 125265385
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Entry
125265385 CDS
T08212
Symbol
kars1
Name
(RefSeq) lysine--tRNA ligase isoform X1
KO
K04567
lysyl-tRNA synthetase, class II [EC:
6.1.1.6
]
Organism
mamb
Megalobrama amblycephala (Wuchang bream)
Pathway
mamb00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
mamb00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
125265385 (kars1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
mamb01007
]
125265385 (kars1)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mamb03016
]
125265385 (kars1)
Enzymes [BR:
mamb01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.6 lysine---tRNA ligase
125265385 (kars1)
Amino acid related enzymes [BR:
mamb01007
]
Aminoacyl-tRNA synthetase
Class II (A)
125265385 (kars1)
Transfer RNA biogenesis [BR:
mamb03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
125265385 (kars1)
Prokaryotic type
Other AARSs
125265385 (kars1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
tRNA_anti-codon
tRNA-synt_2d
DUF374
Motif
Other DBs
NCBI-GeneID:
125265385
NCBI-ProteinID:
XP_048041518
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All DBs
Position
LG3:complement(42897058..42911327)
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AA seq
588 aa
AA seq
DB search
MLTLVRICRLQAFRAQTFALPSSQSLPLLIQGSRWRSGKSELKRRMKAEKKAAEKEAKVK
EQQEQKETNDKPQQNAYGADEETLDPNQYFKIRSQAIQALKGTAEDPYPHKFNVDLSLTE
FIERYNHLQPGDHLTDVVLNLSGRVHAKRASGAKLLFYDLRGEGVKLQVMANSRNYKSEE
DFVHINNKLRRGDIIGVRGNPGKTKKGELSIIPVEMTLLSPCLHMLPHLHFGLKDKETRF
RQRYLDLILNDFVRQKFVTRSKIITYLRSFLDQLGFLEVETPMMNVIPGGAVAKPFVTHH
NELNMKLFMRIAPELYHKMLVVGGIDRVYEIGRQFRNEGIDLTHNPEFTTCEFYMAYADY
HDLIEITEKLLSGMVKHITGGYKVVYHPDGPEGQAQEIDFTPPFRRISMTQDLEKELGVK
FPAPDSYDSDETRKFLDDLCVQKEVECPPPRTTARLLDKLVGDFLEVKCINPTFICDHPQ
IMSPLAKWHRSQKGLTERFELFVMKKEICNAYTELNDPIRQRELFEQQAKAKAEGDDEAM
FIDETFCTALEYGLPPTAGWGMGIDRLTMFLTDSNNIKEVPSLPCHET
NT seq
1767 nt
NT seq
+upstream
nt +downstream
nt
atgttgactctggtcagaatatgcaggctgcaagcgttcagggcgcagacgtttgctctt
cccagttcacaaagcctgcctttgcttattcaaggaagtcgctggagaagtggcaaaagt
gagctgaaaaggcgcatgaaagctgagaagaaggcagctgagaaggaagccaaggtcaaa
gaacagcaggaacagaaggagaccaatgacaagccacagcaaaatgcgtatggggccgat
gaggaaaccctggacccaaatcaatacttcaagatacgttcacaagccattcaagccttg
aagggaacagctgaagacccgtatcctcacaagttcaatgtggacttgtcgcttactgag
ttcattgagcgatataaccatcttcagccaggggaccacttgacagatgttgtcctcaat
ttatcaggtcgtgttcacgctaagagggcttccggtgccaagctgctgttctatgacctg
cgaggagaaggagtcaagctgcaggtcatggccaactccaggaactacaagtcagaagaa
gattttgtgcacattaacaacaaattaaggcgcggggacatcattggtgtccgggggaac
cctggcaagacaaagaagggcgagttgagcatcatcccagtggagatgacgctgttgtct
ccgtgccttcatatgcttccccaccttcactttggtctgaaagacaaggaaaccaggttc
cgtcagcgatatctggacctgattcttaatgactttgtgcgacagaagtttgttacccgt
tccaagattatcacttatctccgcagctttctggaccagcttgggtttcttgaggttgag
acaccaatgatgaatgtgatacctggtggtgctgtagcaaaaccttttgtcacccaccac
aatgagctcaatatgaaactcttcatgagaattgctcctgagctttaccataagatgttg
gtagtcggaggaatcgaccgcgtgtatgagattgggcgtcagttccgtaatgaaggcatc
gatctcacccacaacccggagttcaccacatgcgagttctacatggcttatgcggactat
cacgacctgatagaaatcacagagaagcttctctcaggaatggtgaagcacattactgga
ggttataaggtggtgtatcatcctgatggtccagaaggacaagcccaggaaatagacttc
actcctcccttcagacggatcagcatgactcaagacctggagaaggaattgggagtgaag
tttccagctcctgactcctacgacagtgatgaaacacgcaagttcttagatgacctttgt
gttcagaaagaagttgaatgccctcctcctagaacgactgctcgtcttcttgataagttg
gtgggcgacttcctggaggtgaaatgcatcaacccaacattcatctgtgatcatccacag
atcatgagtcctctagctaaatggcacagatcacagaaaggtctaactgagcgctttgaa
ctgtttgtgatgaagaaggagatctgcaatgcctacacagagttgaacgatcctatcaga
cagcgagaactgtttgagcagcaggctaaggccaaggcagaaggtgacgatgaggcgatg
tttattgacgagaccttctgcactgccttagagtacggccttccacccaccgcaggatgg
ggcatgggcatcgaccggctcaccatgttcctcacagactccaacaacatcaaggaggtg
ccttctcttccctgccatgaaacctga
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