Megalobrama amblycephala (Wuchang bream): 125265450
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Entry
125265450 CDS
T08212
Symbol
taf6l
Name
(RefSeq) TAF6-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 6L isoform X1
KO
K03131
transcription initiation factor TFIID subunit 6
Organism
mamb
Megalobrama amblycephala (Wuchang bream)
Pathway
mamb03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
mamb00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
125265450 (taf6l)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mamb03021
]
125265450 (taf6l)
03036 Chromosome and associated proteins [BR:
mamb03036
]
125265450 (taf6l)
Transcription machinery [BR:
mamb03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
125265450 (taf6l)
Coactivators
SAGA/TFTC/STAGA complex
125265450 (taf6l)
Chromosome and associated proteins [BR:
mamb03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
125265450 (taf6l)
STAGA complex
125265450 (taf6l)
TFTC complex
125265450 (taf6l)
SAGA complex
125265450 (taf6l)
SLIK complex
125265450 (taf6l)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF6_C
TAF
CENP-S
Motif
Other DBs
NCBI-GeneID:
125265450
NCBI-ProteinID:
XP_048041628
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All DBs
Position
LG3:46184452..46192066
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AA seq
639 aa
AA seq
DB search
MTEREERRFAEVPRESIKLMAESTGVELSEEVAALLAEDVCYRLREATQNSSQFMRHAKR
RKLSVEDFNRALRWSNTETVCGYGAQDALPFRPLKEGELFFVEDREINLVELALATNIPK
GCAETMVRVNVSYLDGKGNLEPQGTVPTAVQSLSEDLLKYYQQITRAILGEDPHLMKVAL
LDLQSNSKIAALLPYFVYVISGVKSVSHDLDQLNRLLHMVKSLVQNPYLYLGSYVRSLVS
SVMYCILEPLAASINPLNDHWTLRDYAALLLSHIFWTHGDLVSGLYHQILLSLQKVLSDP
VRPLCSHYGAVVGLHALGWKAVERVLYPHLPAYWANLQAVLDDYSVSNAQVKADGHKVYG
AILVAVERLLKMKALSLTLATEGGSAALPGTAAGAVGFRENSPGLSPPPEPLSEPPLGIA
SHLQAGGAGCPWEEWTPVSLPAMYCELYSFFGDSLAVRFSTDPPLSGTPPTGPCQPLEGR
KEPASVAPNLESTRKMPQLTASMNISPRQDGSPRTEPQPPSLAATAPGRSLARSSSSSVS
RSRSSSSRPGRSTSQSRDIFPKARFPPPQAGPPAFAFIIGGRQMGRRCQGRRFQTSFTPT
PPLTSLPPRAYAHKLPVIGRVSKPVRRWTCSHYSLHLPL
NT seq
1920 nt
NT seq
+upstream
nt +downstream
nt
atgacggagagggaggaacggcgcttcgctgaggtgccccgggagtccatcaaactgatg
gccgagagcaccggagtggagctcagcgaagaggtggcagctctgctggctgaggatgtg
tgttaccgcctcagagaggcaacacagaacagctcacagtttatgagacatgcaaagaga
aggaagctgagcgtggaagacttcaatcgagcgctgcggtggagcaatactgagaccgtt
tgcggctacggtgcgcaagatgccttaccgttccgtccactaaaggaaggagagcttttc
tttgtggaggatcgggagataaatctggtggagttggcacttgctacaaacatccctaaa
ggctgtgcagagacgatggttcgagtgaatgtgtcatatcttgatgggaaaggcaatctt
gaacctcaaggcacagttcccactgctgttcagtctctatcagaggatctgctgaagtat
taccaacaaataacacgagccattttaggagaagacccacatctcatgaaggtggctttg
ctggacctccagtccaattcaaagattgctgccctcttgccttactttgtttacgtcatc
agtggggtaaagtcagtaagtcatgatctggaccagttaaacaggctcctacacatggta
aagagtttggtgcagaacccgtacctttatctaggctcatatgtgcgaagtctggtgtct
agtgtcatgtactgcatcctggagcctctggctgcctccatcaaccccctcaatgatcac
tggaccctgagagactacgcagcccttctgctcagccacattttctggacacatggtgat
cttgtgagtgggctgtaccatcagatccttctgtctctgcaaaaagtgctttccgatcca
gttcgacctctgtgttcccactatggagctgtagttggtctgcatgctctcggctggaag
gctgttgaacgtgtgctgtatcctcacctccctgcctattgggcgaatttacaagctgtg
ttagatgattactctgtgtctaacgctcaggtgaaagcagatggtcacaaagtctatgga
gccattctggtggcagtagaacgtttgttgaagatgaaggcactcagtctgaccttggca
acagaaggaggaagtgccgcactaccgggcactgctgcaggggctgtcgggttccgagaa
aactcacctggcctcagcccacctcctgaacccctttctgaacctcctcttggcattgca
agccatctacaagcaggtggagccggctgcccatgggaagagtggactcctgtatctctt
cctgccatgtactgtgaactctactccttttttggagacagtctggctgtacgcttcagc
actgacccgccactaagtggcaccccacctacaggtccctgccaaccactagagggcagg
aaagagccagcgagtgttgcccctaatcttgaaagtacacgcaaaatgccccaactcact
gccagtatgaacataagcccacggcaagatggaagcccacgtacagaaccacaaccgccc
agtctggctgccaccgccccggggagatctcttgcccgctcttcctcatcttccgtttca
cgttccaggtcatcttcatcacgtccaggacgttcaaccagccaatcccgagatattttc
cctaaagcccgttttccgccacctcaggctggacctcccgcatttgctttcatcattggc
gggcggcagatgggacgacgctgtcagggacgacgcttccagacgagctttactccaact
ccgcctcttacttccctcccacctcgtgcctacgcccacaagttaccggtcattgggagg
gtcagcaaacctgtgcgccgctggacgtgttcacattactcacttcatctgcctctttaa
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