Megalobrama amblycephala (Wuchang bream): 125265464
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Entry
125265464 CDS
T08212
Symbol
dtx4a
Name
(RefSeq) E3 ubiquitin-protein ligase DTX4a
KO
K06058
deltex [EC:
2.3.2.27
]
Organism
mamb
Megalobrama amblycephala (Wuchang bream)
Pathway
mamb04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
mamb00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
125265464 (dtx4a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
mamb04121
]
125265464 (dtx4a)
Enzymes [BR:
mamb01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
125265464 (dtx4a)
Ubiquitin system [BR:
mamb04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
125265464 (dtx4a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DTC
WWE
zf-C3HC4
zf-RING_UBOX
zf-RING_11
zf-rbx1
zf-RING_2
zf_RING_Vps8
PHD_NSD
WWE_5
zf-UDP
zf-RING_Vps41
Motif
Other DBs
NCBI-GeneID:
125265464
NCBI-ProteinID:
XP_048041657
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All DBs
Position
LG3:complement(46551220..46575049)
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AA seq
704 aa
AA seq
DB search
MLLASAVVVWEWLNEHGRWRPYSPAVSHHIEAVIRSDPRGAGSVVLGQVDSRLSPYIIDL
QSMHQFRQDTGTLRPVRRSFYDPRSAPGQGWVWEWENDSGSWTAYDTEVSIAIQAARDRQ
QPWLDLTPLGFCYLIDLQSMTQINGQTQRRRRIQRRSDLAYPLVSGPLPKPHAWSSAGSG
GLLGVGVSGVSGGNGSAYPSGALPASAITSLGQPCSCQQCMLVLGVKTPSMAQTLGRKPP
PIPKPPSPKAPSRGHSYSLTLPHPPSLSRVLSPHRNSTSGASGGFGHSLSLLGSATAALS
ISSNRPPPPAVPPPPPPSTIPHTTSVSNPTAPTPSNALISTATTCAPTPSARVLGPVSTA
SAACAAPVPPRSSLAGLSRPALQRIAMAQSRALIASGVPTVPVKNLNGSSPVHPALAGIT
GILMSAAGLPVCLTRPPKLVLHPPPVSKSDIKPVPGLGHCCRKTTKKQARKGRTSEEVVR
RYLQKVRNPPEEDCTICMESLCGPSGYKGPGVGGISRAESVGRLSQCGHQYHLQCLVAMY
NNGNKDGSLQCPTCKTIYGVKTGNQPPGKMEYHVIPHSLPGHPDCKTIRIIYNIPPGIQG
PEHPNPGKPFTARGFPRHCYLPDSEKGRLVLKLLLVAWDRRLIFSVGTSSTTGETDTVIW
NEVHHKTEFGSNLTGHGYPDSGHLDNVLEELRAQGITEEECLRD
NT seq
2115 nt
NT seq
+upstream
nt +downstream
nt
atgttgttagcctcggccgtggtcgtctgggaatggctgaacgagcacgggcgctggcga
ccctacagcccggcggtgtcccatcatatcgaggcggtgatccgcagcgaccctcgcggc
gccgggagcgtggtgctgggccaggtcgactcgcgactatcgccgtacatcattgacctg
cagtctatgcaccagtttcggcaagataccgggacactaagacccgtgcggcgaagtttc
tatgacccgcggtcggctccggggcagggttgggtgtgggaatgggagaatgactcggga
tcgtggacggcgtacgacacggaggtcagcatcgccatccaggcggctcgggaccggcag
cagccctggctggacttaacgccgttgggcttctgctaccttatagacctgcagagtatg
acgcagatcaatggacagacgcaacggcgccggcgcatccagaggcgctcagacctggcc
tacccgctcgtctctggtccactacctaagccgcacgcgtggtcgtccgctggaagcggt
ggactcttgggggtgggagtttcaggggttagtggagggaatggcagtgcctatcccagt
ggagctctcccagcttctgctattacttcactgggtcaaccatgttcctgccagcagtgt
atgctagtcttgggcgtcaagacccctagcatggcacaaactcttgggcggaaaccaccg
ccgatacccaagccgccaagcccaaaggcgccatcaaggggacactcttactctcttacc
ctgcctcaccctccttccctttccagagtcctctcgccacataggaactccacctcaggt
gctagcggaggcttcggacactccctctctctgctgggttcagccactgcagccctgtcg
atatcctctaaccgtcctcctccacctgctgtaccgccacccccgcctccttctaccata
ccccacacgacctctgtgtccaaccctacagcacctacaccctccaacgcccttatatct
acagcgaccacctgcgctcccacgccctctgctcgtgttctgggtcctgtgtccacggca
tcagcagcttgcgctgccccggtgccacctcgcagtagtctggcaggccttagccgcccc
gccctgcagagaatcgccatggcacaatcacgggcacttattgcatcaggagtccccacc
gtcccagtgaagaacttaaatggatccagtcctgtccatccagctttggcaggtatcact
gggattctaatgagcgccgctggactcccagtctgcttgacccgcccacccaaacttgtg
ctccaccccccacctgtcagcaagagcgacattaaacctgtgccaggcctcggccactgc
tgccggaaaactacaaagaagcaggcccgcaaaggtagaacttcagaagaggttgttaga
agatatctccagaaagtccgcaacccaccggaggaggattgcactatctgtatggagtct
ctctgtggcccatctggctataaaggcccaggtgtcggtggcatttctcgggcagagtcg
gtcggtcgtctgtctcagtgtggacatcagtaccacctgcagtgcctggtggccatgtac
aacaacggcaacaaagacggcagccttcagtgtcccacctgcaagaccatctacggtgtt
aaaaccggcaaccagccaccaggcaagatggaataccatgtcattcctcactcccttcct
ggacaccctgactgcaaaaccatccggattatctacaacataccccctggcattcagggt
ccagagcatcccaaccctgggaagcccttcacagctcgtggatttccaagacactgctac
ctccctgacagtgagaaaggccgtctggtgttgaagctgctgctggttgcttgggaccgc
cggctcatcttctcggtgggcacatccagcaccacaggcgagacggatacggtcatttgg
aacgaggtgcatcacaagaccgagttcggctccaacctgaccggccacggttacccagac
tccggccaccttgacaatgtcctggaggagctgagggcgcaaggcatcactgaggaagag
tgtctgagggactga
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