Megalobrama amblycephala (Wuchang bream): 125265746
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Entry
125265746 CDS
T08212
Name
(RefSeq) phospholipid-transporting ATPase ABCA1 isoform X1
KO
K05641
ATP-binding cassette, subfamily A (ABC1), member 1
Organism
mamb
Megalobrama amblycephala (Wuchang bream)
Pathway
mamb02010
ABC transporters
mamb04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
mamb00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
125265746
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
125265746
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
mamb02000
]
125265746
Transporters [BR:
mamb02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
125265746
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
R1_ABCA1
AAA_21
DUF4162
AAA_15
AAA_23
Motif
Other DBs
NCBI-GeneID:
125265746
NCBI-ProteinID:
XP_048042119
LinkDB
All DBs
Position
LG3:56877167..57100000
Genome browser
AA seq
2292 aa
AA seq
DB search
MDHGKQTLGQRDNRRDVSEMARALRQTSTWQRRCSCTLLDRGNTVHIPIATYQLLIMSLL
TQLRLLLWKNFTLRRRQKVRLLVELIWPLFLFFILVAVRSTNQPVYKSQCHYPNKPLPSA
GVLPWIQGMLCNLQNPCVSYPTPGEAPGQVNNFKDSTVTKVLIEIQSLLADPALFSNVKL
ISDDIGQWSSILQNANPAGGQSIPLRSLLRTNETFSEYLTNSLSVPNTTATSLMRVRVRL
GQLPTLSSEGDLRSVLCGESVDRILEFNSANQKAEFQNITCSLTANQLLQARRVFMQNVD
NMKLLNALPLALGLNRLEAATLMAQTSGHIAPLMTVMSNFGFSELLSAADTLDFRSDPFG
SLSQLMCGTDSNTTSNNTRRAAVWTVSTKLDQKNTRAATADNTNTTSTNTSEFCKNLTDT
LESSPSLRLFWKTFRPFLQGKILYTPDTNVTRSIVTEANRTFDAVAKVGELAEAWLQNED
VIWDFFNSSTQINALRGLLKNPVLAVALDQSLEDTSLSTSLISNFLFNGPESQRQAGMPA
FDWRNVFSAISQAAQQLTQILRCFDLDKFEGVSSETVLVEQSLKLMIQDRFWAGLVFTDL
SDPSDLQPPTHIRYKIRMDIEETERTNKIKERSWSPTARDNPFNDLRYVRGGFVYLQDMV
DRGIIKVQTGVNQTLGVYAQQMPYPCYMDDVFLRSLARSLPLYMTLAWIFSVALIVKGVV
QEKEARLKETVRMMGLKSSIYWLSWAISSTLPLAVSAALLTVILKYGKILRYSDPSVIFV
FLLVFCVATVMQCFFISVFFSRANLAAACGGLIYFLLYLPHVLCYAWRDVLGFGAKIATS
LLSCVAFGYGCENFALYEEQGIGIQWSNIRLSPQENDRYSFIVSIFMMLFDALIYWILTW
YIENVFPGQYGIPKPWYFPFTSSYWCGTRVGSDTEPDLIHELEDQKDYLEKAPSGMKPGV
CIRNLVKVYKTGNKLAVDGLSLDFYQDHITSFLGHNGAGKTTTMSILTGLFAPTSGTAYI
NGYDIRTDMDTIRTHLGMCPQHNVLFNDLTVEEHIYFYARLKGRSSKEVEKEIDQMIKDV
GLPHKRKDLAKNLSGGMQRKLSVAIAFVGNSNVVILDEPTAGVDPYARRGIWELLLKYKK
GRTIILSTHHMDEADILGDRIAIISHGRVCCCGSSLFLKKTYGRGYYLTVARANQDRVTT
QRFKECDKFSVDEGICSDSISSLDPPDVADLSRLVRRHVPEAEFLEAVGQELVYVLPYTG
ARNGSFASLFKDLDLEKSTLGVTSYGISDTSLEEIFLKVAEDTGVDVESHDKRENLEQKP
RSSSRISGIQAISSALESKDENTVKNDVKVRFTSRVEDTQRPMCANGKGSYVIMGWPLIR
QQFLALFIKRFHHGRRSRRGIIAQVVMPAFFVCLALIFSLIVPPFVEYPNLELQPWMYGA
PQNTFYSFDDPGVDQVKRVTNALLSSPGFGTRCMSTNPIPKLPCNPAGGTDWFTPAVDPS
VSEIFEKGNWSMENPSPECQCSTPQRSIMLPDCPPGAGGLPPPQRTQNTTDTLQNITARN
MTDFLLKSYQKSGKIRYGGISVGGVNSQVKLNESDITAVISDLKLFFNISQYNQTDQIFQ
AIRLVLLEIGTRDNVKVWFYNQGWHSIVSFLNVASNGILRGNLPAGRRAGDYGITTFNHP
LNLTKEQLSFVALATTSTDVVVSICVIFAMSFIPASFVLFLIQERVSKAKHLQFVSGVNP
TIYWLANFAWDMCNYVIPCIIVIIIFLCFQQKSYVSPPNLPALILLLVLYGWSITPMMYP
ASFLFSVPSTAYVVLTCINLFIGINGSVATFIMELFDDPNITKINDIVKQVLLVFPHFCL
GRGLMDMAKNQAVATLYKNLGEDRFENPLNWNMVGKNLFAMSIQGAVMFALTLLIQYKFF
CKSMSVKSLPTSLEGEDEDVARERERVHQGGAQNDLLQICDLTKVYRKKLTPAVDKVCVG
VPAAECFGLLGINGAGKTTTFKMLTGDISPTAGDAFLNGYSIRNEMQLVQQNMGYCPQFD
AIDDLLTGREHLEFYARLRGVPEKEVSMVAEWGIQKLGLVKYSEKSAGTYSGGNKRKLST
AMALIGCPPLVFLDEPTTGMDPKARRFLWDCILSIIKEGRSVILTSHSMEECEALCSRMA
IMVNGQFKCLGSIQHLKSRFGEGYTLIVRVCADHADVCVVESFVRDTFPGSTLKEKHHNT
LQYQIPQGEGTLAHIFSQLNKHQQMLQVEDYSVSQTTLDQVFVSFARQQRDEEDCVFEND
VDLNDEIQTSTT
NT seq
6879 nt
NT seq
+upstream
nt +downstream
nt
atggaccatggcaagcaaacgttgggacaaagggataatcggcgtgacgtttccgagatg
gcgagagccttgcgacaaacttcgacttggcagagacgctgctcttgcacgttattagac
aggggtaacacagttcatattcccatagcaacttatcaactgctgataatgagtctcctg
acacaactcagattgttactgtggaagaactttactctacggaggagacagaaggtgcgg
ttgctggtggagctgatttggcctctgtttctgttcttcattcttgtggcggtcagatcc
accaatcagcctgtttataaaagccagtgccactaccccaataagcccctcccatcagca
ggtgtgttgccatggatacagggcatgttgtgtaacttgcagaacccgtgtgtcagttac
cccacacctggtgaagcacctggacaggtgaacaacttcaaagactccacagtaacaaag
gttttgattgagattcagtcgctcctggcagatcctgccctcttcagcaacgttaaactg
atctctgatgatatcggccaatggtcgtccatcctacagaatgccaacccagctggaggt
cagtccattccgcttcgcagtttgctgagaaccaacgagacgttttcagaatatctgacg
aacagcctttctgtgccaaacacaacagccacgagcctgatgagggtgagagttcggctt
ggccagttgcctacgctctcaagtgagggagatctgcggtcggtactctgcggtgaatcg
gttgatcgcatcttggagtttaattcagccaatcagaaagctgagtttcagaacatcaca
tgctccttgacagccaatcagcttcttcaagccagacgagtgttcatgcagaatgttgac
aacatgaaactactaaatgcacttccattagcactgggtctgaaccggctcgaggcggcc
acactgatggcacaaaccagcggtcacatcgctccactaatgacagtgatgtctaatttt
gggttttcagaactgttaagtgcagcggacactttggacttcaggtctgatccatttgga
agcctcagtcagctgatgtgtggaacagactctaacacaacatccaataacaccagaaga
gctgctgtgtggacagtgtcaacaaaattagaccaaaagaacacacgggccgcaacagct
gacaacaccaacacaaccagcactaacaccagtgagttctgtaaaaacttgacggacaca
ctggagagctcgcccagcctacgtctgttctggaaaaccttcaggccctttctgcaagga
aaaatcctctacacgcccgacacaaatgttacacggagcatcgttacagaggccaaccgc
acctttgatgctgtggctaaagttggcgaactggcagaggcatggctgcagaatgaagat
gtgatctgggattttttcaacagcagcacacagatcaatgcactgaggggtcttctgaag
aaccctgttcttgcagtagctctggaccagagtctggaggatactagtctgtccacatcg
ctaatcagcaacttcctgtttaacggtccagagtcccagcgccaagcaggaatgccagcc
tttgactggcgtaacgtcttcagcgccatcagccaagcagcacagcaactcactcagatt
ctacggtgttttgatctggataagtttgaaggtgtcagcagtgagactgtgctggttgag
cagtctttgaagctcatgattcaggataggttttgggccggactggtcttcacggatctc
tctgaccccagtgacctccagcctccaacccacatcagatacaagatccgcatggacatc
gaagagaccgaaagaacaaacaaaatcaaggagaggtcctggtccccaacggcccgcgac
aacccatttaatgacctgcggtatgtgaggggagggttcgtgtacctgcaggacatggtg
gatcgaggaatcattaaggtccagactggagtcaatcagacgctcggagtatatgcacaa
cagatgccatacccatgttacatggacgacgtgttcttgcgatctttggcgcgctccttg
cctctatatatgacattagcgtggatcttctcagttgcgttgatagtcaagggtgtggtt
caggagaaggaggcgcgtctgaaggagactgtgaggatgatgggattgaagagctccatc
tactggctgagctgggccatcagcagcacattgccccttgctgtcagcgctgcgctcctc
actgtcattctcaagtatgggaagattctgcgatacagtgacccctctgtgatttttgta
ttcctcctggtcttctgcgtggcaactgtcatgcagtgctttttcatcagtgtgtttttc
tctcgggcgaatctggcagctgcctgtgggggcctcatctacttcctgctctacctgcct
catgtgctttgctacgcctggagggatgtcctgggctttggtgccaagatcgccacgagc
ctgctatcgtgtgttgcatttggatacggctgtgagaatttcgccctttatgaagagcaa
ggcatcgggattcagtggagcaacatccggctcagtccgcaggagaacgaccgctactcc
ttcattgtttccatcttcatgatgctgttcgacgctctcatttactggatactgacctgg
tacattgagaacgtctttccaggtcagtatggtatcccaaagccctggtattttcccttt
acttcctcgtactggtgtggcactcgggtgggatcagatactgaacccgacctgattcat
gagctggaggaccagaaagactacttggaaaaggctccgtctggaatgaagcctggtgtg
tgtatccgcaacctggtaaaggtatataagacgggaaataaactggctgtggatggactc
agtctggacttctatcaagatcacatcacctcgtttttaggacataatggagccggaaaa
accaccaccatgtcaatactgacaggtctttttgctcccacctctggtaccgcttatatt
aacggttacgacatccgcaccgacatggacaccatcaggacacacctgggaatgtgtcca
caacacaacgtcctcttcaatgatctgacagtagaagaacacatttatttttatgcccgt
ctgaagggacggagctctaaagaggtggagaaggaaattgatcaaatgattaaagacgtg
ggtctacctcacaaacgcaaagacctcgccaagaacctctcaggtgggatgcagaggaaa
ctgtctgttgccatcgcatttgtgggtaattcgaatgttgtcattttggatgagccaaca
gcaggagtcgatccctatgcacgcagaggcatctgggagttgctgctcaaatacaaaaaa
ggtcgtactataattctgtctacccatcacatggatgaagcggatattctgggtgatcgt
attgccatcatctcgcatgggcgcgtctgctgctgcggttcttcactcttcctcaagaaa
acatatggtagaggctattatctcacggtcgcacgggccaatcaggatcgagtcaccacg
caacggtttaaagagtgtgataaattcagtgtggatgagggaatatgcagtgacagcatc
agcagtctggacccaccagatgtggcagatctgagtcgactggtgcggcggcatgtgccg
gaggccgagtttctggaggccgtgggtcaagagctggtgtacgtgctgccatacacgggc
gccagaaacggcagcttcgcttccctgtttaaagacctggatctggagaaaagcactttg
ggcgtcaccagctacgggatatcagacacaagcctggaggagatctttctgaaggtggct
gaagacacaggtgttgacgtggaatctcatgataagagagaaaatcttgaacaaaagccc
agaagcagctcaaggatatcaggaatacaggctatcagttcagcattggaatccaaagat
gaaaacactgtgaaaaatgatgtgaaggttagattcactagtcgtgtagaggacacccag
cgccccatgtgtgcgaatggcaaagggtcatacgtcatcatgggttggcctctgatcagg
cagcagtttttagctctttttatcaaacgattccaccatggccgtagaagccggagagga
atcattgctcaggttgtgatgccggcattctttgtgtgtctggctctcatcttctctctg
attgttcctccgtttgtggaatatcccaatctggagcttcagccctggatgtacggagct
ccacagaataccttctacagttttgatgatcctggtgtagatcaggtgaagagagtgaca
aatgctctgctcagttcaccgggatttggaacacgttgcatgagcaccaaccccatacct
aaattaccctgtaaccctgcgggaggcactgattggttcactcctgcggtggatccgtcc
gtcagtgagatatttgagaagggtaactggagcatggagaacccgtcgcctgaatgccag
tgcagcacgccgcaaaggagcatcatgctgccggactgcccacctggagccgggggttta
ccaccaccgcagagaactcagaacaccacagacaccctccagaacatcacggcccgaaac
atgaccgacttcctgctcaagagctaccagaaatcaggcaaaatacgatatggaggaata
tctgtaggtggcgtgaactcgcaggtcaaactgaatgagtctgacattacagcagtgatc
agcgacctcaaattattcttcaacatctcacagtataaccagactgaccaaattttccag
gccattcggttggtactattggagataggcaccagagacaatgtgaaggtatggttctat
aatcagggttggcattccatcgtatcgttcctgaatgtggccagtaatggcattctcaga
ggaaacctgccagcgggacgcagagcaggcgactacggcatcacaacattcaaccaccca
cttaatctcactaaagaacagctctcgtttgtagcgctggccacgacctctacggatgtg
gtggtgtcgatttgcgtgatcttcgccatgtccttcatccctgccagctttgtcctcttc
ctcatccaggagcgcgtcagtaaggccaaacacctgcagtttgtgagcggcgtgaatcct
accatctactggctggccaacttcgcctgggacatgtgtaattatgtcatcccatgtatc
atcgtcatcatcatcttcctgtgtttccaacaaaaatcttacgtctctccacccaacctg
cctgcactcatactgctgctggtgctgtacgggtggtccatcactccgatgatgtatccc
gcctccttcctgttcagcgttcccagcacagcgtatgtggttctgacctgcatcaacctc
ttcatcggcatcaacggcagcgtagccacattcatcatggagctctttgacgacccgaat
ataacaaaaatcaatgacatagtgaaacaggttctgctggtgtttcctcatttctgtttg
ggaagaggcctgatggacatggccaaaaaccaggcagtggccaccctctacaaaaacctg
ggcgaagaccgctttgaaaatcctctcaactggaacatggtgggcaagaatctgtttgcc
atgtccattcagggggcagttatgttcgccctgaccctcctcatacagtacaagtttttc
tgcaaatcaatgtcagtaaagtcgctgcctacatcattagagggagaggatgaagatgtg
gctcgtgagcgtgaacgggtgcaccagggcggagctcagaatgacctgctccaaatatgt
gacctcactaaggtgtaccgtaagaagctcactccagccgtggataaagtctgtgtgggt
gttcctgctgcagagtgttttggtttgttggggataaatggtgcaggtaaaactacaact
tttaaaatgctgactggagacatcagcccaacagcaggagatgccttcctaaacggatac
agcatccgcaatgaaatgcagttggtgcagcagaatatgggttactgtccgcagtttgat
gccatagatgaccttctgacaggacgagaacacctggagttctacgctcgactccgaggg
gttccggaaaaggaggtttccatggtggctgagtggggcattcagaagctcggccttgtg
aaatactcagagaaatctgcaggaacgtacagtggcggcaacaagcgcaaactctccact
gccatggctctgattggctgccctcctctggtcttcctggatgagcccaccacgggtatg
gaccccaaggcccgccgttttctgtgggactgtatcctcagtatcattaaggagggtaga
tctgttattctcacctcacacagtatggaggagtgtgaagcgctctgctcacgcatggcc
atcatggtgaatggacagttcaaatgcctgggcagcatccagcaccttaagagcaggttc
ggggaaggttacacactgatcgttcgcgtgtgtgccgatcatgccgacgtgtgcgtggtg
gagtcgtttgtgcgggatacgtttcctggcagcactttgaaagagaaacatcacaacaca
ctgcagtaccagataccgcagggagagggaaccctcgcgcacatcttcagccagctcaac
aaacaccagcagatgctgcaggtggaagattactctgtgtcacagaccacactagaccag
gtttttgtgagtttcgcgcggcagcaacgtgatgaagaggactgcgtgtttgagaacgac
gtggatctgaatgatgaaatacaaacatcaacaacatga
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integrated database retrieval system
