Megalobrama amblycephala (Wuchang bream): 125265876
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Entry
125265876 CDS
T08212
Symbol
sox17
Name
(RefSeq) transcription factor SOX-17
KO
K04495
transcription factor SOX17 (SOX group F)
Organism
mamb
Megalobrama amblycephala (Wuchang bream)
Pathway
mamb04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
mamb00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
125265876 (sox17)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mamb03000
]
125265876 (sox17)
Transcription factors [BR:
mamb03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
125265876 (sox17)
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Gene cluster
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
Sox17_18_mid
HMG_WDHD1
HTH_24
Motif
Other DBs
NCBI-GeneID:
125265876
NCBI-ProteinID:
XP_048042382
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All DBs
Position
LG3:complement(61578327..61582486)
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AA seq
347 aa
AA seq
DB search
MSSPDAGYASDDPSQTRGTSSVMMPGARQCAWVDPLSPPSDSKAKHETPGRAKSEPRIRR
PMNAFMVWAKDERKRLAQQNPDLHNAELSKMLGKSWKALPMVDKRPFVEEAERLRAKHMQ
DHPNYKYRPRRRKQVKRTKRLDSGFLLSGLGDAQALLGMEGVGYSGLPPYSESQSFESYS
LPTPDPSPMDAGATGFSGHLQDSHQQSSCRYHQHFQEHGITYTHTDPNQTQLNQQLYNES
HNNSISHSIFNRSLSSSSSHQAFPSTLDVFSNSQPKRPFEESSFHTHKHALTDPHSQAGA
GQMVDEVEFDQCLIYGVPQAPLQGSELISTVLSDASNAVYYCGYSNS
NT seq
1044 nt
NT seq
+upstream
nt +downstream
nt
atgagcagtcccgatgcgggttacgccagtgacgacccgagccagacccgaggcaccagc
tcagtcatgatgcctggcgcgaggcagtgcgcgtgggtggacccgctcagtccgccctcg
gactccaaagcaaagcacgagactcccgggcgcgcgaagagcgagccgcgcatccgcagg
ccgatgaacgcgttcatggtgtgggcgaaagatgagcgcaagaggctcgcgcagcaaaac
ccggacctgcacaacgcagagctgagtaaaatgcttggtaagtcatggaaagctttacca
atggtggacaaacgtccgtttgtggaggaggccgaacgcctgcgagcgaaacatatgcaa
gaccacccgaactacaaataccggccacggcgtcgcaaacaggtgaagcggacgaagcgt
ctggactccggctttctgctgtcagggctgggcgacgcgcaggcgctcctgggcatggag
ggcgtgggttactcaggactgcctccgtacagcgagagccagtcgttcgagtcctacagc
ctgccgacacccgacccgtctccgatggacgccggggccacggggttttctggccatctt
caggacagtcaccagcagtcatcatgcagataccatcaacacttccaggaacacggcatc
acttacacacacaccgatcccaaccaaacacagctcaatcagcagctttataacgagagt
cacaataactccatctctcacagcatttttaacagaagcctttcttcttcttcttctcat
caagctttcccttcaactttagacgtcttctccaactctcagccgaagcgtccctttgag
gaatcttcctttcatacacacaaacacgccctgactgatccacactcgcaggccggtgcc
ggtcagatggtggatgaggtggagtttgatcagtgtctgatttacggggtccctcaggct
cctctgcaggggtccgagctcatctccaccgtactgtctgacgccagcaacgctgtgtac
tactgcggctacagtaactcctga
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