Megalobrama amblycephala (Wuchang bream): 125266292
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Entry
125266292 CDS
T08212
Name
(RefSeq) E3 ubiquitin-protein ligase RNF43 isoform X1
KO
K15694
E3 ubiquitin-protein ligase RNF43 [EC:
2.3.2.27
]
Organism
mamb
Megalobrama amblycephala (Wuchang bream)
Pathway
mamb04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
mamb00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
125266292
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
mamb04121
]
125266292
Enzymes [BR:
mamb01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
125266292
Ubiquitin system [BR:
mamb04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
125266292
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ZNRF_3_ecto
zf-RING_2
zf-RING_11
zf-C3HC4
zf-C3HC4_2
zf-rbx1
zf-RING_UBOX
zf-RING_5
zf-C3HC4_3
zf-RING_Vps41
FANCL_C
zf-ANAPC11
Prok-RING_1
zf-RING-like
Motif
Other DBs
NCBI-GeneID:
125266292
NCBI-ProteinID:
XP_048042764
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All DBs
Position
LG4:complement(2824199..2963393)
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AA seq
841 aa
AA seq
DB search
MRVPVRRLAGLWPWLLMAALQVALGHTGLELAAAVESERATIKVTLLKQEPTSRTITLEG
VFSWGSAGSAKGKLMQSHPLSLCNTSEDERPETDFITIVKLESPESKVPQCQPLLDKARL
AIQRGAQAVIFDITDDPAAAAAALQDSGSLTRPVVLVKSSDAEELMGLVNKNEEAMVFID
IRVEPKWPPYDVGILLTVALAVLAIIMIFALRFRCRSNRTWDSVHQETMRAISRLETRTY
SSQGCSGSQRSHGAPASNSSSNSSPICAICLEEFMDGQDLRIISCGHEFHKECVDPWLLQ
HRTCPLCMHNIMGKQPQGSDLASRQPQRSRLPPPLQEHSQAFLLPHHYSNQHPYPQHQVP
FSLRHHYPRTPGPLPQLGHFGNSPPLHPRTLRCLTSRPLGASCAYHLAPDSHHGRTHRTA
GHGCRTGGHHYAPPRRSCHRCPVGALRNASGSCVHHLASPANHATHHLPRGGGAHGRQDN
SSCSVGSYHTERSGYLADGPASDSSSGSCHGSSSDSVLNCTDISLQGVYGSWSTFRSSLS
SDYDPFVYYGPGKAPRRGSMEATQRPRSLDSVVNHAGDAGAVCSEEQQQQVAVFSHVHYH
RHRHHYYEDGELNQVPGQGSDEDQGATSSTMAAGGPCNATKNKDSTGCQVQHQSCHCPKT
DLSSRRAEDRAPDPVSSSGASVILPSPTLTSPSPSCCHKGPGWTTRQKAAGCPLEAPSPV
VHFHQSLDLQDDCSIHIHYGQGAGSYCCTPPPDLAPTLLPVPLILDSTGMADWPCCSGAH
VVWQKQVQQAHSEPQLLGPASGMDRPLCRAHHGPGDELSTDICLYCQALHNSQGSEEESG
V
NT seq
2526 nt
NT seq
+upstream
nt +downstream
nt
atgagggttcctgtgcggcgattggccgggctctggccgtggctgctcatggctgccttg
caggtggcgttgggccacacgggcctggaactagccgctgctgtggagtccgaacgagcc
acgatcaaggtgacgctgctgaagcaggagcccaccagcaggaccatcactctggaaggg
gtgttctcctggggcagcgcgggcagcgctaaagggaaactcatgcagtctcacccgttg
tccctgtgtaacaccagtgaagatgagcgtccggaaaccgatttcatcaccatcgtcaaa
ctcgagagcccagagagcaaagtgcctcagtgccaaccgctgctggataaagctcgtctg
gcgattcagagaggagctcaggctgtcatctttgacatcacagatgatccagctgctgct
gctgctgcgctgcaggattctggttcgttgactcgtccggttgtgctggtgaagtcatca
gacgctgaagaactgatgggactcgtcaacaagaacgaagaagccatggtgttcattgac
atcagggtggagccaaaatggcctccctatgacgtcggcatcctgctgaccgtggctctg
gcggtgttggccatcatcatgatctttgctctacgcttccgctgcaggtccaacagaacc
tgggactctgtgcaccaggagaccatgcgtgccatcagcaggttggagacgcgcacgtac
agctctcagggttgctctggatcccagcgttctcacggagctccagcgtcaaacagcagc
tccaattccagcccgatctgtgccatctgtctcgaggaattcatggatggccaggacttg
agaatcatctcctgtggtcatgaatttcataaggagtgtgtcgacccctggctcctacaa
caccgtacatgccctctgtgcatgcacaacatcatgggtaaacagcctcagggttcagat
ctggcgtcccgtcagccccaaaggagtcgactgccgccccctctacaagagcacagtcag
gccttcctccttccccatcactattcaaaccaacacccttacccccagcaccaagtcccc
ttttccctgcggcatcactacccccgcacccctggacctttaccccaactgggtcacttt
ggaaactctccccctcttcatccacgcactctccgttgcttaaccagccgaccattgggt
gctagctgcgcgtaccacctggccccggattcccatcacggacgtacacacagaacagct
gggcacgggtgtcggactggtgggcatcactatgcgccccccagaaggtcgtgtcaccgg
tgccctgtaggagctttacggaacgcttcgggttcttgcgtgcatcatttggcatcgcca
gcaaaccacgcaactcatcacctgccgcgtggcggaggcgcgcatggccgccaagacaac
agcagctgctccgttgggagttaccacacggagcgcagcggttaccttgccgacgggccg
gcgagcgactccagctcaggatcatgccacggctcgtccagcgattccgtcttgaactgt
acggacatcagcctgcagggcgtctatggcagctggtccacttttcgtagctcgctcagc
agtgactatgacccgttcgtctattatggaccgggcaaagccccacgcagagggagcatg
gaggccacgcagaggcctcgttccctggactcggtagtgaaccatgccggtgatgctggt
gcagtttgctcggaagagcagcagcagcaggtggccgtgttcagtcacgtacactatcac
aggcatagacaccactattacgaggacggggaactcaatcaagtgcccggccaaggctct
gatgaggatcagggggccacgtcctcgaccatggcagcaggtggcccctgtaatgcaact
aaaaacaaagactccactgggtgtcaggtacagcaccagtcttgccactgccccaaaacg
gacctcagttcaaggagggctgaggatagagccccggaccccgtatcttcctcaggtgcc
tctgtgatccttccctcccctactttaacctctccgtccccatcctgttgccacaaaggc
ccagggtggaccaccagacagaaagcagccggctgtcccttggaagcaccttcgccggtt
gttcacttccatcaaagcttggaccttcaggatgattgtagcattcatatccactacgga
cagggagcgggaagctactgctgcacacctccaccagatttggcccccacgctgctgccg
gtgcccctgatcttggactcgacgggtatggctgactggccgtgctgtagcggggcacat
gtggtgtggcagaagcaggtgcaacaggcccattcggagcctcagcttctggggcccgct
tctggaatggacagacccctgtgtagggcccatcacggcccaggggacgaactttccacg
gacatctgtctgtactgccaagctctacacaatagtcaggggtcagaggaagagtctggt
gtttga
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