Megalobrama amblycephala (Wuchang bream): 125266369
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Entry
125266369 CDS
T08212
Symbol
zgc:163098
Name
(RefSeq) U2 snRNP-associated SURP motif-containing protein
KO
K12842
U2-associated protein SR140
Organism
mamb
Megalobrama amblycephala (Wuchang bream)
Pathway
mamb03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
mamb00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
125266369 (zgc:163098)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
mamb03041
]
125266369 (zgc:163098)
Spliceosome [BR:
mamb03041
]
Complex A
U2 snRNP components
U2 related factors
125266369 (zgc:163098)
Complex B
125266369 (zgc:163098)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Surp
RRM_1
cwf21
CID
CTK3
RRM_7
SET_assoc
Motif
Other DBs
NCBI-GeneID:
125266369
NCBI-ProteinID:
XP_048042904
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Position
LG4:complement(5202913..5216619)
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AA seq
873 aa
AA seq
DB search
MADKKGKSVGVKRTLTKREQEEMKKKEEEKAAEVFEEFLASFDTNDKSGVKTFVRGGIVN
ATKEEEAAEVKKSKLYRPASKFNSPPQNASPVQPTEVKKAAVKKKTEEKKKSNLELFKEE
LKQIQEEREERYKRKKGDSGGVYPDVDLPLTRRSIFDDDPAVPNTTNLYIGCINPKMTEE
MLCKEFGKYGPLASVKIMWPRTDEERTRVTNRGFVAFMTRKDAERALAALDGKTVMGFEM
KLGWGKAVRIPPQPLYTPIGVLKTTAPPPPSGLPFNAQPRDRFRNDFTKPRSRSQEDFYK
TLSEAVVTVVIPPERNLLGLIHRMIEFVVREGPMFEAIIMSREKNNPDFRFLFDNKSQEH
VYYRWKLYSILQGENPNKWRTSPFRMFRGGSLWKPPLLNPYLHGDEEIEEISFPSQEEEP
KKGHLKAEHRERLEALLRGLTPRRDEIGDAMLFCLERAEAAEEVVSCITESLSIAHTPLQ
KKIARLYLISDILYNSCAKVANASYYRKFFETKLPQIFGDISEAYRNIQARLQAEQFKQR
IMGCFRAWEDWAVYPDSFLIQLQNIFLGLIKPGEEVIEKAEPESPDLDGAPLDGIPLDRV
EIDGTPLDDLDGSPMTWDPSSIDGVPVDDIDGVPLGNSIDDIDGVPFDEGSDKTLPTVAL
SKWEKVEDSESSAKNDSDTEMNSSALKENNGDSDISSDEADSPSRYEGPEFKSSLKNFEL
SESKRTRLRELEVKVMNFQDELESGKRQRKSSMTLQQQVQHYRNRLLQKEFDKDDQEKKD
KYSQKQKDRSKKDERRDKEERSKTRDKEKSRKSEDRERSRGRSRDKDERRERTKSRSPRK
SKRSRSPSPQHKSWRSSSRSPHRSHKKTKKSKH
NT seq
2622 nt
NT seq
+upstream
nt +downstream
nt
atggcagacaaaaaagggaaatcagtgggggtgaagaggacactaacaaaaagagaacaa
gaggaaatgaagaaaaaggaggaggagaaagctgctgaagtctttgaggaatttttagct
tcttttgacactaatgacaaaagtggagtgaagacatttgtacgaggcggcattgtaaat
gcaactaaagaggaagaagccgcagaggtgaagaagagcaaactctacagacccgcctct
aaattcaattctccacctcagaatgcctcacctgttcaacctacagaagttaaaaaagct
gcagttaaaaagaaaacagaggagaagaagaagagtaatctggagctttttaaagaggaa
ttaaaacaaatacaggaggaaagagaggagcgatacaaaagaaagaaaggggactctgga
ggagtgtacccagacgtggatttacctctgacacgaagatcgatatttgatgatgatcct
gctgtgccaaacacaacaaacctgtacattggctgcatcaaccccaagatgacagaggag
atgctttgtaaggagtttggaaaatacggtcctctggctagtgtaaagatcatgtggcct
cgcactgatgaggagagaacaagagtcaccaaccgcggctttgttgctttcatgacacgg
aaagatgcagagcgtgctctggctgcactggacggtaaaacagtaatgggttttgaaatg
aaactgggttgggggaaggcagtacgtattcccccacaacctctctacaccccgatcggg
gtgctgaagaccactgccccccctccaccctctggactgccattcaacgcccaacccaga
gaccgcttcagaaatgacttcaccaaaccacgcagtcgctcacaggaagacttttacaag
actctgtccgaggccgtagtgacagtggtaatccccccagaaaggaacctgctgggcttg
atacacagaatgattgagtttgtggtaagagagggacccatgtttgaagccatcatcatg
agccgggaaaagaacaaccctgacttcaggtttttgtttgataataagagtcaggaacat
gtgtactacagatggaaactctactccattctacagggagaaaacccaaataaatggaga
acgtcccctttcagaatgtttaggggtggctctctttggaagccccctctccttaaccca
tatctccatggtgatgaagaaatagaagagatctccttcccttctcaagaggaagagcca
aagaaagggcacctgaaggcagagcacagagagcggttggaagccctgttgagagggctg
actcctcgcagagatgaaatcggtgatgcaatgctgttctgcctagagagagcggaggct
gctgaggaggtcgtctcctgcatcacagaatctctgtctatagcacacacaccactgcag
aagaagattgccagactttacctgatatccgacatcctctacaactcctgtgccaaagtg
gccaatgcatcatattaccgcaaattttttgagacaaagctgcctcagatatttggagac
atcagtgaagcgtatcggaacatccaggctcgactccaggcagagcagtttaagcaaagg
atcatgggatgttttcgtgcgtgggaggactgggcagtttatccagactccttcctgatc
caattgcagaatatattcctgggactcattaaacctggagaggaagtcattgaaaaagca
gagcccgaatctcctgatctggatggagcgccgttggatggtattcctctagacagagtt
gaaattgatggtacaccccttgatgaccttgatgggtcacctatgacctgggatccatcc
tctatagatggtgtaccagttgacgacattgatggtgttcccctaggaaactcaatagat
gatattgatggtgtgccatttgacgagggctcagataagactttacccactgttgcactg
tccaaatgggagaaggtggaggattcagaatcctcagccaagaatgactcagacacagag
atgaattcaagtgccctaaaggagaacaatggtgattctgatatcagcagtgatgaagct
gacagccccagcaggtacgaggggccagagtttaagagttctctgaaaaactttgagctc
tctgaaagcaaaaggacacgcctccgagaactggaggtgaaggtgatgaatttccaggat
gagctggagtcagggaagcgacagaggaagtccagtatgactcttcaacagcaagttcaa
cactacagaaacagactgctacagaaggagtttgacaaggatgaccaggaaaagaaagac
aaatattcacagaaacagaaagatcggtccaaaaaagacgagcggagagataaagaagag
aggagtaaaacacgggataaagagaaaagtagaaagagtgaggacagagaaaggagtaga
ggaaggagtcgagacaaagatgagaggagagagagaacaaaatctcgatcaccacgtaag
tcaaaacgctctcgatcaccatcaccacagcacaaatcctggaggtcttcgtcccgatca
ccacatcgctcgcacaaaaagaccaagaagagcaaacactga
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