Megalobrama amblycephala (Wuchang bream): 125266467
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Entry
125266467 CDS
T08212
Name
(RefSeq) retinoic acid-induced protein 1
KO
K19749
retinoic acid-induced protein 1
Organism
mamb
Megalobrama amblycephala (Wuchang bream)
Brite
KEGG Orthology (KO) [BR:
mamb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mamb03000
]
125266467
Transcription factors [BR:
mamb03000
]
Eukaryotic type
Zinc finger
Other zinc fingers
125266467
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-HC5HC2H
zf-HC5HC2H_2
Motif
Other DBs
NCBI-GeneID:
125266467
NCBI-ProteinID:
XP_048043118
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All DBs
Position
LG1:27765172..27829286
Genome browser
AA seq
1963 aa
AA seq
DB search
MQSFRERSGFHGNQHCYQQEPQELSRLESYRHHHSQSRQGYEPHSLAAAGMSTAGAGSKD
CYGQQTYPVYTSTSATQTKKPYRGAKTPNQHLQAGYSNHMGPGYTAQYISEGHLQQKWDE
SAQMTQFEQDMVGRLESGVSGSSQYLEQNMLAISQSQCHLPSQSSAPSYTSSHQQGLPPN
PAPSPLMYPQGHLHFPQHSQPPSSSSSSYMEKCNTMPHGYKGYGIPTNAQYGRQLSNHSS
LKQSGYRPQNNYGYQQTPSRPGFEQGSLQGMSGTQENLQKFQHYSQPQQNYCITDISVRS
PDQYYQTCSPSSSHSPARSVGRSPSYNSTPSPLMPNPDSFQYGQPPINPGASSSTGLQDQ
NMLMPPNTHSSPSVNHQSQSYSGSMKERFSEKLLSNPSLWSLNALTSQVENISNNVQQLL
LSEALMANKKTSKRNHPKKGEDYRGQLKGMEESSCPDNQHGPPPSDAYSIPRSMTAELQE
GGYSSSTEDQMDRSYYYFGQEKGQAHTQTHSRLSLDTVSTCSLNSADDVSVRSGDSVRSL
QSVASEDNLNCDPRVQRVLTGEEPNSSLRCIRDERSPISVTAPSPMKQESNSPPDIKRSE
STLKENFEESAWTERMADEEEIGQRKLSADRECKGEVTEKQEKWLEDEKSPSLFHKINKE
VLDESYSYGTEANIYQGLQNKYNLDKGNSEEIDCFSELNHKSNEGTEIKSEHFKSEPQTN
VEMLVKTSPSNSGTDLYLPEKEENSKSENSVDSLTCTEGPVDTLEEQPSVLSHNSTEVRD
EKEDLTTSEEVINNRARPQESFPEVCSTFEEMGNMPQVNTETAESFAQDTPHRGSERRSG
IRDIAPQPHTAKSGFSALNEKTTPLAQARDHHIDRSDAKVLEPDSPQLPGKSILHSAPSW
ADTPPSPKKGDEDMEPGISCPSAVTPSAKPEPLAPSAHTRMFGKKHARGRRRLMHSSVGI
RRQLSVEGDSAPPSAQNPSMPSSKSSLIPDQMETAHQNVSSQTQKLVTESLPSRMCTRSY
GSQSSPKVCPQERRKPGSKPGPKPGSKLGVKPGPKPGPKSNIKPGLKPSPKSISKPGPKP
GPKPEVMPSVKPGPKQSLKCTGSTENAKPGPKPGLKPGPKSGPKSGSKLGSKPGALPEIL
VPKPSQTTTESKPIEGVVPKGPGRPRGITSKIKSIKRDENIQITKDHPKDTHELILQDVN
TALTMDTLVGVVDNTKNETLGSTLESTLASSCVKSLARDQKSMVLRSRKQTREKLTEDKE
QESDKSTETPSAMLIHSQIQNVTVDQSCKTESSNLELPKQKDVSTDSLQQPSEEIVSIKR
KSSLPSLDTKKRKKGVQESRVKTQEPLLDTVTGVCIAKGKRKRGQHLQAESVSTTVTADN
PPTDDISDMPSVPPQCPTKTKYLPPRKGRGLKYEAMVQKITSPGSKKQPLNIQPDIVPDE
STSKPVPQVPELKETINTPEVTHMEGESTISTQETQNTEILTPRKKRRKWATVESSDAPD
VALEAGSLVINTPRLAKQRAIKNNHEMHLKQRKKRRKGIEPQESIPIVEQQEPNQTDILP
PTQPSFSLPETGEQSQHEEPPTELCSPLIKPKRGRRPSLKKKQEELSSQTEDDKVKEKKK
PGPKKKVLNVLKVVVKRPKIKTKCSNDFPPTVKGTLSDLHPALGDGKCSFRPYVHIDSSL
ELASLCTIVNRPEEEQMLSQARKKSAAKMKNLVTVTKAVSDSSVMLQGPLVNKSLIERCL
TCCLCGKPANYRELGDLCGPYYPEDCIPRKMLSSTHRNDFRQNSNCANETEVSCISEQIT
SQSACVKDVYQDANEGHSGHPRRGKRAIREPLRTRPTLRMRFKRLLLLQSRLSGSSPPAG
EEGSGTALQRLQMEAEAKEHWAHEACAVWTTGIILVAGKLFGLKEAVQKAANAKCSRCQG
EGASICCSWKSCNQRYHYVCAKETGCTFQEETFSIKCPKHKAM
NT seq
5892 nt
NT seq
+upstream
nt +downstream
nt
atgcagtccttcagagagcggagtggtttccatggcaaccagcactgctaccagcaggaa
ccccaagaattatcgcgccttgagagttatagacatcatcacagccagtccagacagggc
tatgagccacactctctagctgctgcagggatgtcaacagcaggagcaggttctaaggac
tgttatggacagcagacctatcctgtctacaccagcaccagtgctactcagactaaaaaa
ccttacagaggagccaaaactccaaaccaacacctgcaggctggctacagcaatcacatg
ggccctggatacaccgcccagtatattagtgaaggtcacttgcaacaaaaatgggatgag
tcagctcagatgacccaatttgaacaggacatggtgggacggctagagtctggggtcagt
gggtcatcccagtacctagagcagaacatgctagctatctctcaaagtcagtgccatctc
ccctcccagtcctctgccccatcctatacaagttcccatcaacagggcctcccacccaat
ccagcaccatctcctttaatgtatccacagggccacctccatttccctcagcactcgcaa
cccccttcttcatcttcttcatcttacatggagaaatgtaatacaatgccacatggctac
aaaggctatggtataccaactaatgcccagtatggaagacaactcagcaatcacagcagt
ctaaagcagagtggatacaggcctcagaataattatggttatcaacaaactccctcaaga
cctggatttgaacagggctccctgcaaggaatgtctggtacacaggagaaccttcagaaa
ttccagcactacagtcagccccagcaaaactactgcataacagatatttctgtaaggtca
ccagatcaatactaccagacctgcagtccaagttccagtcattcacctgcaaggtctgtg
ggaagatctccctcatataactctacaccttcccccttaatgccaaatcctgattctttc
cagtatggccaacctcccatcaaccctggggcttcctcgtccacaggtttgcaagaccaa
aatatgctgatgccccctaatacccattcatcacccagtgtgaaccaccagtcccagagc
tattctggctctatgaaagaacgattctcagaaaagctcctgtccaaccccagtttgtgg
agcctcaatgccctgacatctcaggttgaaaacatctccaacaatgttcagcagctactg
ctgtcagaggcccttatggctaacaaaaagaccagcaaacgaaaccatccaaaaaaggga
gaagactatagaggtcagttaaagggtatggaagagtcatcttgtcctgataaccaacat
ggtcctcctccatctgatgcttatagcattcccagatccatgacagcagaactacaggaa
ggaggatactctagcagcacagaggaccagatggacaggagctattactattttggtcaa
gaaaaaggtcaagcacacacccagacacactcacgtctcagccttgacacagtgtccacg
tgttccttaaactcagctgatgatgtatccgtcaggtcaggtgactccgttcgaagtctc
cagagtgtagcctctgaggataatctcaactgtgaccccagagtacagagagttttgact
ggagaggagcccaacagctctctccgttgcattagagatgagaggtctcccatcagtgta
acagctccaagtcctatgaaacaagagagtaattcaccaccagacataaagcgttcagag
agtactctaaaggagaactttgaggagtcagcatggactgagaggatggctgatgaggag
gaaattggacaaagaaaactgtctgcagaccgtgagtgcaaaggagaggtcactgaaaaa
caagagaagtggttggaggatgagaaaagtccttcactttttcataaaataaataaagaa
gtattagacgaaagctactcatatggaacagaagcaaatatctaccaagggctgcaaaac
aaatacaatttagataaaggaaattcagaagagatagactgtttttctgaacttaatcac
aaaagtaatgaaggcacagaaataaagtcagaacatttcaaatcagagccacagactaat
gttgaaatgcttgtgaaaacatcacccagcaattcaggcactgatctgtatttgccagag
aaagaagaaaattcaaagagtgagaattcagtagatagcctcacatgcactgagggacca
gtggacacccttgaggagcagccgtctgtcctttcccataattccactgaggtaagagat
gaaaaggaggatctgacaacctcagaggaggtcattaataatagagcaagaccacaagag
tcctttccagaagtctgcagtacatttgaggagatgggaaacatgccacaagtcaacaca
gaaacagcagaaagctttgcccaggacacaccacacagaggcagtgaaaggaggtcaggc
atacgtgacattgcacctcagcctcacactgccaagagtggcttctcagctctcaatgag
aaaacaacacctttggctcaggctagggatcatcacatcgatcgtagtgatgcaaaggta
ctggagcctgactctcctcagttgccaggcaagtcaatactgcactctgcaccatcttgg
gctgacaccccaccctctcccaagaaaggggatgaggatatggaaccggggattagctgt
cccagtgcagtgactccctcagccaaaccagagcctttggccccatctgcacatacaaga
atgtttggtaagaaacatgcacggggcaggaggagactaatgcattcaagtgtaggaatc
agaaggcagctaagtgtagaaggagacagtgctccaccttctgcccaaaatcccagtatg
ccctccagcaaaagctcccttattcctgatcagatggaaactgcccaccagaatgttagc
agtcaaacacagaagcttgtgacagagagtttaccatcgcgcatgtgcactcgctcctat
ggttcacaaagtagcccaaaggtctgtcctcaagagagaaggaagccaggttcaaagcct
ggtccaaaaccaggttcaaaactaggtgttaagccaggtccaaagcctggtccaaaatca
aatataaaacctggtctaaagcctagtccaaaatcaatttcaaaacctggtccaaaacca
ggtcctaaacctgaagttatgcctagtgtaaaacctggtcccaaacaaagtttaaaatgc
acagggtccacagaaaatgcaaagcctggtccaaaacctggtttaaagccaggtcctaaa
tctggtccaaaatctggttctaaactaggctcaaagcctggggctttaccagaaatactt
gttccaaagccaagtcaaacaaccacagagtcaaaaccaattgagggggtagtgcctaaa
ggtccaggtcgaccaagaggcatcacttctaagataaaatcaataaaaagagatgaaaat
attcagattacaaaagaccatcccaaggacacacatgaacttattttacaagatgtgaac
acagcattaactatggacacacttgtcggtgtggtggacaacactaagaatgaaactttg
ggttccactttggagtctactctagcaagcagttgtgtaaagtctttagcaagagatcaa
aagtccatggtgctgagatcacgaaaacaaacaagagaaaagttgactgaagataaagag
caagagagtgataaatcaactgagacaccttcagcaatgctcatacactcacaaatacag
aatgttactgtggatcagtcatgtaaaactgaatcttcaaatcttgaattacctaagcag
aaggatgtctctacagattcacttcaacaaccgagtgaagagatagtttccatcaaaaga
aaatctagtttaccatcattagacaccaaaaagaggaagaaaggtgtgcaagagagtcga
gtgaagacacaggagcctctattagatacagttacaggagtctgtattgcaaagggaaag
cgaaagagaggacaacatttgcaagcagaatctgtaagcaccactgtaactgctgataac
cctcccactgatgacataagtgacatgccttctgtacctcctcagtgtcccactaaaacc
aagtatttgcctcctcggaaaggcaggggacttaaatatgaggcaatggttcagaaaatc
acatccccagggtccaaaaagcaacctttaaatattcaaccagatattgtaccagacgaa
tcaacatcaaaaccagtgccacaggtaccagagctgaaggagacaataaacacccctgag
gtgactcacatggagggcgaaagcacaataagtactcaagagacccaaaacacagaaatt
ctaactccaaggaaaaagaggagaaagtgggccacggtagagagcagtgatgcaccagat
gtagccctggaggctgggagcctcgttatcaacactccaaggctagccaaacagagagcc
attaaaaacaaccacgagatgcatctaaagcaacgaaagaagagaagaaaaggcattgaa
ccacaagaaagcatccccattgtggagcaacaggagcctaaccagactgatattttgccc
ccaactcaaccctccttctctttaccagaaacaggtgaacagtcacagcatgaggagcca
ccaacagaactgtgctcaccattaataaaaccaaaacgaggcagacggccatcactcaaa
aagaaacaggaagaactctcaagtcaaacagaagatgacaaagtaaaggagaaaaaaaag
cccggccctaaaaaaaaggttctgaatgtcctcaaagttgtagtaaagagacctaagatc
aagacaaaatgcagcaatgatttccccccaacagtgaaggggacattatcagacttgcat
ccagcactaggtgatggcaaatgttctttcagaccatatgtacacattgacagctctttg
gagctagcatctctttgtactatcgtcaacaggcctgaggaagagcagatgctcagccag
gcaagaaaaaagagtgcagctaaaatgaaaaatctagtcacagttaccaaggcagtatca
gactcctcagtaatgctccaggggcccttggttaacaaaagcctaattgaaaggtgtcta
acgtgctgcctatgtggaaagccagcaaattacagggagcttggggacttgtgcggcccc
tattatcccgaggactgcataccacgaaaaatgctgtcttcaacacacagaaatgatttc
aggcaaaacagcaactgtgcaaatgagacagaggtcagctgcatctcagagcagatcacc
tcacagagtgcatgtgtgaaggacgtttatcaagatgcaaatgaaggacatagtgggcat
cccaggagggggaaaagggcaattagggaaccattaagaacccgccccaccttgcgaatg
agatttaaaagactgctgctgttgcagagcagacttagtggatcttctccccctgctggt
gaggagggcagtggaacagctctgcagagattgcagatggaggctgaggcgaaagaacac
tgggctcatgaagcttgtgctgtctggaccacaggcataatcctggtagcaggcaaactc
tttgggctgaaggaggctgttcagaaagctgcaaatgcaaaatgctccaggtgccaaggt
gaaggagcttccatctgctgcagctggaagagctgtaatcagaggtaccattatgtctgc
gccaaagagacgggctgcacgtttcaagaagagaccttctctattaagtgtccgaaacac
aaggcaatgtaa
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integrated database retrieval system
