Megalobrama amblycephala (Wuchang bream): 125266533
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Entry
125266533 CDS
T08212
Symbol
tncb
Name
(RefSeq) tenascin isoform X1
KO
K06252
tenascin
Organism
mamb
Megalobrama amblycephala (Wuchang bream)
Pathway
mamb04510
Focal adhesion
mamb04512
ECM-receptor interaction
mamb04518
Integrin signaling
Brite
KEGG Orthology (KO) [BR:
mamb00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
125266533 (tncb)
04518 Integrin signaling
125266533 (tncb)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
125266533 (tncb)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
mamb00536
]
125266533 (tncb)
Glycosaminoglycan binding proteins [BR:
mamb00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
125266533 (tncb)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EGF_TEN
fn3
EGF_Teneurin
Fibrinogen_C
EGF_Tenascin
EGF_2
DUF7949
Fn3_PBP1
FN3_DSCAM-DSCAML_C
EGF
Fn3_Dep-1_3rd
Pur_ac_phosph_N
Fn3_Dep-1_2nd
EGF_PEAR1L
hEGF
Actin
FN3_Tor_3rd
fn3_2
SPE9_EGF_3rd
Lzipper-MIP1
Motif
Other DBs
NCBI-GeneID:
125266533
NCBI-ProteinID:
XP_048043253
LinkDB
All DBs
Position
LG4:complement(9286337..9386688)
Genome browser
AA seq
1872 aa
AA seq
DB search
MGMRGLLLASVAVAVLVHLSSAGLVKRVIRHRRESLSPATENLTLPSPDQPVVFNHVYNI
NVPSGSLCSVDMDSPGTTEMKPKSEQSDQHIEHTMDGENQIVFTHRINIPKQACGCDNHM
PDMKDLLNRLEMLEAEVSSLREQCTSGTSCCGAQVAGEVTTKPYCSGRGNYSTETCSCLC
EPGWKGVNCSEPECPNFCQDQGRCEDGKCVCFEGFGGEDCSIELCPVDCGENGECIDGAC
LCEEGFIGEDCSLTNCLNNCLGRGRCVDDECVCDEPWTGFDCSELICPNDCFDRGRCDNG
TCYCEEGFTGEDCGELTCPKNCNHRGRCVNGQCVCNIGYSGDDCSKLTCLNDCNQRGHCF
NGKCICDPGFEGEDCSILSCPDNCNDRGQCINGECICDAGYEGDDCSELSCPNNCHDRGR
CVNGKCICKIGFAGEDCSIKTCPNDCHGRGECVDGKCICHDGFAGEHCGIKTCPHHCHGR
GQCVDGKCVCHKGFAGEDCSIKTCPSHCHGHGQCVDGKCICHDGFAGEDCSVKTCPNDCH
GHGQCVDGKCICHDGFAGEDCSIKTCPNDCHGRGQCVDGKCICHDGFAGEDCSIKTCPND
CHDHGQCVDGKCICHDGFAGEDCSIKTCPNDCHDHGQCVDGKCVCHTGFTGHDCSELTCP
NDCHNRGHCVNGQCVCKSGFTGEDCGTKLCPNNCLDRGYCEDGKCVCFEGYTGVDCSVLT
CPANCNDQGQCLNGMCICDLGFTGDDCSEISPPRDLTVTEVDPETVDLTWVNEMLVTEYL
ITYVPTAIGGLEMEMRVSGEKKTATIRDLEPGIEYLISVFAVLNSKMSVPVSARIATHLP
EPEGLKFKSVRETSVEVEWDPLNIPFDSWNLIFRNTKEEDGEILNSLTPPETTFEQSGLG
PGQEYEVKLEVVKNNTRGPPASKNVVTMIDAPSQVDVRDVTDTTALITWFQPVAQVDGIS
VSYAPSTDLDKNTVKLSSMDTQYHLAELYPDTEYEVSLMARRGEMTSFPVYQTFTTDLDA
PKHLKAIEQTDESITLEWKNSIADVLNYRVKYGPLSGGEHGELVFPSGPKDTTRAKITGL
RPGTEYGMGVTSIKEERESLPATTNAVTDLDAPKDLQVSETTETTLTLVWRRPVAKIDTY
ELVLVSADGERTELEVPGAVSTYILSNLNPGMLYTISLTAKRGRKMSVPATLSASTDDEK
PQVGNITISDVSWDSFSVSWELEKGEVEGFLIEVSDPDGLSEGQNHTLSSQEFSLAVTDL
SPSTFYRVTLYGLFKGDLLDPVFAEAITEAEPEVEHLLVSDITPHGFKLTWTAPEGVFDT
FTLKVVDSNGLGQPQQISVSGDKRTEAVTGLIEDTEYEIELFGIILGRKFQPILAVARTG
LGTPKGIRFSDVTDTSATVHWTMPRTHVDSYRVTYVPVQGGSPMTLRVDGGESQAMLPNL
TPGVTYQVTVFAVKGLEESEPGSDRVTTALDKPRGLTAVNITDTEALLLWQPSIATVDGY
VITYSADSVAPVMERVSGNTVEFEISSLTPATLYTVKVYAVREAAKSAATTTEFTTDVDA
PQNLAASNIQTETAMLTWKPPKADISGYILSFESADGVVKEVVLSPTATYYSMSQLTAST
EYTVKLQAIAGPKRSRIISTVFTTIGVLYKHPKDCSQALLNGDTASGLYTIYLRGDENQP
LQVFCDMTTDGGGWIVFVRRQSGKVEFFRNWKNYTAGFGDLNDEFWLGLSNLHKITSSGQ
YELRVDLRDKGESAYAQYDKFSVSEPRTRYKVHVGGYSGTAGDSMTYHHSRPFSTYDHDN
DIAVTNCALSYKGAFWYKNCHRVNIMGRYGDNSHSKGVNWFHWKGHEHSIEFAEMKIRPA
NFRNFEGRRKRS
NT seq
5619 nt
NT seq
+upstream
nt +downstream
nt
atggggatgcgaggtctgctactagcctctgtggcagtagctgttttagttcatctctct
agtgctggcctggttaaaagagtaataagacacagaagagaatcattgtcaccagccact
gagaacttgaccctcccaagtcctgaccagcctgtggttttcaaccatgtgtacaacatc
aacgttccctctggatccctgtgctcggtggacatggattcaccaggaacaacagaaatg
aagccaaaatcggaacaatctgaccagcacatagaacacaccatggacggggagaatcag
attgtttttacacataggattaacattcccaagcaagcttgcggttgtgataaccacatg
cctgacatgaaggacctcctgaacaggctggaaatgctggaagcagaggtatccagtcta
agggagcagtgcactagtggaaccagctgctgtggtgctcaggttgcaggtgaagtcaca
accaaaccctactgcagtggccgtggcaactacagcactgagacctgcagctgtttgtgt
gagcccggttggaagggagtcaactgctctgagccagagtgcccgaacttctgccaggat
caaggccgttgtgaggatggcaagtgtgtctgctttgaaggctttggcggggaggactgc
agtatagagctgtgtcctgtagattgtggtgagaatggagagtgcatcgacggggcttgc
ctctgtgaggagggcttcatcggtgaagactgcagtttaaccaactgcctaaacaactgc
cttggcagagggcgctgtgtggatgacgaatgtgtatgtgacgagccttggacggggttt
gactgctccgagctcatctgtcctaacgactgcttcgaccgtggacgctgtgacaatgga
acatgctattgtgaggagggctttactggggaggactgtggggagcttacctgccccaaa
aactgcaaccaccgtggcaggtgtgtcaatggacagtgtgtctgcaatattggttacagc
ggagacgactgctccaagctcacctgtctcaatgactgcaatcagagaggtcactgcttc
aatgggaagtgcatatgtgaccccgggttcgagggcgaggactgcagcattctctcctgc
ccggataactgcaatgaccgaggacagtgcatcaatggtgagtgtatttgtgatgctggg
tatgaaggtgacgactgctcagagctttcctgccccaataactgccacgatcgtggtcga
tgcgtcaacgggaagtgcatttgcaaaataggctttgctggagaagactgcagcatcaag
acctgtcccaatgactgccatggacgtggagagtgtgtagatggcaagtgcatttgccat
gatggctttgctggagaacattgtggtatcaagacctgcccccatcactgccatggacgt
ggacaatgtgtggatggcaaatgtgtttgccacaaaggctttgctggagaagactgcagc
attaaaacctgtcccagtcactgccatgggcatggacagtgtgtggacggcaagtgtatt
tgccatgatggttttgctggagaagactgcagcgtcaagacctgccccaatgactgccat
gggcatggacagtgtgtggacggcaagtgtatttgccatgatggttttgctggagaagac
tgcagcatcaagacctgccccaatgactgccatgggcgtggacagtgtgtggacggcaag
tgtatttgccatgatggttttgctggagaagactgcagcatcaagacctgccccaatgac
tgccatgaccatggacagtgtgtggacggcaagtgtatttgccatgatggttttgctgga
gaagactgcagcatcaagacctgccccaatgactgccatgaccatggacagtgtgtggac
ggcaagtgtgtttgccacactggctttacaggtcatgactgcagcgagcttacttgcccc
aatgactgccataaccgaggacattgtgtaaatggccagtgcgtgtgtaaaagcgggttc
actggggaggactgtggtacaaagttgtgtcccaacaactgtctggaccgtggctactgt
gaagatggaaagtgtgtctgctttgagggctacactggtgtggactgctctgttctgacc
tgcccagcaaactgtaatgaccaaggccaatgcctgaatggaatgtgcatatgtgattta
ggcttcactggcgacgattgctctgaaatctccccacccagagaccttacagtgactgaa
gtcgacccagaaacagtggacctcacctgggtcaatgagatgcttgtgacggagtatctt
atcacctatgtgcctactgctattggcggtttagagatggaaatgagagtctctggtgaa
aagaagacagccactattagggatcttgagcctggcatagagtacctaatcagtgtcttt
gctgtcctgaacagcaagatgagtgtccccgtcagtgccagaatagccacacatctccct
gaacccgaggggctgaaattcaaatcggttagagagacttcagtagaggttgagtgggat
cccttgaacatcccgtttgatagctggaaccttatcttcagaaacacaaaagaagaggat
ggagagattttgaattctctcacccctcctgagaccacctttgagcagtctggtctagga
cctggacaagagtatgaagttaagcttgaggttgtaaagaacaacacccgtggaccccca
gccagcaagaacgttgtcacaatgattgatgctcccagccaggtggatgtgcgtgatgtg
acggacaccacagctctcatcacctggtttcagcctgtcgctcaggtggatggaatctcc
gtgtcctatgccccaagcacagatttggacaagaacacagtcaagctttcctccatggat
acccagtaccatctggctgaactatatcctgacactgagtatgaggtctctctcatggcc
cgcaggggagagatgaccagctttcctgtctatcagaccttcaccacagacctggatgcc
ccaaagcacctcaaggctattgaacagacagatgagagtataactctggaatggaaaaac
agcatagccgacgtcctcaattaccgtgttaaatacggcccactttctggaggggagcac
ggagaactggtcttccccagcggcccgaaagacaccactcgggctaaaatcactggcctt
aggcccgggactgagtatggaatgggtgtgacgtccattaaggaagagcgtgagagtttg
cctgcaacgaccaatgctgtgactgatcttgatgctcccaaagaccttcaagtaagtgag
accacagagaccacactgacacttgtttggaggaggccggtcgccaaaatcgacacctac
gagctagtgttagtgtccgcggatggcgagagaactgaattggaggtacctggtgctgtc
agtacctacattctgagtaacctgaaccctggcatgctgtacaccatcagcctgactgcc
aagagaggaagaaagatgagtgtgccagccacactgtcagcatccacagatgatgagaag
cctcaggtgggaaacatcaccatctctgatgtgtcctgggatagcttcagtgtgtcctgg
gaactggagaaaggagaggttgagggctttctgattgaagtgtctgacccagatggctta
tctgagggccagaaccacacactatccagccaggagtttagcctggctgtcactgacctc
tcccctagtactttctacagggtcacactgtatgggctgttcaagggagatctcttagat
cctgtctttgctgaagccatcacagaagctgaacctgaagtggaacatcttttggtctcg
gacatcacaccgcacggctttaaactgacatggacagcacccgagggcgtctttgataca
ttcaccctcaaagtcgtcgattctaatggactgggccaaccacagcagattagtgtatct
ggagacaagcgaacagaagcagtgacaggtctcattgaagatacagagtatgaaatcgag
ctctttgggatcattttgggacggaaattccagcccattttggctgtagctcgaacaggt
ctaggtacacccaaggggatacgcttttctgatgtgactgatacatcggcaactgttcac
tggactatgccccgtacccatgtagacagctatcgggtcacctatgtacctgttcagggt
ggcagccctatgacactgagagtagatggaggagagtctcaagccatgctgcctaatctg
acccctggagtgacctaccaggtcactgtctttgctgtgaagggcttggaggagagtgaa
ccaggatctgatagggtcacaacagccctggataagccacgcggtctgacagcagtcaac
atcaccgacaccgaagccctgctgctgtggcagccgtccatcgctactgtggacggatat
gtcatcacttacagtgcagacagtgtggctccagtgatggaaagggtgtctgggaacact
gtggagtttgaaataagctcccttacacccgccaccttatacaccgttaaagtctatgca
gtccgagaagcggccaagagtgctgcaaccaccacagagttcaccacagatgttgatgcc
cctcagaatctggctgccagtaatattcaaacagaaactgccatgttgacatggaagcca
ccaaaagcagacatcagcgggtatatccttagctttgagtctgctgatggcgttgtcaag
gaggttgtcctaagccccacagcaacgtattacagcatgtctcagctgactgcctccaca
gaatacacagtcaaactgcaggccatcgctgggccaaagagaagcagaatcatctctaca
gtcttcaccaccattggagttctgtacaagcatcctaaagactgctcgcaggctctgttg
aatggagacacagcctcaggcttgtacactatttacctgcgtggagatgagaatcagccc
ctgcaggtcttctgcgatatgaccactgatggaggcggctggattgtgtttgtgagacgg
cagagtggtaaagtggagtttttcagaaactggaagaactacactgcaggctttggtgac
ctgaacgatgaattctggctgggtctctctaacctccacaagatcacctcctctgggcag
tatgagctgcgtgtggacctcagagataagggagagtctgcatatgcgcaatatgacaag
ttttcagtctctgaaccacgcactcgctacaaagtccatgttggaggatacagcggcact
gcaggtgactcaatgacatatcatcacagccgtccattctcaacttacgatcatgacaac
gatatagctgtcaccaactgtgcgttgtcttataagggagctttctggtataaaaactgt
catcgagtcaatataatgggccgatacggagacaacagtcacagcaagggtgtaaactgg
ttccactggaagggtcatgagcactccatcgagtttgcagagatgaagatcaggcccgcc
aacttcaggaactttgagggaaggagaaagcgatcgtaa
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