Megalobrama amblycephala (Wuchang bream): 125266654
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Entry
125266654 CDS
T08212
Symbol
farsa
Name
(RefSeq) phenylalanine--tRNA ligase alpha subunit
KO
K01889
phenylalanyl-tRNA synthetase alpha chain [EC:
6.1.1.20
]
Organism
mamb
Megalobrama amblycephala (Wuchang bream)
Pathway
mamb00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
mamb00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
125266654 (farsa)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
mamb01007
]
125266654 (farsa)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mamb03016
]
125266654 (farsa)
Enzymes [BR:
mamb01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.20 phenylalanine---tRNA ligase
125266654 (farsa)
Amino acid related enzymes [BR:
mamb01007
]
Aminoacyl-tRNA synthetase
Class II (U)
125266654 (farsa)
Transfer RNA biogenesis [BR:
mamb03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
125266654 (farsa)
Prokaryotic type
125266654 (farsa)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2d
PheRS_DBD1
PheRS_DBD3
PheRS_DBD2
tRNA_synthFbeta
tRNA-synt_2
tRNA-synt_2b
HTH_11
MarR_2
ARM_FBXO47
Motif
Other DBs
NCBI-GeneID:
125266654
NCBI-ProteinID:
XP_048043479
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All DBs
Position
LG1:complement(28208635..28217397)
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AA seq
497 aa
AA seq
DB search
MADTGLLESLLRLVEKVDGGIDSQDVAVDLGVDHQVIVGAVKSLQALGEVISAEQKSSKH
WELTGEGCEIAEQGSHEARVFNAIPAEGLPQNQLMKMQSGKVGFSKAMSNKWIRLDKAHE
GGPRVFKTVETIEDTVRDKLQLVQKGQSAKLEEKEKNELKKRKLLAEVTVKSYWITKGSS
FSTTITKQETELTPEMIASGSWKEKKFKPYNFEAMGVAPDCGHLHPLMKVRTQFRQIFLE
MGFTEMPTNNFIESSFWNFDSLFQPQQHPARDQHDTFFISDPALAHEFPQDYLERVKKVH
SEGGYGSQGYKYDWKIEEAQKNLLRTHTTAVSARMLYKLAQQEKFTPVKYFSIDRVFRNE
TLDATHLAEFHQIEGVVADYGLTLGNLMGVLHQFFTKLGITKLRFKPAFNPYTEPSMEVF
SYHEGLKKWVEVGNSGVFRPEMLLPMGLPEGVSVIAWGLSLERPTMIKYGINNIRELVGH
KVNLQMVYDSPICRLDS
NT seq
1494 nt
NT seq
+upstream
nt +downstream
nt
atggctgacaccgggcttttggaatcactcttacggctagtggagaaggtagacggcggc
attgacagccaggatgtggccgtggatctcggggtggatcatcaggtgatcgtcggcgcg
gtgaagagcctgcaggcgctgggagaggtgatctcggcagagcagaagtcctccaaacac
tgggagctgacaggagaggggtgtgagatcgcggagcagggcagtcatgaagcccgagtg
ttcaacgccatccctgccgagggtctgccgcagaatcaactcatgaaaatgcagagcggg
aaggttggtttcagcaaagccatgtccaacaaatggatccgtctggataaagctcacgag
ggaggaccaagagtcttcaaaaccgtggaaaccattgaggatacagtaagggacaaacta
cagctggtgcagaagggacagtcggcaaaactagaggagaaagaaaagaatgaactgaag
aaacgtaaactgctagccgaagtgactgttaagtcttactggatcactaaaggaagcagc
ttcagtaccaccatcaccaaacaagagacagaactgactccagagatgatcgccagtggc
agctggaaggagaagaagtttaagccgtataattttgaggcgatgggcgttgctccagac
tgcggccacctgcatccgctcatgaaggtccggacgcagttcaggcagatcttcctggag
atgggattcacggaaatgcccaccaataacttcatcgagagctccttctggaacttcgat
tctctgttccagccccagcagcacccagcaagagaccaacacgacaccttcttcatctct
gacccagcactggctcacgagtttcctcaggactatctggagagagtgaagaaggttcat
tctgaaggaggttatggatcacagggatacaagtatgactggaagattgaagaagctcag
aagaacctcctgagaacgcacaccacggcggtcagcgctcggatgctgtataaactcgca
cagcaggagaagttcacaccagtgaagtacttttccatcgatagagttttccgtaacgaa
actctggacgccacccacctggcggagtttcaccagatcgaaggcgttgtggccgactac
ggcctcaccctgggaaacctcatgggcgtcctgcaccagttctttaccaaactaggaatc
acaaaattgcgtttcaagcctgcgttcaacccctacactgagccaagtatggaagtcttc
agttatcatgaaggtctgaaaaagtgggtggaggtgggtaattctggggtcttcagacct
gagatgctgctgcccatgggtttgcctgaaggggtgtcagtcattgcctggggtctgtcc
ttggagaggcccaccatgatcaagtacggaatcaacaacatccgagagcttgtgggccac
aaagtgaacctacagatggtgtacgacagccctatatgtcgactggactcttaa
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