Megalobrama amblycephala (Wuchang bream): 125266700
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Entry
125266700 CDS
T08212
Symbol
gtf2h2
Name
(RefSeq) general transcription factor IIH subunit 2
KO
K03142
transcription initiation factor TFIIH subunit 2
Organism
mamb
Megalobrama amblycephala (Wuchang bream)
Pathway
mamb03022
Basal transcription factors
mamb03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
mamb00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
125266700 (gtf2h2)
09124 Replication and repair
03420 Nucleotide excision repair
125266700 (gtf2h2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mamb03021
]
125266700 (gtf2h2)
03400 DNA repair and recombination proteins [BR:
mamb03400
]
125266700 (gtf2h2)
Transcription machinery [BR:
mamb03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
125266700 (gtf2h2)
DNA repair and recombination proteins [BR:
mamb03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
125266700 (gtf2h2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ssl1
VWA_2
C1_4
VWA
HscB_4_cys
Motif
Other DBs
NCBI-GeneID:
125266700
NCBI-ProteinID:
XP_048043571
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All DBs
Position
LG4:12344566..12349409
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AA seq
392 aa
AA seq
DB search
MDEEPERTKRWEGGYERTWEVLKEDESGSLKATVEDILFQAKRKRVFESHGQVRLGMMRH
LFVIIDSSRSMEDQDLKPNRLTSTLKLMEYFVEEYFDQNPISQIGIIATKNKRAEKLTDL
AGNPKKHIAALKKAVDSTCVGEPSLYNSLNLAMQTLKHMPAHTSKEILVIFSSLTTCDPA
NIYEIIKTLNGLKIRVSVIGLSAEVRVCTILTRETGGTYNVILDESHFKELLMQHVKPPP
ASSSSECSLIRMGFPQHVIASVSDQDAKPSFSMSHLDSTGEPALTLGGYYCPQCRAKYTE
LPVECKVCGLTLVSAPHLARSFHHLFPLDAFQETPLEEYEGEKFCEACQGELKDKSAFTC
LACKKVFCVECDLFIHDTLHCCPGCMQTDRTS
NT seq
1179 nt
NT seq
+upstream
nt +downstream
nt
atggatgaagaaccagagagaacaaaacgatgggaaggaggatacgaacgaacatgggag
gtgctgaaggaggatgagtctgggtctctcaaagctactgtggaggacattcttttccag
gctaagaggaaaagagtgtttgagagtcatggacaagttcggcttgggatgatgcggcac
ctctttgtgatcattgactcatctagatcaatggaagatcaagacctaaagcccaacagg
ctgacctccaccctaaagctgatggagtactttgtggaggaatactttgaccagaatcca
atcagtcagatcgggatcattgccaccaagaacaagagggcggagaagctcactgatctt
gcagggaaccctaagaagcatatagcagctctgaagaaagctgtggactctacatgtgtt
ggggaaccatccctctacaactccctcaacctggctatgcagactctgaaacacatgcct
gctcatacaagcaaagagatcctggttattttcagcagtctcactacctgtgacccagcc
aacatctatgaaattatcaaaactctgaatggtttgaaaatcagagtgtctgtgatcggc
ctgtcagcagaggttcgagtgtgcaccattctcacaagagaaactggaggaacatacaat
gtgatactggatgagagtcattttaaagagctgctgatgcagcatgtgaagccgcctcct
gccagctcctcctcagagtgctccctcattcgcatgggtttccctcagcatgtcatagca
tcagtgtctgatcaggatgccaaaccctcgttcagcatgtcgcacctagacagcactggt
gagccagcactcactctcggcggctactactgcccacagtgcagagctaaatacactgag
ctgccagtggagtgtaaagtgtgtggtctgactttagtttccgctcctcacttggcccgt
tccttccaccacctcttccccctggacgctttccaggagaccccgctggaggagtatgag
ggagagaagttctgtgaagcttgccaaggagagttgaaagacaaaagtgcgtttacttgt
ctagcatgtaaaaaagtgttctgcgtggagtgtgatctcttcatacatgacacactgcac
tgctgtcccggctgcatgcagaccgacaggacgtcctga
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