Megalobrama amblycephala (Wuchang bream): 125266723
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Entry
125266723 CDS
T08212
Symbol
cacna1ba
Name
(RefSeq) calcium channel, voltage-dependent, N type, alpha 1B subunit, a isoform X1
KO
K04849
voltage-dependent calcium channel N type alpha-1B
Organism
mamb
Megalobrama amblycephala (Wuchang bream)
Pathway
mamb04010
MAPK signaling pathway
mamb04020
Calcium signaling pathway
Brite
KEGG Orthology (KO) [BR:
mamb00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
125266723 (cacna1ba)
04020 Calcium signaling pathway
125266723 (cacna1ba)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
mamb04040
]
125266723 (cacna1ba)
Ion channels [BR:
mamb04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
125266723 (cacna1ba)
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Ion_trans
GPHH
Ca_chan_IQ
PKD_channel
Phage_TAC_15
Motif
Other DBs
NCBI-GeneID:
125266723
NCBI-ProteinID:
XP_048043598
LinkDB
All DBs
Position
LG4:complement(13473434..13605852)
Genome browser
AA seq
2376 aa
AA seq
DB search
MARFEDDLPTRYGGGGSPAGPGRGASRQPGPPGGPRVYKQTMAQRARTMAIYNPIPVKQN
CLTVNRSLFIFSEDNIIRKYAKKITEWPPFEYMILATIIANCIVLGLEQHLPALDKTPMS
KRLDDTEPYFIGIFCFEAGIKIIALGFAFHKGSYLRNGWNVMDFVVVLTGILTIVGPDFD
LRTLRAVRVLRPLKLVSGIPSLQVVLKSIMKAMIPLLQIGLLLFFAILMFAIIGLDFYMG
KFHRTCFRIDNGEQADDFPCGTDEPARICEINVTICREYWTGPNFGITNFDNILFAVLTV
FQCITMEGWVDILYNANDASGNTWNWLYFIPLIIIGSFFMLNLVLGVLSGEFAKERERVE
KRQEFLKLRRQQQIERELTGYLEWICKAEEVMLAEEDKNAEEKEDGAWYKRKCNNPVLKR
AKKSKNDLINAEEGEDHFTDISSVAPQGSPFTRTSVKSSKNESSSYFRRKEKRFRFFIRR
MVKAQSFYWTVLCIVGLNTLCVAIVHYDQPDWLTYALYLAEFVFLGLFLIEMSLKMYGLG
PRTYFHSSFNCFDFGVIVGSIFEVIWAAVKPGASFGISVLRALRLLRIFKVTKYWNSLRN
LVVSLLNSMKSIISLLFLLFLFIVVFALLGMQLFGGQFNFEDETPTTNFDTFPAAILTVF
QILTGEDWNAVMYHGIESQGGVHRGMFCSVYFIVLTLFGNYTLLNVFLAIAVDNLANAQE
LTKDEEEQEEAITKKLALQKAKEVKEVSPISAANISITAFIRPFPGALSCSSSNSSSHSP
SYVCSPAHHYLSKEQQRSLKMMSVWEQRTTQIRKHMLASSEALYQEELNPRLTSNLHLRP
DIKTHLDRPLVVEPRCDGPISPHRGWDKPQDLQGEGGTPEERVAPVIEPPQSHPPRKHHR
HRERPSNETNENGEPGHAKDGRHHVHHSRSKEHDGTRCKEGKSDRSRSREGGRRHHHQSS
VDEGVGGGEREHRHHHSHRHNREGNGVVSAVGKSERRSRQKEGSRSGTREGERCSRGENG
GNGGRRRHRPRTSKAQSTLEGEEQQGNREKEDGKSASHRHMDTGGDSLAINPNQPSVGNR
WCLEKPEDSDNKRNIGQTGGMGTHIPVTITSPPGETTLIPMNSIDSETMPMTEKNLEDLN
QSSPRPILPFSSMFIFSPNNPVRRLCHYIVSLRYFEMCILVVIAMSSIALAAEDPVQANA
PRNNVLKYLDYVFTGVFTFEMVIKMVDLGLLLHPGSYFRDLWNILDFIVVSGALVAFAFS
SFMGSHQSVNRGTKGKDISTIKSLRVLRVLRPLKTIKRLPKLKAVFDCVVNSLKNVLNIL
IVYILFMFIFAVIAVQLFKGKFFYCTDESKGLEKDCRGLFLDYDKDDVAAQPREWRKYEF
HYDNVLWAFLTLFTVSTGEGWPTVLKHSVDATFEDQGPSPGYRIEMSIFYVVYFVVFPFF
FVNIFVALIIITFQEQGDKALSECSLEKNERACIDFAINAKPLTRYMPQNQQSFQYRLWK
FVVSPPFEYSIMIMIALNTVVLMMKFHGAPESYDAMLKYLNIVFTALFSMECVLKIIAFG
PLNYLKDAWNVFDFVTVLGSITDILVSEIKTTDRLLNLSFLRLFRAARLIKLLRQGYTIR
ILLWTFVQSFKALPYVCLLIAMLFFIYAIIGMQVFGNIELNDETAINRHNNFQTFLQALM
LLFRSATGEAWHEIMLSCLSERTCDIQSGTYGKECGSDFAYFYFVSFIFLCSFLMLNLFV
AVIMDNFEYLTRDSSILGPHHLDEFIRVWAEYDPAACGRIKYLDMYEMLLHMSPPLGLGK
KCPPRIAYKRLVKMNMPIADDNSVHFTSTLMALIRTALEIKLASGMVAQRLSDAELKKEL
ATVWPNLSQKTMDLLVTPHKPNELTVGKVYAALMIFDYYKQNRAKRLQLQQQQQREQAGP
GSQNKVSALLEPILPLTHMQDQAMNSVDLASEFQAQTRPSSTTLNNGRTHLDNPIKGSSS
WASEKSKEVQRSKRRPMSRGQSEDASNANTAQESVEMRKMENSANTATSGGLEGQGRAVS
MPKLNAEMQRSQSRHSPGTLLESIPDSPMRRSASTFAPQRPQEVNLNDYILEKPVQERHH
HHHHHHRCHHRRERDKKQRSLDRSPTGQHKATGTAADPVEERPHDRGRSHERKHHSSSAE
KQRYYSCDRYGSREHCPSKSAVASCATSPSEAPEANLNKQGSGWAKGSPVLLTSGASTPS
RGRRQLPQTPLTPRPSVAYRTANSSPVHFLGTQMGLLPPSPGRLSRGLSEHNALLYSGSI
SSSPTPVSRINSEPFLGPPDHPAGLQPEAYSVFQEDPSPQTGRSARTVGMPIVTIPPPPQ
QLFRGVPNGFHFTTGPGTSRGRARQYYREAEVDDWC
NT seq
7131 nt
NT seq
+upstream
nt +downstream
nt
atggctcgcttcgaagacgatctcccgacccggtatggaggcggtggctctccagcgggt
ccaggcagaggggccagccggcagccaggccccccgggcggaccgagggtgtataagcaa
acaatggcccaaagagcccggacaatggccatatacaacccaataccggtcaaacagaac
tgcctcacagtcaaccgatcccttttcatcttcagcgaagataatatcattcggaaatat
gcaaagaaaataacagagtggcctccatttgagtacatgatccttgccaccatcatagca
aactgcattgtactgggcttagagcagcatttaccagctttagacaagacacccatgtca
aagcggctggatgacactgaaccctacttcatcggaatattttgcttcgaggccgggatc
aagattatcgctctaggctttgcttttcataaaggctcctacctccgcaatgggtggaat
gttatggattttgttgttgtgttgacggggattctgaccatagtgggaccagactttgac
ttgcggacactcagggcagtgagagtcttgcggcccctcaaactagtgtctggaattcca
agtctccaagtggttctgaagtccatcatgaaagcgatgattcctctgcttcagatcggc
cttctgctcttctttgctattctcatgtttgccatcattggtctagacttctacatgggc
aagttccaccgcacctgcttcagaatcgataacggggaacaggcggatgattttccatgt
gggactgacgaaccagcccggatctgtgaaatcaacgtaactatatgtagggaatactgg
accggtccaaacttcggcataactaactttgacaacatcctgttcgctgtgctcaccgtc
ttccagtgcatcactatggaaggatgggtggacatcctttacaatgccaacgatgcttca
gggaacacctggaactggctctacttcatcccactcatcatcattggctctttcttcatg
ctcaacttggttctgggggtgctgtcaggagagtttgcaaaggagcgagagcgtgtggag
aaaaggcaggagttcctgaagctgcgaagacaacagcagatagagagggagctgaccggt
tacttggagtggatctgcaaggcagaggaagtcatgcttgctgaagaagataaaaatgca
gaggagaaggaggatggtgcctggtacaagaggaaatgcaacaacccagtattgaagaga
gccaagaagagcaaaaatgacctcattaatgcagaagaaggagaagaccacttcactgac
atctcatcggtcgctccccagggctctccattcacccgtacaagtgtgaagagcagcaag
aatgagagctcgtcatactttcgcagaaaagagaagaggtttcgcttcttcatccggcgt
atggtgaaggcccagagcttctactggaccgttctgtgtatagtgggactgaacacactg
tgtgtggctatagtccactacgaccagcctgactggctcacatatgcactgtatttggca
gagtttgtgttccttggtctgtttctaatagagatgagtctgaagatgtatggcctcggg
ccaaggacctactttcactcctcatttaactgctttgattttggggtgattgtgggtagc
attttcgaggtgatctgggcagccgtaaaaccaggagcctcttttggcattagtgtgttg
cgagcactgcgtttgctgaggatattcaaggttaccaagtattggaactctctgcgtaat
ctggtggtgtctctactcaactcaatgaagtctatcatcagtctcctgtttctgctgttc
ctattcattgtggtgtttgctttgctggggatgcagctctttggaggacagtttaatttt
gaagatgagaccccgacgaccaactttgacacattcccagctgctatcctgacagtgttt
cagattctgacaggagaggactggaatgcagtgatgtatcatggaattgaatcccaggga
ggagtgcaccggggaatgttctgctccgtgtacttcattgtgctcacactgtttggaaac
tacactctcctaaatgtatttttggccattgctgttgataaccttgccaatgcacaagaa
ctcaccaaggatgaggaggagcaggaagaggccatcactaagaaactggctctgcagaaa
gccaaggaggtaaaggaggtcagccccatttcggccgctaacatttccataacagctttt
ataaggccatttcctggtgctctttcatgcagctcctccaactccagctctcattcaccg
agttatgtctgctcccctgcacatcactacttgagtaaagaacagcaacgttctctgaag
atgatgtccgtgtgggagcagcgtaccacccagattcggaagcacatgctggccagcagc
gaggcattgtaccaagaggagctcaacccccggctgacttccaaccttcacctccgccct
gacatcaaaacccatctggaccggcctctggtggtggagcctcgctgcgatggccccatc
agccctcacagaggctgggacaaaccccaggatttgcaaggggagggtggcacgccggag
gaacgtgtcgcccctgtgattgagcctccgcagtcgcatccaccacgcaagcaccatcgt
cacagggagcgtccctccaacgagaccaatgaaaacggcgaacccgggcatgccaaagat
ggccggcatcacgtccatcacagccgcagtaaggagcatgatgggacacggtgtaaggag
gggaagagcgacaggagccggagcagagaggggggtcgccgacatcaccatcagagctcg
gtggatgagggtgtgggaggtggggagagagaacatcgtcaccatcactcccacaggcat
aacagggagggcaatggggtggtcagtgctgttgggaagagtgaacgacggtccaggcag
aaggaaggctcacgatcaggaacaagggagggagagaggtgctccaggggggaaaatgga
ggtaatggagggaggaggcggcacaggccacgaaccagtaaagctcagtctacgctggaa
ggagaggagcaacaagggaatagagagaaggaggatggcaagtcagccagccacaggcac
atggacacgggaggagattcattggctataaatcccaatcagccttcagttgggaaccga
tggtgtcttgagaaaccagaagattctgacaacaagcgaaatattggtcagactggaggg
atgggcacacacatacctgtcaccatcacgtctcccccaggagaaacgactcttattccc
atgaacagtatagacagcgagacaatgcccatgactgagaagaatctggaggatctgaac
cagagcagccctcgccccatcctccctttcagctccatgttcatcttcagtccaaacaat
ccggtgaggcgtctgtgccattacattgtgagtctgcgctactttgagatgtgtatcctg
gtggtcattgccatgagcagtatagccctggctgcagaggacccagtgcaagcaaatgct
cctcgaaacaatgtcctgaagtatttggactatgtcttcactggtgttttcacatttgag
atggtcattaagatggtggatttgggcttattgctgcatcctggttcctacttcagagat
ctgtggaatattctggacttcattgtggtcagtggtgcactggtggcattcgcattctcg
agcttcatgggatcacatcaaagcgttaacagaggaaccaagggcaaagacatcagcact
atcaagtccctgagggtattgcgagtcttgcgacctctgaagaccattaaacgtctacca
aaactgaaggccgtattcgactgtgtggtgaactccctgaagaatgtgttgaatatcctc
attgtctacatcctcttcatgttcatcttcgctgtcattgctgtgcagctcttcaagggc
aagtttttctactgcacagacgagtccaagggcctggagaaagattgcagagggctgttt
ctggattatgataaggatgacgtggcggcccagcctagggagtggaggaaatatgagttc
cactacgacaatgtgctgtgggcgtttctcactcttttcaccgtttctactggagagggg
tggcccacggttttgaagcactctgtagatgccacttttgaggatcagggccccagtcca
ggctaccgcattgagatgtccattttctatgtggtctactttgtggtcttccccttcttc
ttcgtcaacattttcgtggccttgataatcatcacattccaggaacagggtgataaggcc
ttgtcagagtgcagcctggagaagaatgagagagcctgcattgactttgctatcaatgcc
aaaccgctgacccgctatatgccacagaaccagcagtcctttcagtaccgcttgtggaag
tttgtggtctctccaccatttgagtactccatcatgatcatgattgctctcaacactgta
gtgctcatgatgaagttccatggggcacctgaatcttacgatgcaatgctcaagtatctc
aacattgtcttcactgctctcttttcaatggagtgtgttctcaagattattgctttcggc
cccctgaattacctgaaagatgcctggaatgtgtttgactttgtgactgtgctgggcagc
atcaccgacatcttagtctctgagattaaaacaacggaccgtctgctgaacttgagtttc
ctgaggctcttcagggcagccagactaatcaagctcctccggcagggatacaccattcgc
atcctgctctggacattcgtccagtcctttaaggcactgccttatgtatgccttttaatc
gccatgctgtttttcatctacgccatcattggaatgcaggtgtttgggaacattgaattg
aatgacgagactgccatcaatcgtcacaacaactttcaaactttcctccaagcactaatg
ctgttgttcaggagcgccactggtgaagcctggcacgagatcatgctgtcctgtctgagt
gagcgcacctgtgacatacagtcaggcacctatggaaaggagtgcgggagtgactttgcc
tacttctactttgtctccttcattttcctctgctccttcctgatgttgaacctgtttgtg
gctgtcattatggacaactttgaatatctgacacgtgactcctccatcctgggccctcac
cacctggatgagtttatccgtgtgtgggcggagtatgacccagccgcatgtggccgtatc
aagtacctcgatatgtatgagatgctgctccacatgtccccacctttaggtttgggaaag
aaatgccctccacgaatcgcctacaagcggctggtgaaaatgaacatgcccattgcagat
gacaacagtgtacacttcacctctaccctgatggctctgatccgcactgctctggagatc
aaactggcatcaggcatggtggcccaacgtctgtcagacgcagaactgaagaaggaactc
gcaacggtctggccaaacctgtctcagaagactatggacctgctggtcaccccacacaaa
cccaatgagcttacagtggggaaggtgtatgcggctcttatgatctttgactattacaag
cagaacagagccaaaagacttcagttgcagcaacagcaacagagagaacaggcaggacct
ggatctcagaataaagtcagtgctctcttagagcccattctcccactaactcacatgcaa
gaccaggccatgaacagtgtagatttggcctcagagtttcaagctcagacaagacccagc
tccaccacgctcaataacggacgcacgcatcttgacaaccctattaaaggatcttcatcc
tgggcctcagagaagtcaaaggaggtccaacggtctaaacgaaggccaatgtccagaggt
caatcagaggatgcctcaaatgcaaacactgcccaggagtcagtagaaatgagaaagatg
gagaacagtgccaacacagcgacctctggtggccttgagggccaaggacgtgcggtatcc
atgccaaaactaaatgcagagatgcagaggagtcaatcccgtcattctcctgggacttta
ctggaatccattcccgattcccctatgagacgctccgcatccacttttgcaccacagcgc
cctcaggaggtgaatctgaatgactacattttggaaaaaccagttcaagaacgacatcat
caccatcaccatcatcatcggtgccatcatcgcagggaaagagacaagaaacagagatct
ctagacaggtcgcctactggccagcacaaagctacaggcacagcagctgaccctgtagag
gagaggccacatgaccggggtcgttcccatgagaggaagcaccattcgtcttcggcagaa
aagcagcggtattactcatgtgatcgctatggcagtcgggaacactgtcccagcaagtct
gccgtggcaagctgtgccacctcgcccagtgaggcccctgaggccaatctcaacaagcag
ggcagtgggtgggctaaggggagcccggtgttgttgacctcaggggcgagcactccaagc
cgtgggcgcagacagctgccccagaccccccttactcctcgtccctccgtggcctacagg
actgccaactcttcccctgtgcactttctgggcacacagatgggcttgcttcccccaagt
cccggcaggctgagccgcggtctgtccgagcacaacgccctattatacagcggctccatc
tctagctcgccgacccccgtcagtcgcattaactcagaacccttcttgggccccccggac
caccctgccggcctccagcccgaagcctactctgtcttccaagaggatccaagccctcag
acgggccgttctgcccggacagtagggatgccgatcgtgacgattcccccacctccccaa
cagctgttccgcggggttcccaacggattccacttcactacgggccccggaaccagcaga
ggacgggcacggcagtactaccgagaggcagaggtggacgactggtgctag
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