Megalobrama amblycephala (Wuchang bream): 125266963
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Entry
125266963 CDS
T08212
Symbol
chrne
Name
(RefSeq) acetylcholine receptor subunit epsilon isoform X1
KO
K04817
nicotinic acetylcholine receptor epsilon
Organism
mamb
Megalobrama amblycephala (Wuchang bream)
Pathway
mamb04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
mamb00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
125266963 (chrne)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
mamb04040
]
125266963 (chrne)
Ion channels [BR:
mamb04040
]
Ligand-gated channels
Acetylcholine (nicotinic)
125266963 (chrne)
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Motif
Pfam:
Neur_chan_memb
Neur_chan_LBD
Motif
Other DBs
NCBI-GeneID:
125266963
NCBI-ProteinID:
XP_048044082
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Position
LG4:complement(19548225..19566509)
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AA seq
518 aa
AA seq
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MTDRFGRTCVIAFALVVTVLQVSGNEERQLIADKFKNYNKNIRPARNIDEKVKVQVKLTL
TNLISLNEKEETLTTNVWIEIQWHDYRLAWNTSEYHGIDLIRVPYNTVWLPDIVLENNID
GKFDVAYYANVLISSDGSMYWLPPAIYRSTCAIEITYFPFDWQNCTLVFRSQTYSANEID
MVLAEDAETGKPIEWVDIDPEAFTENGEWAIKHRPARKLTDQRYSPDDLEYQEVYFNLII
QRKPLFYIINIILPCSLISSLVVLAFFLPAKAGGQKLTVSISVLLAQTVFLFLIAQKIPE
TSLSVPLIGKYLIFVMCMTTLIVTNCIIVLNFSLRSPSTHNMSQTIKHIFLVVVPRFLGM
ASFVDEEEPGGGVTYEMRERRRSSFGLMQRAEEYVLKQPRSEMMFDKQRERHGLMRSIVD
EIDVSSTANLYKSLAKTAPEIKECVDACNFIAESTKQQNDIGSEMESWVLIGKMIDKLCF
WAAITLFSLGTVAIFLMGHFNQAPEYPFPWENKKYLPE
NT seq
1557 nt
NT seq
+upstream
nt +downstream
nt
atgactgaccggttcggcaggacgtgtgtaattgcgtttgcgctcgtggtcactgtatta
caagtcagtggaaatgaggagaggcagttgattgcagataagtttaagaactacaataaa
aatattcgaccagcaagaaacattgatgaaaaagtgaaggttcaggtcaagttaaccctc
accaacctcatctctttgaatgaaaaagaggagactctcactacaaatgtttggattgag
attcaatggcatgattaccgtcttgcatggaatacatctgaatatcatggcattgatctg
atccgtgtgccatacaacactgtgtggctaccagatatagttttggaaaacaacattgac
ggcaagtttgatgtggcatactacgccaatgtgctgatttcgagtgatggctccatgtac
tggcttccccctgccatctaccgcagtacctgtgccattgagatcacctacttccctttc
gactggcagaactgcacactagtcttcaggtctcagacatacagtgcaaatgaaattgat
atggtattggcagaagatgcagaaacagggaagcctattgagtgggtggacatcgaccct
gaggccttcacagaaaacggggagtgggcaatcaagcaccggcccgcccgtaagctgaca
gaccagcgttactcccctgatgacctggagtaccaggaggtgtatttcaatctcatcatc
cagcggaaaccactcttctacatcatcaacatcatcctgccctgctctctcatctcctca
ctggttgttctggccttttttctacctgcaaaagctggagggcagaagttgaccgtgtcc
atttctgtactgttggctcagactgtgtttctcttcctaattgctcagaagattccagaa
acgtcactttccgtgcctcttattggcaagtatctaatcttcgtcatgtgtatgaccaca
ttgattgtgaccaactgcattattgtcctcaacttctccctccgcagtcctagtacacac
aacatgtcacagaccatcaaacatattttcctcgtggtggtccctcgtttccttggcatg
gcatcatttgtggatgaggaggagccaggtggtggtgtgacgtatgaaatgagggagagg
cgccgcagttcatttgggctgatgcagagggcagaggaatatgttttgaaacagccacgc
agtgagatgatgtttgataaacaaagagagagacatggactcatgcgctcaattgtggat
gaaattgatgtgagcagtacggcaaacctctacaagagtctagcaaagacagcaccagaa
ataaaagagtgtgtggatgcctgtaacttcattgctgaatccactaagcagcagaatgac
atcggatctgagatggagagttgggtgctgattggaaagatgattgacaagctttgtttc
tgggcagccatcacgctattctctcttggaacagtggccatcttcctcatgggtcacttc
aaccaggcacccgagtacccatttccttgggagaacaaaaagtacttacctgagtag
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