Megalobrama amblycephala (Wuchang bream): 125267241
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Entry
125267241 CDS
T08212
Symbol
pdlim5a
Name
(RefSeq) PDZ and LIM domain protein 5a
KO
K19867
PDZ and LIM domain protein 5/6/7
Organism
mamb
Megalobrama amblycephala (Wuchang bream)
Pathway
mamb04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
mamb00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
125267241 (pdlim5a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
mamb04990
]
125267241 (pdlim5a)
Domain-containing proteins not elsewhere classified [BR:
mamb04990
]
LIM domain-containing proteins
PDZ-LIM family proteins
125267241 (pdlim5a)
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GFIT
Motif
Pfam:
LIM
PDZ
DUF4749
PDZ_6
LIM_FHL2-3_N
PDZ_2
Motif
Other DBs
NCBI-GeneID:
125267241
NCBI-ProteinID:
XP_048044648
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Position
LG4:complement(28446113..28507979)
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AA seq
558 aa
AA seq
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MSGKYSVVLQGPAPWGFRLQGGKDFNMPLSISRLSDGGKAAKAGVAVGDLVLSIDGISTD
GMNHLEAQNKIKASTDKLNLALQKASSLPKPAVAPKGHSVEIIKPVPMATSIPSSSDITN
STHITSSSNRGARPFGGAGSPHIAFIPSATSAFALASSAQSPNPLAPPTPTDGSPNHIPA
VPRPSVYNTPINLYSNENACEVAMGQRRGLLESQGESSQLNGKPPVNRLPRKPITETDIE
FYHVPTHGDASRKRIMQDTEDWRPRTGTSQSRSFRILAQITGTESELDQSKEAESAKTTN
EELDDSQPNAHVTCPVKTMTKAPGTPVRNTTGLITPTFGVVSNSTPLGPALDRPMPRPHP
KDEASLVQMAEHIPAGTRTPMCAHCDMVIRGPFLMAMGKSWHPEEFTCAHCSVSLSELGF
VEEQGSVYCQHCYEEFFAPTCARCQYKILGEVINALKQTWHVYCFLCASCQQPIRNDTFH
LEDGEPYCERDYYSLFGTGCRGCDFPIEAGDKFLEALGGTWHDTCFVCSVCSVSLEGQTF
FSKKNKPLCKKHAHTLKI
NT seq
1677 nt
NT seq
+upstream
nt +downstream
nt
atgagtggtaaatacagtgtggtgttacagggtccggccccatggggcttcagactgcag
ggggggaaagacttcaacatgcctctctccatttcacggctctcggatggaggaaaggct
gctaaagcaggagtcgctgtgggagatctggtcctgtccatcgatggcatcagcactgac
ggcatgaaccaccttgaggctcagaataagattaaagccagcacagacaaactcaacctc
gctttacaaaaagcttccagtcttccaaaaccagctgtggcaccaaagggtcattctgtg
gaaattatcaaacccgttcctatggcaacctccattccatcttcctctgacatcacaaac
tccacccacatcacttcatcctccaataggggcgctcgtccatttggaggggcggggtca
ccacacatagccttcattccctctgccacatctgcttttgcactcgcctcctcagctcaa
agccctaatccactggctccgcctactcctaccgatggctcaccaaatcatataccggcg
gtgccccgcccttcagtgtataacacgcccatcaatctctactccaatgagaatgcctgt
gaagttgccatgggccagcggcggggcctgttggaaagccagggtgagagctctcagctg
aatggaaaacctccagttaacagacttcctcgtaagcctatcacagagacagacattgag
ttttaccacgtcccaactcacggtgatgccagcaggaaacgcatcatgcaggacacagag
gattggcgcccgcggacaggaacttcacagtcccgttcattccgtatcctagcccaaatc
accggtactgaatcagaactcgatcagtcaaaggaggctgaatcagcaaagacaacaaat
gaggagctagatgattctcagcccaacgctcatgtcacctgtcctgttaagaccatgacc
aaagccccaggaacacctgtcagaaacacaacaggtctcattactcccacttttggtgtg
gtgagcaacagtacacctttgggccccgccttggaccgacccatgccccgcccacaccca
aaagacgaagcctcattggtccagatggcagaacacatccctgctggaacacgcactcct
atgtgtgctcactgcgacatggttatcagggggccgttcctgatggcgatggggaaatca
tggcacccggaggagttcacatgcgctcactgcagtgtgtctctgagtgagctgggtttt
gtggaggaacagggctccgtctactgccaacactgctacgaagagttctttgctccgacc
tgcgcgcgctgccaatacaaaatcctgggggaagtgatcaatgcacttaagcagacctgg
catgtgtattgtttcctgtgtgcatcctgccagcaaccgataagaaatgatacttttcac
ctcgaggatggagagccgtactgcgagagagattactacagtctgtttgggacgggctgc
cgtggctgtgatttcccaatagaagcaggagacaagtttctagaggccctgggcggcacc
tggcatgacacctgcttcgtgtgctcagtttgcagcgtcagtctggagggccagaccttc
ttctccaaaaagaacaaaccactttgcaagaaacacgctcacactctcaaaatataa
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