Megalobrama amblycephala (Wuchang bream): 125267274
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Entry
125267274 CDS
T08212
Symbol
lrp13
Name
(RefSeq) very low-density lipoprotein receptor isoform X1
KO
K20051
low-density lipoprotein receptor-related protein 4
Organism
mamb
Megalobrama amblycephala (Wuchang bream)
Brite
KEGG Orthology (KO) [BR:
mamb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mamb04131
]
125267274 (lrp13)
Membrane trafficking [BR:
mamb04131
]
Endocytosis
Clathrin-mediated endocytosis
Low-density lipoprotein receptor (LDLR) family proteins
125267274 (lrp13)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ldl_recept_a
Ldl_recept_b
FXa_inhibition
EGF_CA
cEGF
EGF_2
PLDc
Motif
Other DBs
NCBI-GeneID:
125267274
NCBI-ProteinID:
XP_048044703
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All DBs
Position
LG4:complement(29215345..29242368)
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AA seq
1341 aa
AA seq
DB search
MCLFVLLNVASGIFLLLRAEGVLAAVASEHVPLRCRLGFTPCKDGSECVLYSHVCDGEND
CSDGSDEDECASVCSIGQFQCAHGKMCIEQRQVCDGVAQCQDRSDEVDCFKEGCAHRCDK
NRCIPESFICDGDTDCADGSDEASCDVDPDIDEDNIEEEEKTEDEVSENTPVTKGPLRCS
FGSKLCRDGTDCVLYNHVCDGEFDCKDKSDEDECPVRCETGQFQCAHGKKCIEQRQVCDG
VAQCQDRSDEVNCTKEGCAHRCDKNRCIPESFLCDGDADCADGSDEASCGEESCSSAEWR
CGSGQCVSVSMRCDGHPDCKDHSDEEDCTEPPPCSTQRRCPKSQECLLDEWMCDGEMDCK
DGTDERNCKESPVQCGEFQWPCSSNTQCIPQAWRCDGSEDCRDGSDESGCPSVSCPPHLF
QCGSSECVDPSQLCNKVTNCLDGSDEGTSCQTDKCSEQPKCAQDCRSTPSGTRCWCRIGY
KPVDDGLGCVDVDECVDRPDFCSHYCNNTQGSFVCFCSQGYVLEPDGHSCKITGEPYLLM
SVQSEVFLLGLRSSSLDVLLSSEKHFVLSLDYDWQKQRVYWINLNTDNIKWLSLDQKSKG
TIIKGINADSLAMDWVARNLYWADSVNGQINAVGLDSDAAKTTDRVVILGEDLGQLRSIA
LLPQKGIMFWSETGEKAQIERAGMDGSDRRVLVSHSLRWPVSLTVDSIHYRIYWTDEKLK
CIGSANIDGGDIKLLQLMETPSPFSVSVFNDKVYWSDTKRGTIQRAHKTTGKQHQVLLKR
PGQPFGLKVIHALFQVGVSNPCVSQHCSHLCVLAPGLKAVCKCPTQLMLDEDGLTCSKPK
DSSFLLFLSPAAVTQIYLQSRQSGVNLQNWPEHRRLDLPNMNKPTMLDLVLRDLTLYVSD
GSKPVVGLFKMKDTTLVPRGKLLQLHKDSLRVFAVDWITLNVYWSSEKLPGLQVTTPEGT
HTSVLIRDGVGAIESIALDPPSGHLCFSNKVQESQMTRVECAYMNGQNRTVVWSNSVRPT
SLLLTDEGNKLYWADTGLAVIGSVGIDGSGYKEIKTEGSLMAFALVNKVLVWITKKDSTK
CWFSDDEHTGKLWFEVDSEIVSLKAFAKSRQKGTNLCSNGNGGCSHLCLAFPGGMTCHCA
HDHRLVNGKDCSSDPRCPEGTKPCLSEDICLPLEQFCNGVADCPDHSDENCLQDTQHKNV
RINPKSFRPGLSENVIPENVESAACGVTLCNGNGKCVSQDGVTVCVCEAGYGGERCQVAS
GGLSQGPVLYGVVGLAAAVVVLGVTVGIIQKKKATNRRQAAQAVDVQETGMKELERHEPS
SAKPNGKDTELSEENVVTSVD
NT seq
4026 nt
NT seq
+upstream
nt +downstream
nt
atgtgtttatttgtgttgctgaatgtcgcttcagggatctttctgcttctgagagctgaa
ggtgttctggctgcagtggcttctgaacatgttcccctgcgctgcagattgggcttcact
ccctgtaaggatggatcagagtgtgtgctctacagccatgtgtgtgatggagagaatgac
tgttctgacggctccgatgaagatgaatgtgcctctgtctgcagcataggtcagtttcaa
tgtgcacatggtaagatgtgcattgagcaacggcaggtgtgtgacggtgtggctcagtgt
caggatcgatctgatgaagtcgactgctttaaggagggctgcgctcatcgttgtgacaaa
aaccgctgcatcccagaatccttcatctgtgatggagacacggactgtgcggacggcagc
gatgaggccagctgtgatgttgaccctgatatagatgaagacaacattgaggaggaagaa
aagacagaggatgaagtctcagaaaacactcctgtaactaaaggacctctgcgctgttct
ttcggctccaagttatgtagagacgggacggactgtgtgctgtataatcacgtgtgtgac
ggcgagtttgactgtaaggacaagtctgatgaagacgagtgccctgtgcggtgtgaaact
ggtcagtttcaatgtgcacatggtaagaagtgcattgagcaacggcaggtgtgtgacggc
gtggctcagtgtcaggatcgatctgatgaagtcaactgcactaaggagggctgcgctcat
cgttgtgacaaaaaccgctgcatcccagaatccttcctctgtgacggagacgcggactgt
gcggacggcagcgatgaggccagctgtggtgaggagagttgcagcagtgccgagtggcgg
tgcggcagcggtcagtgcgtgtcggtcagcatgcgctgcgatggacatccagactgcaaa
gatcattccgacgaggaggactgcactgaacctccgccatgcagcacgcagcgccgctgt
ccgaagagccaggagtgcctgctggacgagtggatgtgtgacggagagatggactgcaag
gatggcacagatgagaggaactgtaaggagtctccagtgcagtgcggcgagttccagtgg
ccgtgctcctctaacacgcagtgtattcctcaagcctggcgctgtgacggctctgaagac
tgtagggatggaagtgatgaatctggttgtccgagtgtgtcctgtcctcctcacctgttc
cagtgtggtagttcggagtgtgtggacccatctcagctctgtaacaaagttactaactgt
ctggacggttctgatgagggcacgagctgccagacagataaatgctctgaacagccaaag
tgtgcacaggactgtcgcagcacaccttcagggacgcgctgttggtgcaggattggctac
aagcctgtagatgacggtctggggtgtgttgatgtggatgagtgtgtggaccgtccagac
ttctgttcacactactgtaacaacactcagggctcatttgtgtgcttctgtagtcaaggt
tatgttctggagcctgatggtcacagctgcaaaatcacaggtgagccatacctattgatg
tctgtgcagtccgaggtctttctgctgggtctgaggagctccagtctggacgttctcctc
tcgtcagagaagcactttgtcctgtcgcttgactacgactggcagaagcagagagtgtac
tggatcaacctcaacactgacaacataaaatggctgtcactggatcagaagagcaaagga
accatcattaaagggatcaatgcagacagtctggctatggactgggtggcgaggaacctc
tactgggctgacagcgtcaacggccagatcaatgcagtggggctggacagtgatgccgcc
aaaaccacagatcgtgtggtgatcctgggtgaagatcttgggcagcttcgctccatcgct
ctgctgccacagaaaggaataatgttctggtcagaaacgggggaaaaggctcagatagaa
agagcaggaatggacggctcagacaggcgtgtgctggtcagtcactctctccggtggccg
gtcagtctgactgtggactccattcattacagaatctactggacagatgagaaactcaag
tgtataggatcagccaatattgatggaggagatattaagctcttgcagctgatggagacc
cccagtccattctcggtgtctgtattcaatgataaggtctactggtctgataccaaaaga
ggaaccattcagagagctcacaaaaccacgggcaaacagcaccaagtcctgctcaaacgt
cctggacaaccattcggattgaaggtcattcatgctcttttccaagtgggcgtctctaac
ccctgtgtttcccagcactgctctcacctgtgtgttttagcaccagggctgaaggccgtt
tgcaagtgtccaactcagctgatgctggatgaagatggactcacctgctctaaacccaaa
gactcctccttcctgctgtttctttctcctgctgcagtcacacagatttatttacagagc
agacagagtggcgtgaacttacaaaactggcctgaacatcgccgtttagaccttcctaac
atgaacaagccaaccatgttagatttggtgctgcgtgacctgaccctgtatgtgtccgat
ggcagtaagcccgtcgtgggactctttaagatgaaggacaccacgctggtgcctcgtggg
aaacttctccagctacataaagactcactgcgtgtgttcgccgtggactggatcaccctg
aatgtgtactggagcagcgagaagctgcctggcctgcaggtcaccacaccggagggcacg
cacaccagtgtgttaatacgggacggtgtcggagctattgaatccattgctttggaccca
cccagcggacacctctgcttttcaaacaaagtccaggaaagtcagatgaccagggtggag
tgtgcctatatgaatgggcagaacaggacagtggtgtggagtaattcagtccggccaact
tcactgctcttgacggatgaagggaataaactgtactgggccgacactggtcttgcagta
attggttcagttggcattgatggttctggatacaaggaaataaagacagaaggcagcttg
atggcatttgctttggttaataaagtgcttgtttggattactaaaaaagattccactaag
tgttggttcagtgacgatgagcacacggggaagctgtggttcgaagtggactccgagatc
gtcagtctgaaagcattcgcaaagtcgagacaaaaaggcactaatctctgctctaatggt
aatggaggctgcagtcacctctgtcttgcgttccctggaggaatgacgtgccattgtgcc
cacgatcaccgcctggtcaacggcaaagactgcagctcagacccccgctgccctgaaggc
accaaaccatgcctgagtgaagacatctgcctacctctggagcagttctgcaatggtgtc
gcggactgcccagatcattctgatgagaactgtctccaagatacacaacataaaaatgtt
cggatcaatcctaaatcgtttcgtccaggtttgagtgaaaacgtcattccagagaacgtg
gagtctgcggcgtgtggcgttacgctgtgcaacggcaacggtaagtgtgtgagccaggac
ggagtgaccgtgtgtgtctgtgaggcgggttatggtggagagcgctgccaggttgcttcg
ggtggactctcacaggggccggttctgtacggagtagttggactggctgccgctgtggtc
gtcctgggggttaccgtcggcatcattcaaaagaaaaaagccacaaatcggaggcaagca
gcacaagcagtggatgtgcaggaaacaggcatgaaggaactagagagacatgagccgtct
tcagcaaaacctaatggaaaagacacagaattgtcagaggaaaacgtggtaacgtctgtg
gactag
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