Megalobrama amblycephala (Wuchang bream): 125267329
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Entry
125267329 CDS
T08212
Symbol
pole
Name
(RefSeq) DNA polymerase epsilon catalytic subunit A
KO
K02324
DNA polymerase epsilon subunit 1 [EC:
2.7.7.7
]
Organism
mamb
Megalobrama amblycephala (Wuchang bream)
Pathway
mamb03030
DNA replication
mamb03410
Base excision repair
mamb03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
mamb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
125267329 (pole)
03410 Base excision repair
125267329 (pole)
03420 Nucleotide excision repair
125267329 (pole)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mamb03032
]
125267329 (pole)
03400 DNA repair and recombination proteins [BR:
mamb03400
]
125267329 (pole)
Enzymes [BR:
mamb01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
125267329 (pole)
DNA replication proteins [BR:
mamb03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase epsilon complex
125267329 (pole)
DNA repair and recombination proteins [BR:
mamb03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
DNA polymerase epsilon complex
125267329 (pole)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF1744
POL2_thumb
DNA_pol_B_exo1
zf_DPOE_2
zf-DPOE
DNA_pol_B
DNA_pol_B_exo2
RNase_H_2
zf-RRPl_C4
Sigma70_ner
Spidroin_N
CENP-B_dimeris
Motif
Other DBs
NCBI-GeneID:
125267329
NCBI-ProteinID:
XP_048044805
LinkDB
All DBs
Position
LG4:31279581..31309819
Genome browser
AA seq
2285 aa
AA seq
DB search
MVLQNSGRYKSDRGGDQDNQQDDASALSAVKRLERSQFTDGMDERFGFERMKEPGEKTGW
LINMHPTEILDDDKRMISAVDYYFIQEDGNRFKVALPFKPYFYIATKKNCEREVISFLSK
KFQGKVAKLEVVPKEDLDLPNHLVGLKRSYIKLSFNTVDDLVKVKREISPAVRKNREREK
SNDAYTSMLSSALVGGSVVTEDEDGSSKKMTEQLDNILDMREYDVPYHVRVSIDLKIHVA
HWYNVRYRGSAYPPEIVRRDDLVERPDPVVLAFDIETTKLPLKFPDAETDQIMMISYMID
GQGFLITNREIVSEDIEDFEFTPKPEYEGPFTVFNEPDEASLIQRWFEHVHETKPNIFVT
YNGDFFDWPFVEARAAQLGLNMHREIGFQKDNQGEYKASQAIHMDCLRWVKRDSYLPVGS
HNLKAAAKAKLGYDPVELDPEEMCRMATEEPQTLATYSVSDAVATYYLYMKYVHPFIFAL
CTIIPMEPDEVLRKGSGTLCEALLMVQAFHANIVFPNKQEQVFNKLTDDGHVLDSETYVG
GHVEALESGVFRSDIPCRFKMNPAAFDFLIQRVDRTLRHAIEEEEKIPLEQVTNFNEVCD
EIKRKLISLKEVPNRIECPLIYHLDVGAMYPNIILTNRLQPSAMVDEATCAACDFNKPGA
NCQRRMAWQWRGEIMPASRSEFHRIQQQLESEKFPPLFPNGHPRAFHELNREEQARHEKK
RLGDYCRKAYKKVHLTRLEERVTTICQRENSFYVDTVRAFRDRRYEFKGLHKVWKKKLSS
AQESGDAAEVKRCKNMEILYESLQLAHKCILNSFYGYVMRKGARWYSMEMAGIVCFTGAN
IITQARELIEQIGRPLELDTDGIWCVLPNTFPENFVIKSTNEKKSKVTISYPGAMLNIMV
KEGFTNHQYQELVDPASLTYETRAENSIFFEVDGPYLAMILPASKEEGKKLKKRYAVFNE
DGSLAELKGFEVKRRGELQLIKIFQSSVFEAFLKGTTLEEVYASVAKVADYWLDVLYSKA
ANMPDAELFELISENRSMSRKLEDYGEQKSTSISTAKRLAEFLGDQMVKDAGLSCRYVIS
RKPEGSPVTERAIPLAIFQAEESVKKHFLRKWLKMPSLHDLDIRSILDWSYYIERLGSAI
QKIITIPAALQQVKNPVPRVRHPDWLHKKLLEKNDIYKQKKISELFTSEGKRQVAHQTLA
SGETPDMEDFGAPQRPLQPAILISTKRKRISQAEDSQAESQEQELTQSWREILGPPPAMG
ASREEILVWLRYHKKKWELQLRQRKERRKRRRLIDGESQPTGGGVIRDGPTTGLGSFLRR
TARSILDMPWQIVQIAETSHPGLYKLWAVIGSDLHCMKLNIPRVFYVNQRVPKQEEGATC
KKVNRILPRSGVAYYLYQYAVPEDMYQEHINEINADLSAPDIEGVYETQVPLLFRALVQL
GCMCMVNKQVVRDLAGREADTFDLEHLEMRSLAQFSYLEPGSVRHIYLYHHSQGHKALFG
LFIPSQRKASIFVLDTVRSNQMPNLSSLYGAERTALLEKTTEELLPPEKHLFEVRAENDV
KAIYRALQRILLNYKEERRGPTLIAVQSNWELRRLAAGMTVLEEFPVVPVHVIDEISYNV
LDWQRHGARRMIKHYLNLDSCLSQAFDMARYYHLPVGNLPQDISIFGSDLFLARHLRKHN
HLLWLSPTVRPDLGGKEADDSRLVMESDERGSMEINSQGCYSTVCVELDIQSLAVNTILQ
SQHVNDMEGGASMGVSFDVIQHASLEEMMSGNQGANAVASYDETALCSNTFRILKSMVVG
WVREITQYHNVYADNQVMHFYRWLRSPSSLLYDPALHRTLLNMMKKIFLQLVAEFKRLGS
SVIYGNFNRLILCTKKRRIDDAIAYVEYITNSIHSKEIFHSLSITFSRCWEFLLWMDPAN
CGGVKGKLPSSLLYGEHGNEKKTKKDGAEEAGSEDEEEDEENQGEDEEQDGEEDVEDLIE
SNWNIMQYLPQTASCQKYFLMIISAYIAAVYHSMRQELRRNAPGATPIKRRGATQASQQP
TGDVSALPGLITFSQEYVSSELTQNFFTITQKIQKKVSSTRSVTLPSEMFPVLPGSHLLL
NNPALEFIKYVCQVLSLDANIVNQVNKLKRDLLRLVDVGEFSEDAQFRDPCKSYVLPEVI
CHHCNFCRDLDLCKDPAVSQDGSVLPQWFCSNCQAQYDTESIEMALVEALQKKLMSYTLQ
DLECAKCKGVKEANMPLYCSCAGDFNLSFTTKSFSEQVEVFRNIAAHYNMSFLLETIDWV
LSMNA
NT seq
6858 nt
NT seq
+upstream
nt +downstream
nt
atggttttacaaaacagtggccgatataaatcagaccgaggtggggatcaggacaaccaa
caggatgatgcatctgctttgtcagctgtcaagcggctggagcgcagtcagttcaccgat
gggatggacgagcgctttggctttgaacggatgaaggaacctggtgagaaaacgggatgg
ctgatcaacatgcacccgactgagattctggatgatgataagcggatgatcagtgctgtg
gactattacttcatacaggaagatggaaacagattcaaggttgctcttccctttaagccg
tatttctacatagccactaaaaagaactgtgaaagagaggttatctccttcctgtcaaag
aagtttcaagggaaagtggcgaagcttgaagttgtcccaaaggaagatttagatctgcct
aatcaccttgttggcctgaagaggagctacatcaaactctcttttaacactgtggatgac
cttgttaaagtgaaaagggagatctcacctgctgttcgcaagaacagagagagagagaag
tccaatgacgcctatacaagcatgttatccagtgctttggttggtgggagtgtagtgacg
gaggatgaggatggttcgtcgaagaagatgactgagcaacttgacaacattttagacatg
cgagaatatgacgtgccctatcacgtccgtgtttctattgacctgaagattcatgtggct
cactggtataatgtgcggtacagaggaagtgcctatcctcctgagattgtgcgcagggat
gatcttgtggaaagacctgatcctgtagtgttggcgtttgatattgagaccactaaactc
cctctgaagtttcctgatgctgaaacggaccagattatgatgatatcgtacatgatagat
gggcagggcttcctcatcacaaacagagaaattgtctctgaggacattgaagactttgag
ttcacccctaaacctgaatatgagggccctttcactgtatttaatgaacctgatgaggcc
tctctcattcagagatggtttgaacatgtccatgagaccaagccaaacatttttgtcact
tacaacggagatttctttgactggccatttgtagaggccagggcggcccagcttggcctg
aatatgcatcgggagatcggcttccagaaggacaatcagggagaatataaagccagccaa
gctattcacatggactgcctcaggtgggtaaagagagacagttacctgcctgtaggaagt
cacaacctcaaggctgcagcaaaagctaagttaggctatgaccctgtagagctggaccca
gaggagatgtgccgtatggctactgaagaaccacagactctggccacctattcagtgtct
gacgctgtggccacatactacctttacatgaaatatgttcatcccttcatttttgccctc
tgcaccattattcctatggaacccgatgaggttttgcggaaaggctcagggaccctgtgt
gaagccttgctgatggttcaggccttccatgccaacattgtcttcccaaacaagcaggag
caggtctttaacaaactcacagatgacggtcatgtactcgactctgagacttatgtgggc
ggtcacgtcgaggctctggagtctggtgtgtttcgcagtgacatcccctgtcgctttaaa
atgaatccagcagcatttgactttttgattcagagggtagaccgtactcttcgtcatgcg
attgaggaagaggagaagattccccttgagcaggtcaccaactttaatgaggtgtgtgat
gagatcaaaaggaagctgatctctctgaaggaagtacccaatagaattgagtgtcctctt
atttaccatctggatgtgggggctatgtaccccaacatcatcctcaccaacagactacag
ccctctgccatggtggatgaggcaacctgtgccgcctgtgattttaataaacctggtgca
aactgtcagcgcaggatggcatggcagtggagaggagagatcatgccggccagtaggagt
gagtttcatcgcattcagcaacaactggagtcagagaagtttcctcctctctttccaaac
ggtcatcctcgcgctttccatgagctcaatagagaagaacaggctcgtcatgagaagaag
cgcttgggagactactgtagaaaagcctataagaaggttcacctgaccagactagaggag
agagtcactaccatttgccagagagagaactccttttatgttgacacggtccgagccttc
agagaccgtcgatatgagttcaagggactccacaaggtgtggaagaagaagctgtcttca
gcacaggaaagcggggatgcagcagaggtgaagcgctgcaagaacatggagattctctat
gagtctctgcaactggcgcacaagtgcatcctcaactccttctatggatacgtcatgaga
aaaggagcacgatggtactcgatggagatggctgggattgtgtgtttcactggtgccaac
atcatcacacaggccagagagctcattgagcagatcgggaggcctctggagttggacact
gatggtatctggtgtgttcttcccaacacttttcctgagaactttgttataaagtccacc
aatgagaagaagtcaaaggtgaccatcagttatccaggagccatgctcaatatcatggtc
aaggagggcttcacgaatcatcagtatcaagagctggtagaccctgcatctctaacatat
gagaccagagctgagaacagcatcttctttgaagtggatgggccgtacttggctatgatc
ctgcccgcctccaaagaagaaggaaagaagctaaagaagaggtatgccgtgtttaacgag
gatgggtctttggctgagctgaagggatttgaggtgaagaggagaggagaacttcaactc
attaagatcttccagtcatctgtgtttgaggccttcctgaaaggcacgactctagaggag
gtttatgcctctgtggctaaagtggctgactactggcttgatgtgctctacagcaaggct
gctaacatgccagatgctgagttgtttgagctgatttcagaaaaccgctcaatgtcccgt
aaactggaagactacggagaacagaaatccacctccatcagcacggccaagcgtcttgct
gagttccttggtgatcagatggtgaaggacgctggcctcagctgtcgctatgtcatctcc
cgcaaaccggagggctcgcccgtcactgaaagggcgatccctctggccattttccaggcc
gaagagagtgttaaaaagcatttcctacgtaaatggctgaagatgcctagcctccatgac
cttgacattagatctattctggactggagttactacattgagcgtttgggcagtgctata
cagaagatcatcactattcctgcagctctacaacaggtgaaaaacccagtacccagagta
cgacatccagactggctgcataagaagcttctggaaaaaaatgacatctacaagcagaag
aagattagtgagctctttaccagtgagggaaagagacaggtggcccatcaaactctagca
tcaggtgagactcctgatatggaggatttcggtgctcctcagcgccccttgcagcctgcc
atactcatcagcacaaagaggaagaggatatctcaggcagaggacagccaggccgagtct
caagagcaagaactcacacagtcttggagagaaatactggggccaccgccagccatgggc
gcctctcgggaggaaattcttgtctggttgcgctaccacaagaaaaaatgggagctgcag
cttcgccagaggaaggaacgccgaaagcgacgacgtttgattgacggggaatctcagccg
acagggggcggtgtaatccgtgatggaccgacaacagggctaggcagcttcttgcggaga
actgcccgcagtattctggacatgccctggcaaattgtacagattgcagagaccagtcac
ccaggtctttataagctgtgggcggtcattggcagtgacttgcactgcatgaagctcaac
atcccacgagtgttttatgtcaatcagagagtgcctaagcaagaagagggggctacctgc
aaaaaggtgaaccggatacttccacgctctggtgtggcgtattacctgtaccagtatgca
gttcctgaggacatgtaccaagaacacatcaatgagatcaatgctgacctttctgctcct
gatattgagggtgtctatgagacacaggttccgctgctgttccgggctctggtccagctg
ggctgcatgtgtatggtcaataaacaggtggtcagagacctggctggcagagaggctgat
acctttgacctggaacacctagagatgagatccttggcccagttcagctaccttgagcca
ggcagtgtaaggcacatttacctgtaccatcacagtcagggccataaggctctctttggc
ctcttcataccgtcccaacgcaaagccagcatctttgttctcgacacggtacgcagtaat
cagatgccaaacctgagttcgttgtacggagcagagcgcacagcactgctggagaagacc
acagaggagcttctgccacctgagaaacatctgtttgaagtgcgtgctgaaaatgacgtc
aaagcaatctaccgtgcactgcagcgcattcttctcaactacaaggaggagcggcgtggt
ccgaccctgatcgctgttcagtctaactgggagctgcggcgtctggcggccggcatgact
gtactggaggagttcccggtggtgccggttcacgttattgatgagataagctacaatgta
ctggactggcaacggcacggagctcgccgcatgatcaaacactacctgaacctggacagc
tgcctctcacaggcttttgatatggccaggtattatcaccttcccgtgggaaacctgcct
caggatatttctatatttggatcggatctatttcttgcacgtcatctcagaaagcacaac
cacctgttgtggctgtcacctacggtacggccagaccttggggggaaagaggctgacgac
agcagactggtgatggagagtgatgagagaggctccatggagatcaacagccagggctgc
tactccacagtttgcgtggagttggatattcagagtttggcggtgaacaccattctgcag
tcccagcatgttaacgacatggaaggcggggctagcatgggcgtcagttttgatgtcatt
cagcatgcatcactggaggaaatgatgtcagggaatcagggggcaaacgcagtggccagc
tatgatgagaccgcgctctgctccaacacattcaggattctgaagagtatggttgttggc
tgggttcgagagatcacacagtatcataacgtctatgctgataaccaggtgatgcatttt
tatcggtggttgcgatcacccagttctctgctgtacgacccggccctgcaccgcaccctc
ctcaacatgatgaagaagatcttcctacaacttgtggcagagtttaagcgcctgggatca
tctgtgatctacggaaacttcaaccgtctcatcctctgcaccaagaaacgacgtattgat
gatgccattgcatacgtggagtatatcactaacagtatccattcaaaggagatcttccac
tctctgtccatcacattctcacgctgttgggagtttctgctgtggatggatcctgctaac
tgtggaggagtgaagggaaagctgccctctagccttctgtatggagagcatggcaatgaa
aagaagacaaagaaggatggagcagaggaggctggaagtgaggatgaggaggaagatgaa
gaaaaccaaggggaggatgaagaacaggatggggaagaagatgtggaagacctgattgaa
agtaactggaacatcatgcagtaccttcctcagacggcatcctgtcagaaatactttctt
atgatcatttcagcctacattgcagctgtctatcacagcatgagacaagagcttcggcgg
aacgcccctggtgctactcccattaagagacgaggagcgacccaagcatcccagcagcca
actggggatgtcagtgcacttcctggtttgattacgttctcccaggagtacgtgtcaagt
gaactcacacagaactttttcaccatcactcagaagattcagaagaaagtgtcgagcact
cgcagtgttacactcccttcagagatgtttcctgttcttcctggttctcacttgctcctc
aataaccctgctctggagtttattaaatatgtctgccaggtgctctctctggacgccaac
attgtcaatcaggtgaacaaactgaagcgagatcttttgcgattggtggatgttggagaa
ttctcagaggacgcccagttccgtgacccctgcaagtcctatgtcctgccagaggtcatc
tgccaccactgtaacttctgtcgtgaccttgacctctgcaaagaccctgcggtttcccag
gatggttcagttcttcctcagtggttctgttcgaactgtcaggcccagtacgacacggag
tctatagaaatggccctggtggaggcactccagaagaaactcatgagttacaccctacaa
gacctggaatgtgccaaatgcaaaggagtgaaggaagcaaatatgccgctgtactgtagc
tgtgctggagatttcaacctcagcttcaccacaaagagcttctctgagcaggtggaagtg
ttccggaacattgccgcccactataatatgagcttcctgctagagaccattgactgggtc
cttagtatgaacgcatag
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integrated database retrieval system
