Megalobrama amblycephala (Wuchang bream): 125267335
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Entry
125267335 CDS
T08212
Symbol
ppil2
Name
(RefSeq) RING-type E3 ubiquitin-protein ligase PPIL2
KO
K10598
peptidyl-prolyl cis-trans isomerase-like 2 [EC:
5.2.1.8
]
Organism
mamb
Megalobrama amblycephala (Wuchang bream)
Pathway
mamb04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
mamb00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
125267335 (ppil2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
mamb03041
]
125267335 (ppil2)
03110 Chaperones and folding catalysts [BR:
mamb03110
]
125267335 (ppil2)
04121 Ubiquitin system [BR:
mamb04121
]
125267335 (ppil2)
Enzymes [BR:
mamb01000
]
5. Isomerases
5.2 cis-trans-Isomerases
5.2.1 cis-trans Isomerases (only sub-subclass identified to date)
5.2.1.8 peptidylprolyl isomerase
125267335 (ppil2)
Spliceosome [BR:
mamb03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
125267335 (ppil2)
Complex C
U4/U6.U5 tri-SnRNP related factors
125267335 (ppil2)
Other splicing related proteins
Minor spliceosome components
Minor spliceosome associated proteins
125267335 (ppil2)
Chaperones and folding catalysts [BR:
mamb03110
]
Protein folding catalysts
Peptidyl prolyl isomerase
Cyclophilin
125267335 (ppil2)
Ubiquitin system [BR:
mamb04121
]
Ubiquitin ligases (E3)
U-box type E3
125267335 (ppil2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pro_isomerase
Rtf2
zf-NOSIP
U-box
eIF3_N
Motif
Other DBs
NCBI-GeneID:
125267335
NCBI-ProteinID:
XP_048044819
LinkDB
All DBs
Position
LG4:31358120..31397941
Genome browser
AA seq
524 aa
AA seq
DB search
MGKRQHQKDKMYITCAEYTQFYGGKKSEIPRDNFRRLPFDHCSLSLQPFEYPMCTVDGVV
FDLMSIVPWIKKFGTNPITGEKLEAKSLIKLNFCKNNEGKYHCPVLYTVFTNNSHIVANK
VTGNVFSYEAVDQLNIKTKSYKDLLTDEPFTRQDLITLQDPTNLDKFNVSNFFHVKNNMK
VLDPDEEKAKQDPSYHLKSTNLETRETLAELYRDYKGDELLASTMKEKETKKTDKFNAAH
YSTGRVSASFTSTAMAPATTHEADAIADDAVRYQYVKKKGYVRLHTNKGDLNVELHCDKV
PKAGENFIKLCKKGYYDGTIFHRSIRNFMIQGGDPTGTGTGGESFWGKPFKDEFRPNLSH
TGRGILSMANSGPNTNKSQFFITFRSCAYLDRKHTVFGRVVGGLEALTAMENVESDPKTD
KPKSEIKLLSATVFVDPYEEADAQIAAEREKEAQKQEEERAQTSASVNKAKTEDKPKIFK
PGVGKYINMVATKHSHPDSDKPSTSEAPAKKPKGRTGFGDFSSW
NT seq
1575 nt
NT seq
+upstream
nt +downstream
nt
atggggaaacgacagcatcaaaaagataagatgtacatcacatgtgcagaatacacccag
ttttatggagggaagaaatcagaaatcccacgagacaatttcagacgtctgccctttgat
cattgcagtttgtctcttcagcccttcgagtatcctatgtgcacagtggatggtgtggtt
tttgacctaatgagcatagtgccttggattaagaagtttggtaccaaccccataactgga
gagaagcttgaggctaaatctctcatcaagcttaacttctgcaaaaacaatgaagggaag
taccactgtcctgttctctacacagtgttcacaaacaactcccacattgttgccaacaaa
gtcacagggaatgttttctcttatgaggcagtagatcagctcaacatcaagacaaagagt
tataaagacctgctgacggatgaaccattcacccgccaggatctcatcacactacaggat
cctacaaatctggataaattcaatgtctccaacttcttccatgtgaaaaacaatatgaaa
gtcctcgaccctgatgaagagaaagccaaacaggacccatcataccatctgaaaagcaca
aacctggagacacgagaaaccctggcggagctctatagggactataaaggagatgagctg
ttggcttccactatgaaagagaaagaaaccaaaaaaacagacaagttcaatgctgctcac
tattccactggaagagtgtctgcctccttcacatctacagctatggctccagccaccacc
catgaagcagatgctattgcagatgatgccgttcgctaccagtacgttaagaagaaaggc
tacgtgcgcctacacacaaataaaggagacctgaatgtggagttacactgtgataaggtc
cccaaggctggagaaaattttattaaactgtgtaagaaaggatattatgatggcacaata
ttccaccgctctattcgaaatttcatgattcaaggaggagaccctacagggacgggtaca
ggaggcgagtctttttggggaaagccattcaaggatgaattcaggcctaatctgtctcac
acgggtcgtggtattctgagcatggctaactcaggacccaacacaaataaatcccagttc
tttataacattccgctcgtgcgcatacctggacaggaaacacactgtgtttggaagagtg
gttggtggtttagaggctctcacagcgatggagaatgttgaaagtgatccaaagacagac
aaacccaagtctgagataaagttgctgagcgctacagtgtttgtggacccgtatgaggaa
gccgatgcacagattgcagccgagcgagagaaggaagcacagaaacaggaggaagagaga
gcgcaaacttctgcttcagtcaacaaggcaaaaacagaggacaagcctaaaatcttcaaa
ccaggagtgggcaaatacatcaacatggttgccacgaaacattcccacccagatagtgac
aaaccctccaccagtgaagctcctgccaagaaacccaaaggcagaacaggttttggagac
ttcagttcctggtag
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