Megalobrama amblycephala (Wuchang bream): 125267526
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Entry
125267526 CDS
T08212
Symbol
thbs4a
Name
(RefSeq) thrombospondin-4a
KO
K04659
thrombospondin 2/3/4/5
Organism
mamb
Megalobrama amblycephala (Wuchang bream)
Pathway
mamb04145
Phagosome
mamb04510
Focal adhesion
mamb04512
ECM-receptor interaction
mamb04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
mamb00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
125267526 (thbs4a)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
125267526 (thbs4a)
09144 Cellular community - eukaryotes
04510 Focal adhesion
125267526 (thbs4a)
09142 Cell motility
04820 Cytoskeleton in muscle cells
125267526 (thbs4a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mamb04131
]
125267526 (thbs4a)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
mamb04147
]
125267526 (thbs4a)
00536 Glycosaminoglycan binding proteins [BR:
mamb00536
]
125267526 (thbs4a)
Membrane trafficking [BR:
mamb04131
]
Endocytosis
Phagocytosis
Opsonins
125267526 (thbs4a)
Exosome [BR:
mamb04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
125267526 (thbs4a)
Exosomal proteins of colorectal cancer cells
125267526 (thbs4a)
Exosomal proteins of bladder cancer cells
125267526 (thbs4a)
Glycosaminoglycan binding proteins [BR:
mamb00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
125267526 (thbs4a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TSP_C
TSP_3
EGF_3
EGF_CA
COMP
EGF
EGF_MSP1_1
cEGF
Motif
Other DBs
NCBI-GeneID:
125267526
NCBI-ProteinID:
XP_048045205
LinkDB
All DBs
Position
LG4:39757553..39770976
Genome browser
AA seq
947 aa
AA seq
DB search
MGIWTRIIFSLQLILQLLDTVKTQGIVYDLLVSPDCLPDLLQGGIRAKNMDNVFILASLK
LQNKAPTRVFRIFNAADNTDYFDFTVQGKLNKVILKYLKSNGKVGTANFGKVTMTDGQQH
HILLHFSGLQQGTPTTALYVDCRLVERVQDVPLAFKSLPEGPKRVTLKTLPTSSQDKLSD
LRLVLDESIDNVVELQDCSGSELSEERETLQLLGTTSKMEAGPMFELMRMIQELKQKVDQ
QTKETADLKKIILECVPCSVGPDHAALQNKNQSKCKPGVCFTPAMCIETAEGVDCAPCPE
GYTGDGVRCDDVDECQFNPCFSGVRCINTAPGFRCEKCPQGFSGLEIQGVGIHYAQANKQ
ICNDIDECQVDNGGCTPNSYCHNTVGAFHCGNCKTGFKGDQNTGCKSTGLGPAPVSDRLC
GNGQPNPCDINAECIVERDGSTSCVCQIGWAGNGYVCGKDTDIDAYPDNKLQCRDGTCKK
DNCMFVPNSGQEDADRDGKGDACDVDADSDGIYNDQDNCWLVPNIDQKNSDKDLHGDACD
NCINVENPDQRDTDKDGLGDACDDDIDGDGLKNILDNCQRVPNPDQKDKDNDGVGDACDS
CPEMPNPNQSDVDDDLVGDTCDTNIDSDGDGHQNTKDNCPNVINSSQLDTDKDGLGDECD
DDDDNDGILDDKDNCRLVANPDQKDENNDGVGDACTGDFDKDHVIDIIDTCPENAEITLT
DFRAYQTVVLDPEGEAQIDPNWVVLNQGMEIVQTMNSDPGLAVGYTAFSGVDFEGTFHVN
TVTDDDYAGFIFGYQDSSSFYVVMWKQTEQTYWQAVPFRAVAEPGIQLKVVKSKTGPGEF
LRNSLWHTGDTNDQVRLLWKDPRNVGWKDKVSYRWNLKHRPQVGYIRVRFYEGTDLVADS
GVIIDTSMRGGRLGVFCFSQENIIWSNLKYRCNDTIPEDFTEEQAQQ
NT seq
2844 nt
NT seq
+upstream
nt +downstream
nt
atgggtatttggacaagaatcatattcagtttacagttaattttacaactccttgacaca
gtgaaaactcaaggaattgtttatgatcttctggtgtcaccggattgcttacctgacctt
ctgcaaggaggaataagggcaaagaatatggacaatgttttcatccttgcgagcctgaag
ctgcagaacaaagctccaacacgtgtcttccgcatcttcaatgctgcagataacacagat
tattttgatttcactgttcaggggaaactcaacaaagtcattttgaaatatctgaaaagc
aacggaaaggttggaacagcaaatttcggtaaagtgacaatgacagatggtcaacaacac
cacatactgctccacttcagcgggctgcagcagggcacccccaccacggctctctatgtg
gactgcaggctggtggagagagtgcaggacgtgccactggcctttaaatcactgcccgag
ggcccaaaacgagtcacactgaagaccctgccaacctcatcccaggataagctgtcagac
cttagactcgtgctcgatgagtctattgataatgtcgtggagcttcaggactgcagtggt
tcagagctgagtgaagagagagaaacactgcaactactaggaacaacctcaaagatggaa
gctggcccaatgtttgagctcatgcgaatgatccaagagttgaaacagaaggtggatcag
cagactaaagaaactgctgacctgaaaaagattatcttggagtgtgttccatgcagtgtg
ggaccggaccatgcagcactacaaaataaaaatcagtccaagtgtaaaccaggggtctgc
tttacgccagccatgtgtatcgaaacagctgaaggtgtggactgtgcaccctgtcctgag
ggctacactggagatggagtccggtgtgatgatgtagatgagtgccagttcaacccatgt
ttctctggtgtacggtgtattaacactgcgccagggttcagatgtgagaagtgtccacaa
ggtttctctggcctagagatccagggtgtgggcattcactatgctcaggcaaacaaacaa
atctgtaatgatattgatgagtgccaggtggataacggtggttgcacacccaattcatac
tgccataacacagtgggtgcgtttcattgtgggaactgcaagaccggattcaagggtgac
cagaatactggctgcaaaagtactggcctgggccctgctcctgtatctgacaggctgtgt
gggaacggccaaccaaatccatgtgacatcaacgcagagtgtattgtggagagagatgga
agcaccagctgtgtgtgccaaattggctgggcaggaaatggctacgtctgtggaaaagac
actgacattgacgcctatccagataataaacttcaatgcagagatggaacctgcaagaag
gataactgcatgtttgttccaaattcgggccaagaagatgcagacagagatgggaaggga
gacgcctgtgatgtggatgcagatagtgatggcatctataatgatcaggacaactgctgg
ttggtacctaacatagaccagaagaacagtgataaagatctccatggtgacgcttgtgat
aactgcataaacgtggagaacccggaccagcgggacacggacaaggacggactgggagat
gcctgtgatgatgacatagatggagatggtttgaagaacatcttggataactgtcagagg
gttccaaaccctgaccagaaggacaaagataatgatggtgttggtgatgcatgtgacagc
tgccctgagatgccaaaccccaaccagtctgatgttgatgatgatcttgttggagacact
tgtgacacaaacattgacagtgatggagatggtcatcagaacaccaaagacaactgcccc
aacgtcattaacagctcacagctggacactgataaagacgggctcggggatgagtgtgat
gacgacgatgataatgatggcatcttggatgataaagataactgtagactggtggcaaac
ccagaccagaaggatgaaaacaatgatggggtgggtgacgcctgcactggagactttgac
aaagatcacgtgatagacattatcgacacctgccctgagaatgcagagatcactctgacc
gacttcagagcatatcagactgtggttctggatccagaaggagaggctcagatcgacccc
aactgggttgttctcaatcaggggatggagattgtccaaaccatgaacagtgacccagga
ctagctgttggatacacagcattcagtggcgtggacttcgagggaaccttccatgtgaat
acagttaccgatgacgactacgcaggcttcatctttggctaccaggattcctccagcttc
tatgtggtgatgtggaagcagacggagcagacttactggcaggctgtgccctttagagcc
gtggctgagcctggcattcagcttaaggttgtaaagtctaaaactgggcctggagagttc
ctgaggaattcactgtggcacactggagatacaaacgaccaggtgcgtttgctgtggaaa
gaccctcgtaatgtgggctggaaagacaaggtgtcctaccgctggaatctgaagcacaga
ccccaagtgggatacatcagagtaaggttctatgaaggtaccgacttggttgcggactct
ggagttattattgacactagcatgagagggggccgtctcggtgtcttctgcttttcacag
gaaaatatcatctggtccaacctgaaatatcgctgtaacgacacaatccctgaagacttt
acagaggaacaagcccagcagtaa
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