Megalobrama amblycephala (Wuchang bream): 125267760
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Entry
125267760 CDS
T08212
Symbol
clip1a
Name
(RefSeq) CAP-Gly domain-containing linker protein 1 isoform X1
KO
K10421
CAP-Gly domain-containing linker protein 1
Organism
mamb
Megalobrama amblycephala (Wuchang bream)
Pathway
mamb04150
mTOR signaling pathway
Brite
KEGG Orthology (KO) [BR:
mamb00001
]
09130 Environmental Information Processing
09132 Signal transduction
04150 mTOR signaling pathway
125267760 (clip1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
mamb03036
]
125267760 (clip1a)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
mamb04812
]
125267760 (clip1a)
Chromosome and associated proteins [BR:
mamb03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Microtubule-associated proteins
125267760 (clip1a)
Cytoskeleton proteins [BR:
mamb04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Cytoplasmic linker proteins (CLIPs)
125267760 (clip1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CAP_GLY
CLIP1_ZNF
PUMA_CC
FliJ
Motif
Other DBs
NCBI-GeneID:
125267760
NCBI-ProteinID:
XP_048045642
LinkDB
All DBs
Position
LG4:complement(48473054..48529234)
Genome browser
AA seq
1557 aa
AA seq
DB search
MSTSKPSGLKAPSKIGRPANAGVAKTSSSAGASKPTQSDKSSAEAQDGGEQFKIGDRVWV
NGNKPGVVQFLGETQFAPGQWAGIVLDEPIGKNDGSVSGVRYFQCEALKGIFTRPSKLSR
TEGEADETTTAPPSRAASPTPSNASVSASTKKPATPTKTAPPASDLVRSKSESVSNLSES
GSVKKGDRELKINDRVLVAGSKAGVVRFLGETDFAKGEWCGVELDEPLGKNDGAVAGTRY
FHCQPKYGLFAPVHKVTRIGFPSTTPAKAKTTVRKTSTTPGGLKRSPSASSISSMSSVAS
SASCKPSRTGLLTETSTRYARKISGTTALQEALKEKQQHIEQLLAERDLERAEVAKATSH
VGEVEQELTLLREGQEQYVLEVDAKMDQLRALVEAADREKVELLNQLEEEKRKVEDLQFR
VEEACITKGDLETQTQLEHALLKELEQSLLFEKTKADKLQRELEDSRVATVSEKSRILEL
ERDLTLRDKEVASLRKSLEAVPGQDGFPDSIVASLQDELCSLRTQLATQSDSHQAELSSL
REMLESREKAHSESLSELQSASGRLSKDNEQLLGQLAKSEEENSKIIEQCHAKLASVEAS
HQQVLEELKASHKAGEIELRNSLEQLKLTHKLELEELSNKYASQAIGRTSESKEHEAQLL
RVTEEKEQLIESLRTNLEKVEEQHLVELEDALGKLHNAEIRVKELEDTGAKLSQQLHEKE
QEALGQSSALQTLQSQHSQGNQEMQRLLTQIEEAKSKARSQEEKVTGLNSVLEVKQQELN
GLLQEKSSLEQEVSVLKQNLEKTSNDQAKSSQTNQELREELRNKDEQCTSLSAELQDMKS
QFAGLQRNLKTSEERCLLLTKDKTKLENDIMDMSKSSGDNSTLITKLNEEINRKERTLEE
LQNQLAEEKERAAQAEESHSLAQVQAEKEAKTLTQKHQAELSNLQEKIKLLEKSAEDNQA
KAKDMHALGEKALADAVEHHSKEMQELHSKFEKVQQELSVSQDESSELKKQIEELMTFKE
KAAASEKAEQTAQASLEQLTQDNHQLQKDKSETEALVTQLKNVMQEMQGKLDALTKQNSE
YQENLTSDGQKISSLSKEIEELKQEVTVKTQAVDDLKNEKEKLTMELASSHKDSDILLNL
KKESDSLNDQLKEMKMRESTLRSESEKEKEALQQSLQTQSALISEKCKELDSLRNKLDAL
TKQNSEYQENLSSNSERISSLSKEIEELKQAAAEKTQAVDDLKNEKEKLTMELASSHKDS
NILLNLKKECDNLNDQLKEMKMRESTLTSESEKEKAALQQSLQTQSALISEKDKELDSLR
NELEKERDSLNSQLKKIKMRESTLTKETEKEKAALQQSLQTQSALISEKDKELDSLKNEQ
ITSLRSNLKSHKIENAQLQERLKGLERSLADIQITSRVDDASDDSASKTLREAKENAEHQ
VEFLNTVIVDLQRKNEDLKSKLEKMAEAALNGNGAAEMDRHNSHAEPIKKKPPPRLFCDI
CDCFDLHDTEDCPTQEQMLDSPPHTTYHGSPNDERPYCDICEVFGHWTDSCNDDQTF
NT seq
4674 nt
NT seq
+upstream
nt +downstream
nt
atgagcacatcaaaacccagtggactcaaagcgcccagcaaaatcggtagaccagccaat
gctggggtcgcgaagacatcatcttctgctggtgcttctaaaccaactcaaagcgacaaa
tcctcagccgaagcccaagatggaggcgagcagttcaagatcggggatcgtgtctgggtt
aatggcaacaagccaggcgtcgttcagtttttaggagagacccagtttgctccgggccaa
tgggctggcattgtgctcgatgagccaatcggcaaaaatgatggttcggtgtctggtgtg
cgctattttcagtgtgaagcattaaagggtattttcacacgtccctccaagctttcacgc
actgaaggtgaggcggatgagacaaccacggctcctccgtctcgtgcggcgtcacctacc
ccctctaatgcatcagtatctgcttcaaccaagaaaccagccacacccactaaaacagct
ccgcctgcctcagatctggtgcggtcgaaaagtgaatcggtgtccaatctgtcagagtct
ggttctgtcaagaaaggggatcgggagctgaagatcaatgatcgagtgctggttgctggc
tcaaaagctggtgtagtgcgtttcttaggcgaaaccgattttgctaagggtgaatggtgt
ggagttgagctggatgagcccttgggaaagaacgatggtgctgtggctggaaccaggtat
ttccattgtcagcccaagtatggcctctttgcgccagtgcacaaggtgacccgtataggc
tttccctcgactaccccagcgaaggcaaagaccactgtgaggaagacatcgaccacacca
ggaggactgaaacgtagccctagtgcctcctccatcagctccatgagctctgtggcctct
tctgctagttgcaagccaagccgtacaggactgttgacagagacgtccacaaggtatgcg
aggaagatctctggcactacggcacttcaggaggccctgaaggagaaacagcaacacatt
gagcaactcctggcagagcgtgacctggagagagctgaggttgccaaggcaaccagccat
gtgggcgaagtggagcaggagcttacgttactaagagaaggccaggagcagtatgtgttg
gaggttgatgccaaaatggaccagctgcgagcgcttgtggaggctgcagacagagagaag
gtggagctgctcaaccagctggaggaggagaagaggaaggtggaggacctgcaatttcgg
gtggaggaagcttgcattaccaaaggagatttggagacgcagacgcagctggagcatgcc
ctcctaaaggagcttgaacagagtcttctatttgaaaaaaccaaagctgacaaacttcag
agggagttagaagactctagggtggccacagtctctgagaagtctcgtatcttggagttg
gagcgggatcttacattaagagataaggaggtagcttctcttcgcaagtcattggaagct
gtgccaggccaggatgggtttcctgactctatcgtggcatcactccaggacgagctctgt
tccctccgtacgcaactggccactcaaagcgacagtcaccaagcagagctatcgtctttg
cgtgagatgcttgagtctcgagaaaaagcacacagtgaatccttgtcagagctccagtca
gcctcaggtcgcttgtcaaaggataatgagcagcttttaggtcagctggcaaaatctgag
gaggagaactcaaaaatcattgagcagtgccatgctaaactagcatcagttgaggcctca
caccagcaagtcttggaggagctcaaagcctcccataaagcaggcgaaatcgagctacgt
aattctctggaacagttaaaattgacacacaagctggagctcgaggagctctctaacaag
tatgcttctcaagccatagggaggacgagtgaatccaaagaacatgaggcacaactcctg
agagtcactgaagagaaggagcaactgatagaatctctacgcaccaatctggagaaggtg
gaggagcagcacctggtggaattggaggatgccttgggaaaacttcacaatgctgagatc
agggtaaaagagttggaggacacaggagctaagttaagtcaacagttgcatgaaaaggag
caagaagctctggggcaaagttcagcccttcagactctacagtcacagcacagtcaagga
aaccaagagatgcaaaggttattgacccaaatagaggaggcaaaaagtaaagccagatct
caggaagaaaaggtcactgggttgaactcagtactagaggttaaacagcaagagttgaat
ggcctgttgcaggaaaagagctctttggagcaagaagttagtgtgctgaaacagaatctt
gaaaaaacatctaatgaccaagccaaatcttctcagactaatcaagagttacgcgaggag
ctcaggaataaagacgaacaatgcacatctctttctgctgaattacaggatatgaagagt
caatttgctggtttacaaagaaatttgaaaacaagtgaagaaaggtgcctgctgctgacc
aaagacaaaactaaacttgaaaatgacattatggacatgtcaaaatcatcgggagacaat
tctactctaataacaaagctgaatgaggaaatcaatcggaaagagaggacactagaggag
cttcagaaccagcttgcagaggagaaggagagggcagctcaggctgaggagagtcattct
ctagcacaagtccaggctgagaaggaagccaaaactctcacgcagaagcaccaagcagag
ctttccaacctacaggagaaaatcaagcttttggagaagagcgctgaagacaatcaggct
aaagccaaagacatgcatgcattgggagagaaagcgcttgcagatgctgtggaacatcat
tctaaagaaatgcaggaattacacagcaagtttgaaaaagtacaacaggagctcagcgtg
tctcaggatgaaagctcggagctgaagaaacagatcgaagagttgatgaccttcaaagaa
aaagctgcggcctcagagaaagcagaacagactgcacaggcctcgttggagcagttgacc
caggataaccaccagcttcagaaagacaagtctgagactgaggctctggtgacacagctc
aaaaacgtaatgcaagaaatgcagggcaagctggatgctctaacgaagcagaactcagag
tatcaagagaatctgacttctgacggtcagaagatcagcagcctcagcaaagagattgag
gagttaaaacaagaagtcactgtaaaaacccaggcagtggatgatctgaaaaatgagaag
gaaaagttaaccatggaacttgccagcagccacaaagacagtgacattctactaaatctc
aaaaaggagtctgacagtctcaacgatcagttgaaggagatgaaaatgagggaaagcact
ttgagaagtgaatctgaaaaggagaaagaagcacttcaacagtctctccaaacacagagt
gccttgatctcagaaaagtgcaaagaattagactctctgagaaataagctggatgctcta
acgaagcagaactcagagtatcaagagaatctgagttctaacagtgagaggatcagcagc
ctcagtaaagagattgaggagttaaaacaagcagctgctgaaaaaacccaggcagtggat
gatctgaaaaatgagaaggaaaagctaaccatggaacttgccagcagccacaaagacagc
aacattctactaaatctcaaaaaggagtgcgacaacctcaatgatcagttgaaggagatg
aaaatgagggaaagcactttaacaagtgaatcagaaaaggagaaagcagcacttcagcaa
tctctccaaacacagagtgccttgatctcagaaaaggacaaagaattagactctctgaga
aacgagctcgaaaaggagcgtgacagcctcaacagtcaattgaagaagataaaaatgagg
gaaagcactttaacaaaagagacagaaaaggagaaagcagcacttcagcaatctctccaa
acacagagtgccttgatctcagaaaaggacaaagaattagattctctgaaaaatgagcag
ataacaagtctgcggtccaatctgaaatcacacaagattgagaatgctcagctgcaggag
cgactgaagggtctcgagaggagtctagctgacattcagatcaccagcagggtagatgac
gcctcagatgattctgcctcaaaaacattgagggaggcaaaggagaatgctgagcatcag
gttgaattcctgaacacggttattgtggatctgcagcggaagaacgaagacctaaaatcg
aaactagagaaaatggctgaagcagcgctcaatggaaacggtgcagctgaaatggaccgt
cataacagtcacgctgagccgattaaaaagaaaccccctccccgtctcttctgtgacata
tgcgactgtttcgacctacacgacaccgaagactgtcccacccaggaacagatgctagat
tccccgccgcacaccacctaccacggcagtcccaacgacgaacgaccttactgtgacatc
tgtgaggtctttggccactggacagattcctgcaatgacgatcaaactttctag
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integrated database retrieval system
