Megalobrama amblycephala (Wuchang bream): 125267817
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Entry
125267817 CDS
T08212
Symbol
usp39
Name
(RefSeq) U4/U6.U5 tri-snRNP-associated protein 2
KO
K12847
U4/U6.U5 tri-snRNP-associated protein 2
Organism
mamb
Megalobrama amblycephala (Wuchang bream)
Pathway
mamb03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
mamb00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
125267817 (usp39)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
mamb03041
]
125267817 (usp39)
Spliceosome [BR:
mamb03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP specific factors
125267817 (usp39)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
zf-UBP
UCH_1
zf-UBP_var
Motif
Other DBs
NCBI-GeneID:
125267817
NCBI-ProteinID:
XP_048045773
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All DBs
Position
LG4:complement(50275900..50288602)
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AA seq
497 aa
AA seq
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MIAGVKRERDVDEDEDEEVRVKFGRSHVEDRRSRHCPYLDTINRSVLDFDFEKLCSISLS
HINVYACLICGKYFQGRGQKSHAYIHSVQFTHHVFLNLHTLKFYCLPDNYEIIDSSLEDI
TYVLKPTFTKQHISGLDKQGKLYRAYDGTTYLPGIVGLNNIKANDYANVVLQALSNVPPL
RNYFLEEDNYRGIRRPPGDIMFLLVQRFGELMRKLWNPRNFKAHVSPHEMLQAVVLCSKK
NFQITKQGDAVDFLSWFLNALHGALGGTKKKSSILTKVFQGSMRIFSKKLPHPDLPAEEK
EALLLKEEYQEEMSESTFLYLTLDLPTAPLYKDEKEQLIIPQVPLFNILGKFNGNTEKEY
KTYKENFLKKFQLTKLPPYLIFCIKRFTKNNFFVEKNPTIVNFPITNVDLREYLTEEAQA
TEKVTTYDLVANVVHDGKPTEGSYRIHVLHHGTGKWYELQDLQVIDILPQMITLSEAYIQ
IWKRQDKDDGAESHSGA
NT seq
1494 nt
NT seq
+upstream
nt +downstream
nt
atgatcgcaggcgtgaaacgggagagggacgttgatgaagatgaagatgaagaggtgcgt
gtgaaattcggtcgatctcatgttgaagatcgcagaagccgccattgtccatatctggac
acaattaacaggagtgttttggatttcgacttcgagaagctttgttcaatctctctttca
cacattaatgtctatgcctgtctgatttgtgggaaatatttccaaggtcgaggtcagaag
tctcatgcgtacatccacagcgttcagttcacacatcatgttttcctgaatctccacacg
ttaaagttctactgcctgccagacaattatgagatcattgactcctcattagaggacatt
acgtatgtgctgaaacccacattcaccaagcagcacatctctggtttggataagcaggga
aagctgtacagagcctacgatggcacaacatatttgcctggaattgtgggtctcaataat
atcaaggccaatgactatgctaatgtggttttgcaggcgctgtcaaatgtgccccctttg
cgaaactacttcctcgaggaggacaactatcgtggaattcgtcggccaccgggtgacatc
atgtttctgctggtgcagcgtttcggggagctcatgcgcaagctgtggaacccgcggaac
ttcaaagcccacgtatcaccacatgaaatgttgcaggctgtggtgttgtgcagtaaaaag
aactttcagatcactaagcaaggggatgctgttgactttctctcctggttcctgaatgca
ttgcatggtgctcttggtgggacaaagaagaaatcatccattctcaccaaggtgtttcag
gggtccatgcggatcttctcaaagaagcttccccatcctgatttgcctgctgaagagaaa
gaagcccttctccttaaggaggagtaccaggaggagatgtcggagtccacttttctgtac
ctgacccttgacctgcccaccgcacccctctacaaagatgagaaggagcagctcatcatt
cctcaggttcctctcttcaacatcctgggcaagttcaatggaaacactgagaaggagtac
aagacctacaaagagaactttctgaaaaagttccagctcaccaaacttcccccatacctc
atcttctgcatcaaacgattcacaaagaacaacttctttgtcgagaagaaccccaccatc
gtcaacttccccatcacgaatgttgatttgcgcgagtacctcacagaagaggcgcaggct
accgagaaggtcaccacctacgacctggtggccaatgtagttcatgatggaaaacccact
gagggttcctatagaattcatgttctgcatcatggcacagggaagtggtatgaacttcag
gacctgcaggtgattgacatcctcccacagatgatcacactctcagaggcgtacatacag
atttggaagagacaagataaagatgatggagcagaaagccattcaggggcatag
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